FFCP PHASE1:Hg19::chr17:7210877..7210888,+: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=1984 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=3300 | |||
|TSSclassifier=strong | |||
|UniProt=P63241 | |||
|association_with_transcript=21bp_to_NM_001970,uc010vtv.1_5end | |||
|coexpression_cluster_id=C447 | |||
|description=CAGE_peak_4_at_EIF5A_5end | |||
|id=chr17:7210877..7210888,+ | |||
|ontology_enrichment_celltype=CL:0000548!7.71e-46!679;CL:0000004!7.71e-46!679;CL:0000255!7.71e-46!679;CL:0000012!1.67e-45!682;CL:0000144!1.18e-33!625;CL:0000003!1.78e-29!722;CL:0002371!5.82e-29!591;CL:0002321!3.30e-28!248;CL:0000220!6.11e-28!246;CL:0000222!4.75e-24!119;CL:0000066!4.52e-21!254;CL:0000055!2.78e-20!180;CL:0000063!6.62e-19!578;CL:0000183!3.85e-15!59;CL:0000680!4.96e-15!57;CL:0000056!4.96e-15!57;CL:0000355!4.96e-15!57;CL:0000187!2.87e-14!54;CL:0000393!1.75e-13!60;CL:0000211!1.75e-13!60;CL:0000192!2.07e-12!42;CL:0000514!2.07e-12!42;CL:0000076!9.72e-12!62;CL:0000359!3.65e-10!32;CL:0000213!2.59e-09!57;CL:0000215!2.59e-09!57;CL:1000449!5.43e-08!16;CL:0000115!1.02e-07!35;CL:0002078!1.39e-07!44;CL:0000057!1.65e-07!75;CL:0000071!4.64e-07!18;CL:0002546!4.64e-07!18;CL:1000497!5.60e-07!18;CL:0002518!5.60e-07!18;CL:0002139!5.97e-07!24 | |||
|ontology_enrichment_celltype_v019=CL:0000359;1.23e-09;32!CL:0000192;3.80e-09;43!CL:0000187;1.17e-08;55!CL:1000449;2.03e-08;15!CL:1000497;2.39e-07;17!CL:0002518;2.39e-07;17!CL:0002681;4.33e-07;12!CL:0002584;4.33e-07;12!CL:0000071;4.78e-07;18!CL:0000115;4.96e-07;36!CL:0000393;5.00e-07;61!CL:0000211;5.00e-07;61!CL:0002139;5.47e-07;24 | |||
|ontology_enrichment_celltype_v019_2=CL:0002321,1.42e-28,250;CL:0000222,2.48e-24,121;CL:0000066,3.98e-21,253;CL:0000680,7.69e-15,58;CL:0000056,7.69e-15,58;CL:0000355,7.69e-15,58;CL:0000187,4.45e-14,55;CL:0000393,2.52e-13,61;CL:0000211,2.52e-13,61;CL:0000192,3.38e-12,43;CL:0000514,3.38e-12,43;CL:0000076,5.02e-12,63;CL:0000359,3.64e-10,32;CL:0000213,1.15e-09,58;CL:0000215,1.15e-09,58;CL:1000449,2.22e-08,15;CL:0000115,4.38e-08,36;CL:0002078,6.22e-08,45;CL:1000497,2.91e-07,17;CL:0002518,2.91e-07,17;CL:0000057,4.18e-07,76;CL:0002681,4.53e-07,12;CL:0002584,4.53e-07,12;CL:0000071,4.63e-07,18;CL:0002546,4.63e-07,18;CL:0002139,5.95e-07,24 | |||
|ontology_enrichment_development_v019=CL:0000514;3.80e-09;43!CL:0000355;2.14e-08;58!CL:0000222;1.74e-07;121!CL:0002546;4.78e-07;18 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000486!1.67e-16!82;UBERON:0000914!3.12e-15!83;UBERON:0002329!3.12e-15!83;UBERON:0003077!3.12e-15!83;UBERON:0003059!3.12e-15!83;UBERON:0007282!3.12e-15!83;UBERON:0009618!3.12e-15!83;UBERON:0007285!3.12e-15!83;UBERON:0005256!3.33e-15!143;UBERON:0004290!4.93e-15!70;UBERON:0002049!2.11e-14!79;UBERON:0007798!2.11e-14!79;UBERON:0003104!2.24e-14!238;UBERON:0009142!2.24e-14!238;UBERON:0003914!1.76e-13!118;UBERON:0000055!1.80e-13!69;UBERON:0002100!5.22e-13!216;UBERON:0001981!2.74e-12!60;UBERON:0007500!2.74e-12!60;UBERON:0004537!2.74e-12!60;UBERON:0006965!2.74e-12!60;UBERON:0001637!2.79e-12!42;UBERON:0003509!2.79e-12!42;UBERON:0004572!2.79e-12!42;UBERON:0000490!5.73e-12!138;UBERON:0001134!6.94e-12!61;UBERON:0002036!