FFCP PHASE1:Hg19::chr17:73553913..73553927,+: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=3993 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=6629 | |||
|TSSclassifier=strong | |||
|UniProt=G3V1I9 | |||
|association_with_transcript=18bp_to_ENST00000545227_5end | |||
|coexpression_cluster_id=C76 | |||
|description=CAGE_peak_2_at_LLGL2_5end | |||
|id=chr17:73553913..73553927,+ | |||
|ontology_enrichment_celltype=CL:0000181!6.86e-15!12;CL:0000417!6.86e-15!12;CL:0000668!6.86e-15!12;CL:0000414!6.86e-15!12;CL:0000412!6.86e-15!12;CL:0000182!6.86e-15!12;CL:0000066!6.61e-07!254 | |||
|ontology_enrichment_celltype_v019=CL:0000182;2.21e-28;12!CL:0000313;6.13e-11;1 | |||
|ontology_enrichment_celltype_v019_2=CL:0000182,2.55e-28,12;CL:0000313,9.05e-11,1;CL:0000223,2.18e-07,58 | |||
|ontology_enrichment_development_v019=UBERON:0004161;3.64e-14;11!UBERON:0009497;5.08e-12;13!UBERON:0001041;8.24e-08;30 | |||
|ontology_enrichment_disease=DOID:305!4.64e-11!106;DOID:0050687!1.25e-08!143 | |||
|ontology_enrichment_disease_v019=DOID:2152;6.13e-11;1 | |||
|ontology_enrichment_disease_v019_2=DOID:2152,9.05e-11,1 | |||
|ontology_enrichment_uberon=UBERON:0001737!2.21e-18!9;UBERON:0004921!2.09e-17!129;UBERON:0004185!2.09e-17!129;UBERON:0009497!5.84e-16!25;UBERON:0000015!5.84e-16!25;UBERON:0002423!5.84e-16!25;UBERON:0006235!5.84e-16!25;UBERON:0004161!5.84e-16!25;UBERON:0001041!2.40e-15!98;UBERON:0008835!2.80e-15!22;UBERON:0003894!2.80e-15!22;UBERON:0005172!2.83e-15!55;UBERON:0005173!2.83e-15!55;UBERON:0002107!1.04e-14!19;UBERON:0006925!1.04e-14!19;UBERON:0008836!1.04e-14!19;UBERON:0009854!1.60e-14!23;UBERON:0001007!1.87e-14!155;UBERON:0001555!1.87e-14!155;UBERON:0007026!1.87e-14!155;UBERON:0000077!1.84e-13!130;UBERON:0002417!2.31e-13!61;UBERON:0000916!2.31e-13!61;UBERON:0007499!3.42e-13!25;UBERON:0004119!1.20e-12!169;UBERON:0000925!1.20e-12!169;UBERON:0006595!1.20e-12!169;UBERON:0009856!1.32e-12!26;UBERON:0005177!2.78e-12!107;UBERON:0000466!8.60e-12!126;UBERON:0009569!3.02e-11!113;UBERON:0001048!7.80e-11!168;UBERON:0008947!1.00e-10!38;UBERON:0003258!1.00e-10!38;UBERON:0005057!2.86e-10!26;UBERON:0002365!3.26e-10!31;UBERON:0002330!3.26e-10!31;UBERON:0003929!4.51e-10!54;UBERON:0005911!5.80e-10!82;UBERON:0003104!2.97e-09!238;UBERON:0009142!2.97e-09!238;UBERON:0000481!2.17e-08!347;UBERON:0001557!3.46e-08!19;UBERON:0002368!3.44e-07!35;UBERON:0000065!5.34e-07!53 | |||
|ontology_enrichment_uberon_v019=UBERON:0002107;4.90e-24;19!UBERON:0006925;4.90e-24;19!UBERON:0002423;4.09e-18;25!UBERON:0002365;3.27e-14;31!UBERON:0002330;3.27e-14;31!UBERON:0002368;5.07e-12;33!UBERON:0000949;8.15e-12;43!UBERON:0004911;6.13e-11;1!UBERON:0001301;1.33e-10;1!UBERON:0005172;8.91e-08;52!UBERON:0005173;8.91e-08;52 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002107,4.73e-24,19;UBERON:0006925,4.73e-24,19;UBERON:0008836,4.73e-24,19;UBERON:0008835,1.10e-20,22;UBERON:0003894,1.10e-20,22;UBERON:0009854,9.29e-20,23;UBERON:0007499,3.99e-18,25;UBERON:0009497,3.99e-18,25;UBERON:0000015,3.99e-18,25;UBERON:0002423,3.99e-18,25;UBERON:0006235,3.99e-18,25;UBERON:0004161,3.99e-18,25;UBERON:0009856,2.11e-17,26;UBERON:0002365,1.74e-14,31;UBERON:0002330,1.74e-14,31;UBERON:0005172,4.66e-13,54;UBERON:0005173,4.66e-13,54;UBERON:0002368,9.43e-13,35;UBERON:0000949,1.10e-12,45;UBERON:0002417,1.25e-11,60;UBERON:0000916,1.25e-11,60;UBERON:0004911,9.05e-11,1;UBERON:0001301,1.46e-10,1;UBERON:0005177,1.08e-09,101;UBERON:0003929,5.21e-08,54;UBERON:0001041,1.15e-07,87;UBERON:0002530,2.87e-07,59;UBERON:0009569,5.22e-07,112 