FFCP PHASE1:Hg19::chr18:13611819..13611868,+: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
Line 1: | Line 1: | ||
{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=753 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=1224 | |||
|TSSclassifier=strong | |||
|UniProt= | |||
|association_with_transcript=0bp_to_uc002ksg.1_5end | |||
|coexpression_cluster_id=C4 | |||
|description=CAGE_peak_2_at_C18orf1_5end | |||
|id=chr18:13611819..13611868,+ | |||
|ontology_enrichment_celltype=CL:0002057!3.17e-31!42;CL:0000860!4.85e-28!45;CL:0000763!5.25e-23!112;CL:0000049!5.25e-23!112;CL:0000037!2.18e-22!172;CL:0000566!2.18e-22!172;CL:0000988!7.63e-22!182;CL:0002009!1.03e-20!65;CL:0000557!1.23e-19!71;CL:0002032!3.96e-19!165;CL:0000837!3.96e-19!165;CL:0002194!4.17e-19!63;CL:0000576!4.17e-19!63;CL:0000040!4.17e-19!63;CL:0000559!4.17e-19!63;CL:0000738!7.76e-18!140;CL:0000839!2.78e-17!70;CL:0000766!1.17e-16!76;CL:0002087!1.17e-14!119;CL:0002031!9.27e-14!124;CL:0002393!1.27e-07!9;CL:0002397!1.27e-07!9 | |||
|ontology_enrichment_celltype_v019=CL:0000860;4.93e-29;33!CL:0002057;4.93e-29;33!CL:0000473;5.34e-21;39!CL:0000234;5.34e-21;39!CL:0000576;9.70e-19;48!CL:0000766;1.95e-13;69!CL:0000763;7.12e-07;100 | |||
|ontology_enrichment_celltype_v019_2=CL:0000860,1.66e-37,42;CL:0002057,1.66e-37,42;CL:0000473,1.67e-33,48;CL:0000234,1.67e-33,48;CL:0002009,4.75e-29,61;CL:0000557,2.57e-27,67;CL:0002194,2.19e-26,59;CL:0000576,2.19e-26,59;CL:0000040,2.19e-26,59;CL:0000559,2.19e-26,59;CL:0000839,1.64e-22,66;CL:0000766,2.03e-22,72;CL:0000763,3.72e-22,108;CL:0000049,3.72e-22,108;CL:0000037,6.70e-15,168;CL:0000738,7.28e-15,136;CL:0000988,3.27e-14,177;CL:0002032,1.36e-13,161;CL:0000837,1.36e-13,161;CL:0002031,7.68e-13,120;CL:0002087,6.39e-12,115;CL:0002393,1.03e-07,9;CL:0002397,1.03e-07,9 | |||
|ontology_enrichment_development_v019=CL:0002057;4.33e-27;42!UBERON:0006601;8.36e-10;82!CL:0000049;2.08e-07;108 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007023!1.07e-40!115;UBERON:0001049!5.21e-30!57;UBERON:0005068!5.21e-30!57;UBERON:0006241!5.21e-30!57;UBERON:0007135!5.21e-30!57;UBERON:0002616!1.62e-23!59;UBERON:0002780!8.69e-23!41;UBERON:0001890!8.69e-23!41;UBERON:0006240!8.69e-23!41;UBERON:0002020!3.20e-22!34;UBERON:0003528!3.20e-22!34;UBERON:0001893!3.43e-22!34;UBERON:0003080!6.24e-22!42;UBERON:0002791!3.01e-21!33;UBERON:0000955!5.66e-21!69;UBERON:0006238!5.66e-21!69;UBERON:0001017!2.81e-20!82;UBERON:0001869!3.88e-20!32;UBERON:0005743!3.03e-19!86;UBERON:0003075!6.77e-19!86;UBERON:0007284!6.77e-19!86;UBERON:0002390!1.79e-18!102;UBERON:0003061!1.79e-18!102;UBERON:0002346!3.09e-17!90;UBERON:0000073!8.75e-17!94;UBERON:0001016!8.75e-17!94;UBERON:0001474!1.45e-16!86;UBERON:0002371!2.10e-16!80;UBERON:0002193!2.80e-16!112;UBERON:0002619!3.07e-15!22;UBERON:0004765!5.73e-14!101;UBERON:0001434!5.73e-14!101;UBERON:0000956!9.13e-14!25;UBERON:0000203!9.13e-14!25;UBERON:0001950!1.74e-13!20;UBERON:0003056!6.07e-12!61;UBERON:0002308!1.46e-10!9;UBERON:0000125!1.46e-10!9;UBERON:0002405!3.15e-10!115;UBERON:0003076!3.52e-09!15;UBERON:0003057!3.52e-09!15;UBERON:0000153!1.34e-08!129;UBERON:0007811!1.34e-08!129;UBERON:0009663!1.82e-08!7;UBERON:0000033!2.60e-08!123;UBERON:0002420!5.93e-08!9;UBERON:0007245!5.93e-08!9;UBERON:0010009!5.93e-08!9;UBERON:0010011!5.93e-08!9;UBERON:0000454!5.93e-08!9;UBERON:0004732!1.52e-07!13;UBERON:0002298!1.67e-07!8;UBERON:0000200!4.05e-07!6 | |||
