FFCP PHASE1:Hg19::chr17:74379317..74379362,+: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=8877 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=11240 | |||
|TSSclassifier=strong | |||
|UniProt=Q9BTG7 | |||
|association_with_transcript=259bp_to_uc002jrg.1_5end | |||
|coexpression_cluster_id=C0 | |||
|description=CAGE_peak_3_at_SPHK1_5end | |||
|id=chr17:74379317..74379362,+ | |||
|ontology_enrichment_celltype=CL:0002371!9.17e-25!591;CL:0000144!4.19e-24!625;CL:0000012!1.98e-19!682;CL:0002057!1.35e-18!42;CL:0000548!2.12e-18!679;CL:0000004!2.12e-18!679;CL:0000255!2.12e-18!679;CL:0000860!4.01e-17!45;CL:0000003!2.34e-14!722;CL:0000048!1.48e-11!430;CL:0000766!4.11e-11!76;CL:0000723!4.85e-11!436;CL:0000034!7.65e-11!444;CL:0000055!1.69e-10!180;CL:0002194!4.50e-10!63;CL:0000576!4.50e-10!63;CL:0000040!4.50e-10!63;CL:0000559!4.50e-10!63;CL:0000222!1.03e-09!119;CL:0000557!1.34e-09!71;CL:0000063!1.58e-09!578;CL:0002009!2.12e-09!65;CL:0000839!4.14e-09!70;CL:0000359!1.00e-08!32;CL:0000071!1.27e-08!18;CL:0002546!1.27e-08!18;CL:0002139!2.72e-08!24;CL:0000183!3.40e-08!59;CL:0000115!9.76e-08!35;CL:0000187!2.82e-07!54;CL:0000057!4.79e-07!75;CL:0000192!9.35e-07!42;CL:0000514!9.35e-07!42 | |||
|ontology_enrichment_celltype_v019=CL:0000860;6.17e-27;33!CL:0002057;6.17e-27;33!CL:0000473;3.61e-17;39!CL:0000234;3.61e-17;39!CL:0000576;2.69e-13;48!CL:0000071;2.82e-09;18!CL:0000766;8.79e-09;69!CL:0000359;1.07e-08;32!CL:0002139;1.15e-08;24!CL:0000115;1.46e-07;36!CL:1000413;3.37e-07;9 | |||
|ontology_enrichment_celltype_v019_2=CL:0000860,4.07e-25,42;CL:0002057,4.07e-25,42;CL:0000473,4.98e-20,48;CL:0000234,4.98e-20,48;CL:0000766,6.53e-17,72;CL:0000048,1.34e-15,427;CL:0000723,4.51e-15,433;CL:0000034,5.50e-15,441;CL:0002194,8.62e-15,59;CL:0000576,8.62e-15,59;CL:0000040,8.62e-15,59;CL:0000559,8.62e-15,59;CL:0000557,1.09e-14,67;CL:0000839,2.03e-14,66;CL:0002009,7.54e-14,61;CL:0000134,2.23e-09,354;CL:0000359,2.81e-09,32;CL:0000071,3.22e-09,18;CL:0002546,3.22e-09,18;CL:0002320,5.84e-09,361;CL:0002139,1.22e-08,24;CL:0000115,1.25e-08,36;CL:0000222,3.84e-08,121;CL:0000219,7.83e-08,386;CL:1000413,3.65e-07,9;CL:0000763,4.23e-07,108;CL:0000049,4.23e-07,108;CL:0002078,9.85e-07,45 | |||
|ontology_enrichment_development_v019=CL:0002057;4.99e-19;42!CL:0002546;2.82e-09;18 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0003081!1.21e-28!216;UBERON:0004535!4.85e-20!110;UBERON:0004872!8.77e-20!84;UBERON:0001981!1.80e-19!60;UBERON:0007500!1.80e-19!60;UBERON:0004537!1.80e-19!60;UBERON:0006965!1.80e-19!60;UBERON:0000055!2.39e-19!69;UBERON:0001009!2.77e-19!113;UBERON:0002049!1.09e-17!79;UBERON:0007798!1.09e-17!79;UBERON:0003914!2.01e-16!118;UBERON:0001637!7.20e-16!42;UBERON:0003509!7.20e-16!42;UBERON:0004572!7.20e-16!42;UBERON:0000926!2.63e-13!448;UBERON:0004120!2.63e-13!448;UBERON:0006603!2.63e-13!448;UBERON:0004573!9.48e-13!33;UBERON:0004571!9.48e-13!33;UBERON:0002204!6.35e-12!167;UBERON:0000467!7.11e-11!625;UBERON:0000480!7.53e-11!626;UBERON:0002193!9.76e-10