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.261958150995425,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.236613600079688,0.337169380156203,0,0.55146986366197,0.871517776369625,0.71181185733329,0.943819157121151,0.196221465125346,0,0,0,0.4115740113314,0,6.33775174109154,1.96565443335525,4.13552934676983,0,0.368965315629341,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.15403067420883,1.56869953835371,0,0,0,0,0,0,0.812839312631559,0.501689773854853,0,0,0,0,0,0,0,0,1.44257416306811,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.941438007767792,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,18.3910905933622,0,0,0,0,0.358042349351218,0,0,0,0,0,0,0,0,0.262379999988587,0,0,0,0,0.344743373241465,0,0,0,0,0,0.221158519862449,0,0,0,0,0.0769502585037971,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.14262965711403,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.41981432097328,0,0,0,0,0,0,0,0,0,0,0,0,0,1.39781334593624,0,0,0,0,0,0,0,0,0,0,0,0,0.640358984218058,0,2.3054466744657,0,3.08870996151536,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.20592910460226,2.22522817629149,2.02210631562555,0.688992370603241,0,0,0,0,0,0,0,0,0,0,0.315222829196793,0.83927341015997,0,0,0,0,0,0,0,0,0,0,0,0,0,2.4913879725274,0,0,0,0.684347351537318,0,0.213574825135389,1.41483874589699,0.414239055347196,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0620964029413835,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.02496607435179,0.345430341731199,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.601682626794058,0,2.34454203369928,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.118193840883968,0.111231401892069,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.01339777236026,0,2.43835849964539,0,0,0,0,0,0,0,0,0,0,0.0771741581079447,0.218559560503957,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0679914901909147,0,3.7031878836078,0,0,0,0,0,0,0,0,0,0,0.151557396436479,0,0,0,0,0,0,0,0,0,0,0,0,0,0.143444410785353,0,0,0,0,0,0,0,0,0,0,0 | |||
|short_description=p2@LLGL2 | |||
}} |
Revision as of 17:19, 20 January 2014
Short description: | p2@LLGL2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_2_at_LLGL2_5end |
Coexpression cluster: | C76_argyrophil_gastrointestinal_temporal_duodenum_neuroblastoma_merkel_smallcell |
Association with transcript: | 18bp_to_ENST00000545227_5end |
EntrezGene: | LLGL2 |
HGNC: | 6629 |
UniProt: | G3V1I9 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
hepatocyte | 2.55e-28 | 12 |
serous secreting cell | 9.05e-11 | 1 |
endodermal cell | 2.18e-07 | 58 |
Ontology term | p-value | n |
---|---|---|
liver | 4.73e-24 | 19 |
digestive gland | 4.73e-24 | 19 |
liver bud | 4.73e-24 | 19 |
hepatic diverticulum | 1.10e-20 | 22 |
liver primordium | 1.10e-20 | 22 |
digestive tract diverticulum | 9.29e-20 | 23 |
epithelial sac | 3.99e-18 | 25 |
epithelium of foregut-midgut junction | 3.99e-18 | 25 |
anatomical boundary | 3.99e-18 | 25 |
hepatobiliary system | 3.99e-18 | 25 |
foregut-midgut junction | 3.99e-18 | 25 |
septum transversum | 3.99e-18 | 25 |
sac | 2.11e-17 | 26 |
exocrine gland | 1.74e-14 | 31 |
exocrine system | 1.74e-14 | 31 |
abdomen element | 4.66e-13 | 54 |
abdominal segment element | 4.66e-13 | 54 |
endocrine gland | 9.43e-13 | 35 |
endocrine system | 1.10e-12 | 45 |
abdominal segment of trunk | 1.25e-11 | 60 |
abdomen | 1.25e-11 | 60 |
epithelium of female gonad | 9.05e-11 | 1 |
epididymis | 1.46e-10 | 1 |
trunk region element | 1.08e-09 | 101 |
gut epithelium | 5.21e-08 | 54 |
foregut | 1.15e-07 | 87 |
gland | 2.87e-07 | 59 |
subdivision of trunk | 5.22e-07 | 112 |
Ontology term | p-value | n |
---|---|---|
ovary epithelial cancer | 9.05e-11 | 1 |