|ontology_enrichment_uberon_v019=UBERON:0001893;7.67e-30;34!UBERON:0003528;2.42e-29;34!UBERON:0002020;2.42e-29;34!UBERON:0002791;1.46e-28;32!UBERON:0001869;2.02e-28;32!UBERON:0002780;5.54e-26;41!UBERON:0001890;5.54e-26;41!UBERON:0002619;2.90e-24;22!UBERON:0000073;3.46e-24;53!UBERON:0002616;3.46e-24;53!UBERON:0001950;2.80e-21;20!UBERON:0000956;8.66e-21;25!UBERON:0000203;8.66e-21;25!UBERON:0000125;4.41e-17;9!UBERON:0002308;4.41e-17;9!UBERON:0001017;1.10e-16;75!UBERON:0000955;1.31e-16;68!UBERON:0009663;1.88e-13;7!UBERON:0001016;2.29e-13;83!UBERON:0002420;5.10e-13;9!UBERON:0007245;5.10e-13;9!UBERON:0010009;5.10e-13;9!UBERON:0010011;5.10e-13;9!UBERON:0000454;5.10e-13;9!UBERON:0002298;2.06e-12;6!UBERON:0000200;4.39e-11;6!UBERON:0004732;6.96e-11;13!UBERON:0004733;2.83e-09;12!UBERON:0002028;2.83e-09;12!UBERON:0007023;4.07e-09;114!UBERON:0000369;6.86e-08;4!UBERON:0002435;6.86e-08;4!UBERON:0000204;6.86e-08;4!UBERON:0000988;3.93e-07;3!UBERON:0001896;6.26e-07;3!UBERON:0005290;6.26e-07;3 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001049,1.18e-48,56;UBERON:0005068,1.18e-48,56;UBERON:0006241,1.18e-48,56;UBERON:0007135,1.18e-48,56;UBERON:0000073,6.42e-44,53;UBERON:0002616,6.42e-44,53;UBERON:0000955,7.99e-37,68;UBERON:0006238,7.99e-37,68;UBERON:0001017,3.58e-36,81;UBERON:0002780,9.90e-36,41;UBERON:0001890,9.90e-36,41;UBERON:0003080,9.90e-36,41;UBERON:0006240,9.90e-36,41;UBERON:0003528,3.05e-35,34;UBERON:0002020,3.05e-35,34;UBERON:0001893,3.41e-35,34;UBERON:0001016,4.67e-33,89;UBERON:0002791,8.39e-32,32;UBERON:0001869,1.13e-31,32;UBERON:0003075,5.82e-31,82;UBERON:0007284,5.82e-31,82;UBERON:0002346,6.69e-29,86;UBERON:0007023,3.39e-26,114;UBERON:0002619,2.85e-24,22;UBERON:0010371,5.99e-23,104;UBERON:0003056,9.02e-23,61;UBERON:0002371,9.20e-23,76;UBERON:0001950,2.99e-21,20;UBERON:0000956,8.54e-21,25;UBERON:0000203,8.54e-21,25;UBERON:0001474,2.71e-20,82;UBERON:0002405,1.12e-17,93;UBERON:0004765,1.58e-17,90;UBERON:0002390,2.50e-17,98;UBERON:0003061,2.50e-17,98;UBERON:0000125,3.80e-17,9;UBERON:0002308,3.80e-17,9;UBERON:0001434,4.32e-17,100;UBERON:0010314,2.08e-15,132;UBERON:0002193,1.06e-14,108;UBERON:0003076,1.18e-13,15;UBERON:0003057,1.18e-13,15;UBERON:0009663,1.60e-13,7;UBERON:0002420,4.70e-13,9;UBERON:0007245,4.70e-13,9;UBERON:0010009,4.70e-13,9;UBERON:0010011,4.70e-13,9;UBERON:0000454,4.70e-13,9;UBERON:0002298,2.08e-12,6;UBERON:0004121,1.11e-11,171;UBERON:0000924,1.11e-11,171;UBERON:0006601,1.11e-11,171;UBERON:0000200,3.40e-11,6;UBERON:0004732,6.91e-11,13;UBERON:0004733,2.82e-09,12;UBERON:0002028,2.82e-09,12;UBERON:0007277,2.82e-09,12;UBERON:0000369,5.75e-08,4;UBERON:0002435,5.75e-08,4;UBERON:0000204,5.75e-08,4;UBERON:0010082,5.75e-08,4;UBERON:0000988,3.95e-07,3;UBERON:0011216,4.22e-07,223;UBERON:0001896,6.28e-07,3;UBERON:0005290,6.28e-07,3;UBERON:0010096,6.28e-07,3;UBERON:0000025,8.90e-07,192 | |||