6.94e-12!61;UBERON:0003082!6.94e-12!61;UBERON:0004872!5.75e-11!84;UBERON:0002385!1.17e-10!63;UBERON:0001015!1.17e-10!63;UBERON:0000383!1.17e-10!63;UBERON:0004573!6.81e-09!33;UBERON:0004571!6.81e-09!33;UBERON:0004535!3.75e-08!110;UBERON:0004211!5.43e-08!16;UBERON:0001285!5.43e-08!16;UBERON:0007684!5.43e-08!16;UBERON:0003220!5.43e-08!16;UBERON:0004208!5.43e-08!16;UBERON:0000487!2.19e-07!22;UBERON:0001009!2.63e-07!113;UBERON:0001986!4.64e-07!18;UBERON:0004638!4.64e-07!18;UBERON:0004852!4.64e-07!18;UBERON:0006555!4.75e-07!17;UBERON:0005103!4.75e-07!17;UBERON:0000083!4.75e-07!17;UBERON:0009201!4.75e-07!17;UBERON:0004819!4.75e-07!17;UBERON:0006553!4.75e-07!17;UBERON:0003074!4.75e-07!17;UBERON:0003060!4.75e-07!17;UBERON:0001737!6.04e-07!9;UBERON:0000119!6.52e-07!312 | |||
|ontology_enrichment_uberon_v019=UBERON:0003914;9.93e-10;74!UBERON:0007500;4.43e-09;56!UBERON:0001981;4.43e-09;56!UBERON:0004537;4.43e-09;56!UBERON:0001637;7.27e-09;42!UBERON:0003509;7.27e-09;42!UBERON:0004572;7.27e-09;42!UBERON:0006555;2.03e-08;15!UBERON:0004819;2.03e-08;15!UBERON:0001285;2.03e-08;15!UBERON:0007684;2.03e-08;15!UBERON:0004573;4.80e-08;33!UBERON:0004571;4.80e-08;33!UBERON:0000055;6.56e-08;65!UBERON:0000487;2.12e-07;22!UBERON:0002049;2.63e-07;75!UBERON:0007798;2.63e-07;75!UBERON:0001225;4.33e-07;12!UBERON:0008987;4.33e-07;12!UBERON:0006554;4.70e-07;30!UBERON:0001008;4.70e-07;30!UBERON:0004638;4.78e-07;18!UBERON:0001986;4.78e-07;18!UBERON:0004852;4.78e-07;18!UBERON:0001737;5.97e-07;9!UBERON:0001557;5.97e-07;9!UBERON:0000353;8.42e-07;15!UBERON:0000025;9.61e-07;93 | |||
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| |||
|short_description=p4@EIF5A | |||
}} |
Revision as of 13:29, 20 January 2014
Short description: | p4@EIF5A |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_4_at_EIF5A_5end |
Coexpression cluster: | C447_Alveolar_Bronchial_Smooth_Renal_Tracheal_Keratocytes_Hepatic |
Association with transcript: | 21bp_to_NM_001970, uc010vtv.1_5end |
EntrezGene: | EIF5A |
HGNC: | 3300 |
UniProt: | P63241 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
embryonic cell | 1.42e-28 | 250 |
mesodermal cell | 2.48e-24 | 121 |
epithelial cell | 3.98e-21 | 253 |
muscle precursor cell | 7.69e-15 | 58 |
myoblast | 7.69e-15 | 58 |
multi-potent skeletal muscle stem cell | 7.69e-15 | 58 |
muscle cell | 4.45e-14 | 55 |
electrically responsive cell | 2.52e-13 | 61 |
electrically active cell | 2.52e-13 | 61 |
smooth muscle cell | 3.38e-12 | 43 |
smooth muscle myoblast | 3.38e-12 | 43 |
squamous epithelial cell | 5.02e-12 | 63 |
vascular associated smooth muscle cell | 3.64e-10 | 32 |
lining cell | 1.15e-09 | 58 |
barrier cell | 1.15e-09 | 58 |
epithelial cell of nephron | 2.22e-08 | 15 |
endothelial cell | 4.38e-08 | 36 |
meso-epithelial cell | 6.22e-08 | 45 |
kidney cell | 2.91e-07 | 17 |
kidney epithelial cell | 2.91e-07 | 17 |
fibroblast | 4.18e-07 | 76 |
kidney cortical cell | 4.53e-07 | 12 |
renal cortical epithelial cell | 4.53e-07 | 12 |
blood vessel endothelial cell | 4.63e-07 | 18 |
embryonic blood vessel endothelial progenitor cell | 4.63e-07 | 18 |
endothelial cell of vascular tree | 5.95e-07 | 24 |