!112;UBERON:0000468!9.86e-10!659;UBERON:0002371!1.07e-09!80;UBERON:0002390!3.42e-09!102;UBERON:0003061!3.42e-09!102;UBERON:0001986!1.27e-08!18;UBERON:0004638!1.27e-08!18;UBERON:0004852!1.27e-08!18;UBERON:0000947!3.15e-08!21;UBERON:0010191!3.15e-08!21;UBERON:0004765!4.32e-08!101;UBERON:0001434!4.32e-08!101;UBERON:0000486!5.68e-08!82;UBERON:0001474!9.52e-08!86;UBERON:0002405!1.00e-07!115;UBERON:0000914!2.12e-07!83;UBERON:0002329!2.12e-07!83;UBERON:0003077!2.12e-07!83;UBERON:0003059!2.12e-07!83;UBERON:0007282!2.12e-07!83;UBERON:0009618!2.12e-07!83;UBERON:0007285!2.12e-07!83;UBERON:0004290!4.24e-07!70 | |||
|ontology_enrichment_uberon_v019=UBERON:0001637;3.33e-15;42!UBERON:0003509;3.33e-15;42!UBERON:0004572;3.33e-15;42!UBERON:0004573;5.41e-14;33!UBERON:0004571;5.41e-14;33!UBERON:0007500;2.20e-12;56!UBERON:0001981;2.20e-12;56!UBERON:0004537;2.20e-12;56!UBERON:0000055;4.22e-10;65!UBERON:0003914;1.43e-09;74!UBERON:0004638;2.82e-09;18!UBERON:0001986;2.82e-09;18!UBERON:0004852;2.82e-09;18!UBERON:0000947;3.70e-09;21!UBERON:0010191;3.70e-09;21!UBERON:0003915;3.37e-07;9!UBERON:0004700;3.37e-07;9!UBERON:0001917;3.37e-07;9 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0003081,2.93e-33,203;UBERON:0000926,1.25e-22,315;UBERON:0004120,1.25e-22,315;UBERON:0006603,1.25e-22,315;UBERON:0007500,3.00e-21,59;UBERON:0001981,3.00e-21,59;UBERON:0004537,3.00e-21,59;UBERON:0006965,3.00e-21,59;UBERON:0004872,1.19e-20,83;UBERON:0000055,3.64e-20,68;UBERON:0001637,1.25e-19,42;UBERON:0003509,1.25e-19,42;UBERON:0004572,1.25e-19,42;UBERON:0004535,1.00e-16,109;UBERON:0002049,3.64e-16,78;UBERON:0007798,3.64e-16,78;UBERON:0003914,4.01e-16,117;UBERON:0001009,1.06e-15,112;UBERON:0004573,3.78e-15,33;UBERON:0004571,3.78e-15,33;UBERON:0002371,2.59e-14,76;UBERON:0002204,2.65e-12,167;UBERON:0001474,4.05e-12,82;UBERON:0002390,8.04e-12,98;UBERON:0003061,8.04e-12,98;UBERON:0002193,1.33e-11,108;UBERON:0002405,1.87e-11,93;UBERON:0004765,4.88e-11,90;UBERON:0001434,1.68e-09,100;UBERON:0004638,3.22e-09,18;UBERON:0001986,3.22e-09,18;UBERON:0004852,3.22e-09,18;UBERON:0000947,9.20e-09,21;UBERON:0010191,9.20e-09,21;UBERON:0002384,1.98e-08,371;UBERON:0003915,3.65e-07,9;UBERON:0004700,3.65e-07,9;UBERON:0001917,3.65e-07,9;UBERON:0007503,3.95e-07,78 | |||
|phase1_expression=1.81678379270557,2.78330681058278,2.39622486963151,5.00366491765652,3.12872766099101,5.23403114460221,12.6649939084155,0,0.261185628199839,0.491467873003018,4.88460817580699,1.96597234917155,1.84636884759917,0.495065411840187,0.331397375727916,1.34465029290355,2.41077811209591,2.19093027116212,3.41552959153355,0.738726348460727,2.44800829493104,0.313454721478088,0.85870796139317,1.77936752594749,1.12988375635323,0,0,0,3.54027849164014,2.30297638858328,10.5274963854932,1.83884244895785,4.819294700452,1.47901604066715,0,0,0.587200878669695,25.4837887924664,30.6833004629317,29.5134784173558,0,0,0.257575567634187,6.10672602874172,8.69114670484262,7.76268995801012,11.8538808821899,23.4365696172441,22.9182714462377