|phase1_expression=0.181678379270557,0,0.281908808191942,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.286235987131057,0,0,0.0764134057479513,0.328402357799783,0.157421562627358,1.18009283054671,0.767658796194425,1.23852898652861,0,0,0,0,0,0.587200878669695,3.32397245119126,1.20326668482085,1.95309783644267,0,0,0,0.726991193897824,1.13362783106643,1.4555043671269,1.62700325833979,2.46700732813095,1.85823822537062,1.43846196161075,1.7931249457037,4.02019790810595,4.82643953031266,2.5819387343353,4.06279459783025,1.88242339542605,0.818718450173537,2.24723484445085,4.89734227793444,4.17207735198922,5.11469700639233,0.989553900560148,1.39624560335142,1.27867425159808,8.12585868160035,2.26954089876456,2.4912889959823,4.01997864410789,5.73631210262222,4.77815458351257,7.26479403160043,5.15588690382591,5.37986058649504,1.47878700418359,1.06302149982522,0.838634582033504,0.22465726229299,0.750884464207532,0,3.42015292489498,1.19350006319454,0.730656615058536,0,0,0,0,0.400395987036012,0,0.661044872784862,0,0,1.76171156811282,0.764546456250458,0,1.68152568894461,0.790152254325231,0,0,0,0,0,0,0,0.111410456885174,0,0,0,0,0.260118695119756,0,0,0,0.14828656316206,0,1.04535523804977,0,0,0,0.253019692019503,0,0,0,0,0,0,0,0,0.201606743224732,0,0,0,0,0,0,0,0,0.795285947051099,3.40644409211845,0,0,0,2.0956652079634,0,0,0,0.174129737299267,0,2.38490624305342,1.14398982156026,4.08603251462521,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.496971951695318,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.206651562351531,0,0,0,0,0,0.125118519871964,0,0,0,0,0,0.358779271377724,0,0,0,0,0,0,0.168776332241266,0.292311015483596,0,0,0,0,0.10075209822764,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,7.06340959063441,0,0,0,0,0,0,0,0,0,0,0,0.288732895522148,0,0,0,0,0,0,0.297262324577456,0,0,0,0,0,0,0,0,0,0,0.12624243342638,0,0,0,0,0,0,0.285826432630578,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.2162378064119,0,0,0,0,0,0,0,0,0,0.197030760201927,0.215627574859517,0.128343036279748,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.413536052245775,0.215714200818617,0.533637789017222,0,0,0,0.248107807818777,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.438519753291869,0,0,0,0,0.206082023295445,0.824125183365091,0.907604499126468,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.188287601553558,0,0,0,0,0,0.764637207142375,0,0.238231775457789,0,0,0,0,0,0,0,0.185803175125719,0.28853842595289,1.06712765022621,0.637705090915289,0.399158742865633,0.191505370132367,0.211673582723883,0.973865820823666,1.40398589056729,2.51058146936511,0.156679895773023,2.50634477090067,0,0.963528450622197,3.63239472943886,0,0,0,0,0,0.976940477010201,0,0,0.270455678475983,2.99764771198038,0,0,1.17206543417515,0,0,0,0,0,0,0,3.23539657744179,0,0.659215496907038,0,0.398495976502139,0,0,0,1.47701766553283,0,0,0,1.02314474045374,0.986434056369336,0,0,8.72399471485697,4.17456441728331,1.99613798001194,0,0,0,0,0,0,0,0,0,5.31444831488303,4.5826646677655,1.52581736317083,0.884634079449797,2.06883333267483,3.72955175161753,0,0,0.769502585037971,0,0,0,0,0,0,0,0,0.784901281975124,0,0,0,0,0,0,0,0,0,0,0,0,0,2.96521128680622,0.988511511572023,0.939797545549098,19.1419217665123,0,19.6782134409285,0,0,0,0,1.20990716048664,0,0.252746318513952,0,0,0,0,0,0,0,0,0,0,0,1.04836000945218,4.29965081179041,0,0,0,0.387956065953678,0,0.225980740780532,0,0,5.76128243198496,0,0,1.49417096317547,0,0,0,0,0,0,0,0,0,0,0,15.0105072177447,10.8155249324675,6.38732940334862,0,0,0.558564802544508,0.229160424011684,0.717873024576814,0.399358000997982,2.14613024068285,0.669514372325618,0.53746777989381,0,0,0,