FFCP PHASE1:Hg19::chr17:50236933..50236967,-: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
Line 1: | Line 1: | ||
{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=56934 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=1369 | |||
|TSSclassifier=weak | |||
|UniProt=Q9NS85 | |||
|association_with_transcript=193bp_to_ENST00000285273,NM_001082533,uc002itx.3_5end | |||
|coexpression_cluster_id=C3 | |||
|description=CAGE_peak_3_at_CA10_5end | |||
|id=chr17:50236933..50236967,- | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019=UBERON:0006601;8.42e-19;82!UBERON:0006215;3.82e-15;3!UBERON:0006241;5.31e-07;3!UBERON:0003057;5.31e-07;3 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001049!3.24e-100!57;UBERON:0005068!3.24e-100!57;UBERON:0006241!3.24e-100!57;UBERON:0007135!3.24e-100!57;UBERON:0000955!2.36e-83!69;UBERON:0006238!2.36e-83!69;UBERON:0002616!2.45e-83!59;UBERON:0001017!3.35e-82!82;UBERON:0005743!2.63e-81!86;UBERON:0000073!1.01e-78!94;UBERON:0001016!1.01e-78!94;UBERON:0002780!5.63e-75!41;UBERON:0001890!5.63e-75!41;UBERON:0006240!5.63e-75!41;UBERON:0003080!5.23e-73!42;UBERON:0003075!5.54e-69!86;UBERON:0007284!5.54e-69!86;UBERON:0002346!2.11e-65!90;UBERON:0001893!3.64e-61!34;UBERON:0002020!3.91e-61!34;UBERON:0003528!3.91e-61!34;UBERON:0002791!2.30e-58!33;UBERON:0001869!2.67e-56!32;UBERON:0002619!9.67e-55!22;UBERON:0007023!1.45e-53!115;UBERON:0003056!7.78e-51!61;UBERON:0001950!1.67e-49!20;UBERON:0000956!1.01e-47!25;UBERON:0000203!1.01e-47!25;UBERON:0000033!2.12e-46!123;UBERON:0000153!1.06e-45!129;UBERON:0007811!1.06e-45!129;UBERON:0004121!2.37e-40!169;UBERON:0000924!3.95e-39!173;UBERON:0006601!3.95e-39!173;UBERON:0003076!9.56e-27!15;UBERON:0003057!9.56e-27!15;UBERON:0000025!4.32e-25!194;UBERON:0004732!1.34e-21!13;UBERON:0004733!3.93e-19!12;UBERON:0002028!3.93e-19!12;UBERON:0007277!3.93e-19!12;UBERON:0000200!2.07e-18!6;UBERON:0004111!7.72e-18!241;UBERON:0002298!5.08e-17!8;UBERON:0001872!4.98e-16!5;UBERON:0000349!1.99e-15!5;UBERON:0000064!3.16e-15!219;UBERON:0002021!4.57e-15!5;UBERON:0002420!4.64e-15!9;UBERON:0007245!4.64e-15!9;UBERON:0010009!4.64e-15!9;UBERON:0010011!4.64e-15!9;UBERON:0000454!4.64e-15!9;UBERON:0000477!7.66e-15!286;UBERON:0001894!8.48e-15!7;UBERON:0006222!8.48e-15!7;UBERON:0002308!1.30e-14!9;UBERON:0000125!1.30e-14!9;UBERON:0000475!4.44e-14!365;UBERON:0001871!7.14e-14!7;UBERON:0000483!1.07e-13!309;UBERON:0000119!1.90e-13!312;UBERON:0002680!3.31e-12!9;UBERON:0001895!3.31e-12!9;UBERON:0010092!3.31e-12!9;UBERON:0002771!4.75e-10!3;UBERON:0009663!8.06e-10!7;UBERON:0000988!9.20e-10!3;UBERON:0002240!1.01e-09!3;UBERON:0006331!2.50e-09!3;UBERON:0001896!3.74e-09!3;UBERON:0005290!3.74e-09!3;UBERON:0010096!3.74e-09!3;UBERON:0000062!4.68e-09!511;UBERON:0000481!5.29e-08!347;UBERON:0001905!9.17e-08!2;UBERON:0002757!9.17e-08!2;UBERON:0010134!9.17e-08!2;UBERON:0002784!9.17e-08!2;UBERON:0005408!9.17e-08!2;UBERON:0001899!9.17e-08!2;UBERON:0003296!1.27e-07!4;UBERON:0010133!1.27e-07!4;UBERON:0001876!1.57e-07!2;UBERON:0001870!2.35e-07!2;UBERON:0002148!6.57e-07!2;UBERON:0009662!6.57e-07!2;UBERON:0000369!7.63e-07!4;UBERON:0002435!7.63e-07!4;UBERON:0000204!7.63e-07!4;UBERON:0010082!7.63e-07!4;UBERON:0001954!8.08e-07!2;UBERON:0003022!8.08e-07!2;UBERON:0002421!8.08e-07!2;UBERON:0002600!8.08e-07!2 | |||