,40.8523197097454,41.2418737511852,38.5466034718394,24.4769433322999,36.7926269642781,32.502356782642,5.83551252582075,15.8285567033551,9.66310983113864,41.3213254700718,24.7115350848592,28.7701706609569,24.7388475140037,31.7147215618395,28.1308335351578,52.2376629531451,73.192693985157,48.5801354216549,32.4110778181199,38.5897359630949,28.01736096696,32.0861736395685,39.0374294146819,50.0010572156597,0.211255286311942,0.850417199860174,0.628975936525128,1.01095768031846,1.05123824989054,0.48217676009124,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.64342657158052,6.72610275577843,0.263384084775077,0,1.17903228824749,0,0,0,0,0,0,0,0,0,0.128091319725675,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.68280343881454,0.639312809217652,0,2.00535164254356,0.579386075843295,0,0.486634870302636,0.567208902984407,2.21729397462564,0.702678285545008,0.130979075497713,0.728590576585084,1.48313777113772,0.324547393654683,0,0.531831842075461,2.38490624305342,1.14398982156026,0,3.18019851786728,5.16140757063675,2.42998351125316,5.08777147731609,4.19499436209906,1.6507082516404,2.29894463190492,0.516833518338658,0,0.33472061276467,3.22263453687318,14.4451700086517,9.03029612928227,2.20597848207521,8.1014194788176,0.714397826272638,0.898117490504679,0.788280363383256,13.7984973719295,9.49265659568129,6.77846452542507,5.27121669744253,3.87780264148325,0.436094052142534,0.993943903390637,1.2663051166458,2.1185468930115,3.15520282823695,2.12801029319014,1.12135520028461,17.0798393167528,3.7000132262574,0.933633106199299,1.48181739276657,1.47115712802113,0.151357427644931,0,0.468642863667593,0.624320153660641,1.1409436430889,0.896692083310806,1.76151747965647,0.809364721840658,2.10676210053373,0.204154171254893,0.982674538494144,0.103325781175765,0,0.741800787835671,1.82032272387605,0.718618141816238,0.673344455816265,0.375355559615893,0.277064115484183,0.877955241761676,1.83892677479412,1.65261864797256,3.17610112848059,1.97328599257748,2.56268866582281,0.847727604638247,3.60109315301283,0.618315175430633,2.06112432036503,0.558350568994769,3.37552664482532,0.779496041289589,2.52433774244115,0.828449087780694,0.161646056818812,4.61512470271599,0.806016785821122,1.52604533079439,3.28543450377605,3.27295344709002,1.14721838155602,0,0,0.116193942869518,0.310983165046111,0,0,6.25798129319264,2.57296375277154,6.90674606762403,0.464367928031979,0,0.946454400318751,0.337169380156203,0.482022059766964,0.661763836394364,0.871517776369625,0.949082476444386,0.269662616320329,0.392442930250692,0.769494313892781,1.4763109092493,8.41450642820675,0.8231480226628,4.41026134156626,0,0,0,0,0,0.514703430895577,0.658501712451753,1.1240175325762,0.100528972411631,0,0.977424915930974,0,7.21656710126366,1.73895607462615,0.234817388471643,1.44366447761074,2.77791307545966,4.18559134916116,0.790204397959275,0,0,0.936017060556951,0,0.93733833986777,3.02367830757947,1.98485136139341,0.268675568108545,0.290633938513962,1.15014803749563,0,0,3.31724984865235