0,0,0,0,4.77137813885582,4.35850899557042,0,0,0,22.2724152635985,3.86900977278975,4.73846541932592,0,0.236417121897595,0.262272940674991,0,0,0,0,0.662091970365432,0,0,0,0,0,0.082092520749339,0,0,0,0,9.04980694530854,8.33065390978947,0,0,0.106787412567695,0.628817220398664,0.828478110694391,0,0,0.487170393523584,0,0,0.2506898940227,0.612691153526923,0,0,5.31640907980192,2.56255156294123,4.13130071331449,5.73409195690071,7.09945929835855,12.9160518118078,0,0,0,4.28198000317451,0,0,0,0,0.233713309847224,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.83904526531058,0.779441235357554,0.398594520940089,2.28991551958182,0,0,0,3.79976052124367,0.106691729694141,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.394308725006267,0,0,0,6.55138095983887,1.41696576325585,3.03304332208587,6.56372365570416,0.504143392443436,6.01668096438696,7.2664040534333,22.8431072414647,0,0,0,0,0,0,0.397832444232549,0.376051641746286,0,0,0,0,0,5.87576986180033,2.34323429584154,4.13373593002368,6.21474939900287,0,0,1.48863353516788,0,0,0,0,0,0.227662191351298,0.532214220975833,0,0,9.37982315080278,6.90614122409915,0,0,0.470958557103084,2.98519620840404,0,0,0,0,0.214429632529969,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.647428837187895,0.102662806856247,1.1598144313382,0.485710993059139,0,0.198950775161368,0,0,0,0,0.540219106755613,0,0,0.490296643507811,0,7.65603021748287,6.23797440686881,3.3812458206672,0,0.0939839179798536,0.386747327841463,1.29923502702408,0,0,0,2.19100916473955,0.458729283404541,14.620637481448,6.46863404992057,6.32320858775507,0,0,0,0,0,0,0,0.633492505057185,0,0,0,0,0.227336094654718,0,15.7542193497168,15.82524836687,0.426467963801962,0,0.710478008196067,0.372448285775147,0,0,0.202117188958219,0.435433495793923,0,0.0673520530145875,0.358611026963382,0,0,0,0,0,0,0.366724332548599,0.813792356631477,0,0.402547587182052,0 | |||
|short_description=p2@C18orf1 | |||
}} |
Revision as of 18:41, 20 January 2014
Short description: | p2@C18orf1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_2_at_C18orf1_5end |
Coexpression cluster: | C4_optic_corpus_substantia_medulla_spinal_thalamus_globus |
Association with transcript: | 0bp_to_uc002ksg.1_5end |
EntrezGene: | C18orf1 |
HGNC: | 1224 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
classical monocyte | 1.66e-37 | 42 |
CD14-positive, CD16-negative classical monocyte | 1.66e-37 | 42 |
defensive cell | 1.67e-33 | 48 |
phagocyte | 1.67e-33 | 48 |
macrophage dendritic cell progenitor | 4.75e-29 | 61 |
granulocyte monocyte progenitor cell | 2.57e-27 | 67 |
monopoietic cell | 2.19e-26 | 59 |
monocyte | 2.19e-26 | 59 |
monoblast | 2.19e-26 | 59 |
promonocyte | 2.19e-26 | 59 |
myeloid lineage restricted progenitor cell | 1.64e-22 | 66 |
myeloid leukocyte | 2.03e-22 | 72 |
myeloid cell | 3.72e-22 | 108 |
common myeloid progenitor | 3.72e-22 | 108 |
hematopoietic stem cell | 6.70e-15 | 168 |
leukocyte | 7.28e-15 | 136 |
hematopoietic cell | 3.27e-14 | 177 |
hematopoietic oligopotent progenitor cell | 1.36e-13 | 161 |
hematopoietic multipotent progenitor cell | 1.36e-13 | 161 |
hematopoietic lineage restricted progenitor cell | 7.68e-13 | 120 |
nongranular leukocyte | 6.39e-12 | 115 |
intermediate monocyte | 1.03e-07 | 9 |
CD14-positive, CD16-positive monocyte | 1.03e-07 | 9 |