|ontology_enrichment_uberon_v019=UBERON:0002619;1.31e-74;22!UBERON:0001950;3.38e-74;20!UBERON:0000956;1.91e-65;25!UBERON:0000203;1.91e-65;25!UBERON:0001869;2.54e-54;32!UBERON:0003528;5.11e-54;34!UBERON:0002020;5.11e-54;34!UBERON:0001893;2.05e-49;34!UBERON:0002791;1.02e-48;32!UBERON:0000073;6.40e-46;53!UBERON:0002616;6.40e-46;53!UBERON:0002780;2.52e-41;41!UBERON:0001890;2.52e-41;41!UBERON:0000955;2.43e-29;68!UBERON:0001016;3.50e-27;83!UBERON:0001017;7.96e-27;75!UBERON:0000200;9.46e-27;6!UBERON:0004732;1.53e-26;13!UBERON:0001872;3.38e-23;5!UBERON:0004733;5.58e-23;12!UBERON:0002028;5.58e-23;12!UBERON:0002021;4.95e-22;5!UBERON:0002298;4.40e-18;6!UBERON:0002680;5.90e-18;9!UBERON:0001895;5.90e-18;9!UBERON:0001871;2.27e-16;6!UBERON:0000349;1.17e-14;5!UBERON:0001870;1.53e-14;3!UBERON:0000988;7.28e-14;3!UBERON:0007023;1.40e-13;114!UBERON:0002784;3.17e-11;4!UBERON:0001905;6.99e-11;2!UBERON:0002757;6.99e-11;2!UBERON:0010134;6.99e-11;2!UBERON:0005408;6.99e-11;2!UBERON:0001899;6.99e-11;2!UBERON:0001876;2.06e-10;2!UBERON:0002702;4.22e-10;2!UBERON:0011216;6.33e-10;132!UBERON:0002771;6.49e-10;2!UBERON:0002148;1.30e-09;2!UBERON:0006331;1.30e-09;2!UBERON:0009662;1.30e-09;2!UBERON:0010314;3.88e-08;132!UBERON:0002037;8.83e-08;6!UBERON:0002240;5.31e-07;3!UBERON:0005174;5.31e-07;3!UBERON:0001137;5.31e-07;3 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001049,7.79e-91,56;UBERON:0005068,7.79e-91,56;UBERON:0006241,7.79e-91,56;UBERON:0007135,7.79e-91,56;UBERON:0000073,5.81e-85,53;UBERON:0002616,5.81e-85,53;UBERON:0002619,9.95e-75,22;UBERON:0001950,3.45e-74,20;UBERON:0000955,1.42e-72,68;UBERON:0006238,1.42e-72,68;UBERON:0001017,1.09e-71,81;UBERON:0001016,1.53e-67,89;UBERON:0003075,1.65e-67,82;UBERON:0007284,1.65e-67,82;UBERON:0000956,1.50e-65,25;UBERON:0000203,1.50e-65,25;UBERON:0002346,4.78e-64,86;UBERON:0003528,3.60e-63,34;UBERON:0002020,3.60e-63,34;UBERON:0002780,2.06e-62,41;UBERON:0001890,2.06e-62,41;UBERON:0003080,2.06e-62,41;UBERON:0006240,2.06e-62,41;UBERON:0001869,8.69e-62,32;UBERON:0001893,5.93e-58,34;UBERON:0002791,5.19e-56,32;UBERON:0010371,9.79e-55,104;UBERON:0003056,2.09e-47,61;UBERON:0007023,6.94e-44,114;UBERON:0010314,1.30e-41,132;UBERON:0004121,7.62e-36,171;UBERON:0000924,7.62e-36,171;UBERON:0006601,7.62e-36,171;UBERON:0003076,2.44e-28,15;UBERON:0003057,2.44e-28,15;UBERON:0000200,7.43e-27,6;UBERON:0004732,1.96e-26,13;UBERON:0011216,4.63e-24,223;UBERON:0001872,2.83e-23,5;UBERON:0004733,7.00e-23,12;UBERON:0002028,7.00e-23,12;UBERON:0007277,7.00e-23,12;UBERON:0002021,7.94e-22,5;UBERON:0000025,1.93e-21,192;UBERON:0002680,5.18e-18,9;UBERON:0001895,5.18e-18,9;UBERON:0010092,5.18e-18,9;UBERON:0002298,6.84e-18,6;UBERON:0001871,2.17e-16,6;UBERON:0004111,1.22e-15,240;UBERON:0000349,5.04e-15,5;UBERON:0001870,1.25e-14,3;UBERON:0000988,7.31e-14,3;UBERON:0000483,1.95e-13,306;UBERON:0000119,3.15e-13,309;UBERON:0002784,2.68e-11,4;UBERON:0001905,7.18e-11,2;UBERON:0002757,7.18e-11,2;UBERON:0010134,7.18e-11,2;UBERON:0005408,7.18e-11,2;UBERON:0001899,7.18e-11,2;UBERON:0001876,1.60e-10,2;UBERON:0002702,3.36e-10,2;UBERON:0002771,6.36e-10,2;UBERON:0002148,1.36e-09,2;UBERON:0006331,1.36e-09,2;UBERON:0009662,1.36e-09,2;UBERON:0002037,7.98e-08,6;UBERON:0006215,7.98e-08,6;UBERON:0002240,4.30e-07,3;UBERON:0005174,4.30e-07,3;UBERON:0001137,4.30e-07,3 