,3.17063897517315,1.8936365013957,0.317489471460845,0.763976851116555,0,5.13217338068116,1.02827492703324,0.901029173531752,0,1.45770409648969,2.61576041299968,2.4935017179123,0.517086863031111,0,5.071816515336,0.26593811658487,0,1.02882949704857,1.41849132023278,1.3321108950805,0.428933980974443,0,1.64648067356154,4.23457039581856,0.355391948742546,1.58390374586686,0.602878754119172,0.871533458600294,0.99972991182057,0,0,0,0.718874566474748,1.14861935834114,1.42636905040718,0.144781306667579,0.410952645100767,0,0.112085143993527,0.788123040807709,0.215627574859517,1.54011643535698,0.508189248444927,0,4.63973287666617,0.502548796003046,5.74144876487847,0,0,0.828831026872071,0.12269149171914,0,0.542530047399471,0.623912584592421,1.07057393278297,0.315404830067869,0.35142424497814,0.601892199455438,0,2.0694614258501,1.32845119707087,3.87175253937577,0.260650843404249,0.587403472388222,3.43143423810856,0.82707210449155,3.45142721309787,5.44310544797566,5.75942385747893,13.3148351608398,9.37409909322009,0.496215615637554,2.76231551918512,2.80660094433074,0.896974044789907,1.02341449813341,1.60853921143608,1.48418066444991,2.92998418225046,3.37367278094941,1.31403449622095,1.03850885836724,1.85936605535935,0.120859449591622,1.80455823272956,0.184161977871793,0.114814448164607,0.182091168006717,0.26224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| |||
|short_description=p3@SPHK1 | |||
}} |
Revision as of 17:26, 20 January 2014
Short description: | p3@SPHK1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_3_at_SPHK1_5end |
Coexpression cluster: | C0_CD14_Eosinophils_Neutrophils_Basophils_CD34_immature_Peripheral |
Association with transcript: | 259bp_to_uc002jrg.1_5end |
EntrezGene: | SPHK1 |
HGNC: | 11240 |
UniProt: | Q9BTG7 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
classical monocyte | 4.07e-25 | 42 |
CD14-positive, CD16-negative classical monocyte | 4.07e-25 | 42 |
defensive cell | 4.98e-20 | 48 |
phagocyte | 4.98e-20 | 48 |
myeloid leukocyte | 6.53e-17 | 72 |
multi fate stem cell | 1.34e-15 | 427 |
somatic stem cell | 4.51e-15 | 433 |
stem cell | 5.50e-15 | 441 |
monopoietic cell | 8.62e-15 | 59 |
monocyte | 8.62e-15 | 59 |
monoblast | 8.62e-15 | 59 |
promonocyte | 8.62e-15 | 59 |
granulocyte monocyte progenitor cell | 1.09e-14 | 67 |
myeloid lineage restricted progenitor cell | 2.03e-14 | 66 |
macrophage dendritic cell progenitor | 7.54e-14 | 61 |
mesenchymal cell | 2.23e-09 | 354 |
vascular associated smooth muscle cell | 2.81e-09 | 32 |
blood vessel endothelial cell | 3.22e-09 | 18 |
embryonic blood vessel endothelial progenitor cell | 3.22e-09 | 18 |
connective tissue cell | 5.84e-09 | 361 |
endothelial cell of vascular tree | 1.22e-08 | 24 |
endothelial cell | 1.25e-08 | 36 |
mesodermal cell | 3.84e-08 | 121 |
motile cell | 7.83e-08 | 386 |
endothelial cell of artery | 3.65e-07 | 9 |
myeloid cell | 4.23e-07 | 108 |
common myeloid progenitor | 4.23e-07 | 108 |
meso-epithelial cell | 9.85e-07 | 45 |