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.14828656316206,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.458426764241994,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.97659059106519,2.81338832821025,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.969332746095218,1.57705766875147,3.99227596002388,0,0,0,0,0,0,1.03423011972439,0,0.173624994933292,0,0.361789315876224,4.5774520895125,6.3030178160798,2.95547618953547,1.31631238292384,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0884575645033392,0,0,0,0,0.741412462787447,0,0.468528891450678,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.03382666702479,0,0,3.60871536948509,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.958337652243951,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.795229689809303,1.77064427945048,0,0,0,0,0,3.64497339948148,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.16354660725395,1.71902382265497,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.77213635993397,2.3184990331373,3.3801551290755,0.573409195690071,1.33114861844223,1.1177352529449,0.553394539744923,0,0,0,0,0,1.01444720027578,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.52084279766904,0,0,0,0,0,0,0,0,0,0,0,0,1.24415452006595,0,0,0,0.218419276384028,0,0,0,0,0,0,0.80057074828547,0,0,1.99110597799025,1.41696576325585,1.27707087245721,2.46139637088906,2.52071696221718,1.38314504928436,1.45328081068666,1.42769420259154,0,0,0,0,0,0,0,0,0,0,0,0,0,2.83657855397258,3.90539049306924,3.51367554052013,3.6781169912466,1.64092442705466,0,0,0,0,5.35701835878287,4.37168838884471,0,0.455324382702595,0,0,0,2.58284985311961,2.23627430113687,0,0,0,0.314231179832004,0,0.913158720509496,0,0,1.42953088353313,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.109940516745429,0.603851374266694,0,0,0,0,0,1.96308467114945,0.594092800654172,3.3812458206672,0,0,0.0644578879735772,0,0,0,0,0,0,0.716697915757256,0,3.26359152916391,0.436350690340377,0,0,0,0,0,0,0,0,0,0,0,0,0,1.65833887891756,0.517164979309476,0,0.23806443146374,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | |||
|short_description=p3@CA10 | |||
}} |
Revision as of 16:21, 20 January 2014
Short description: | p3@CA10 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | No |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_3_at_CA10_5end |
Coexpression cluster: | C3_occipital_temporal_insula_medial_postcentral_frontal_amygdala |
Association with transcript: | 193bp_to_ENST00000285273, NM_001082533, uc002itx.3_5end |
EntrezGene: | CA10 |
HGNC: | 1369 |
UniProt: | Q9NS85 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data