FFCP PHASE1:Hg19::chr17:47723943..47723952,-: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
Line 1: | Line 1: | ||
{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=8405 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=11254 | |||
|TSSclassifier=strong | |||
|UniProt=D6RD94 | |||
|association_with_transcript=31bp_to_ENST00000510476_5end | |||
|coexpression_cluster_id=C48 | |||
|description=CAGE_peak_5_at_SPOP_5end | |||
|id=chr17:47723943..47723952,- | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019=UBERON:0000358;8.02e-16;1!UBERON:0009143;1.34e-15;1!UBERON:0005754;1.34e-15;1!UBERON:0006965;1.61e-08;2!UBERON:0007297;1.86e-08;2 | |||
|ontology_enrichment_disease=DOID:3350!1.09e-07!2 | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0006947!8.25e-11!3;UBERON:0004054!8.25e-11!3;UBERON:0007023!3.22e-10!115;UBERON:0005904!3.36e-08!4;UBERON:0000059!9.10e-08!11;UBERON:0003135!2.39e-07!11;UBERON:0003127!4.49e-07!2;UBERON:0001007!9.95e-07!155;UBERON:0001555!9.95e-07!155;UBERON:0007026!9.95e-07!155 | |||
|ontology_enrichment_uberon_v019=UBERON:0006947;9.09e-20;3!UBERON:0004054;9.09e-20;3!UBERON:0000998;1.34e-15;1!UBERON:0006868;1.34e-15;1!UBERON:0005409;1.71e-15;22!UBERON:0001000;2.56e-15;1!UBERON:0007195;2.56e-15;1!UBERON:0005352;2.56e-15;1!UBERON:0005904;4.39e-15;4!UBERON:0001155;7.52e-15;9!UBERON:0004921;1.87e-14;33!UBERON:0000160;6.85e-13;17!UBERON:0000059;2.90e-12;11!UBERON:0001255;2.57e-08;2!UBERON:0001556;2.57e-08;2 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0006947,1.15e-19,3;UBERON:0004054,1.15e-19,3;UBERON:0000998,1.54e-15,1;UBERON:0006868,1.54e-15,1;UBERON:0001000,3.17e-15,1;UBERON:0005352,3.17e-15,1;UBERON:0007195,3.66e-15,1;UBERON:0005904,5.24e-15,4;UBERON:0001155,6.23e-15,9;UBERON:0005409,9.19e-14,25;UBERON:0000160,5.96e-13,17;UBERON:0000059,2.49e-12,11;UBERON:0007023,3.47e-09,114;UBERON:0001255,2.67e-08,2;UBERON:0001556,2.67e-08,2 | |||
|phase1_expression=0,0,0.140954404095971,0,0,0,0,0,0,0.245733936501509,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.144846518960824,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.12663051166458,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.110293972732394,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.16798212819886,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.356857977594324,0,0,0,0,0,0,0.368738337083406,0,0,0,0,0,0,0,0,0,0,0,0.280660094433074,0,0,0.321707842287215,0,0,0,0,0,0,0.120859449591622,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0915694648183434,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.213648142254946,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.47748896947538,0.296964680832639,0.307160702099232,0,0,0,0,0,3.98495976502139,0.828851746593443,0,0,0,0,0,0,0,1.28236427328014,0,1.11136990144637,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.139423744278603,1.69290568708354,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.99052386215701,2.56526937059684,4.888241159469,0,0,0,0,0,0,0,0,0,1.18375320854817,0,0,0.063186579628488,0.150323419414493,0,0,0,0,0,0,0,0,0.0979923974143777,0.0870592065804026,0.17472666824203,0.859930162358083,0,0,0,2.13375836274523,0,0,0.137041924646751,0,0,0.195551382734803,0,0.640358984218058,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.360299883542404,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0788057072991982,0.0524545881349981,0.105600336519406,0,0,0,0,0.25426853765475,0,0,0,0,0,0,0.113312091520126,0,0,0,0,0,0,0.106787412567695,0,0.414239055347196,0,0,0,0,0.544017803369474,0,0,0,0,0,0,0,0,0,0.0620964029413835,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.752103283492572,0,0,0,0,0,0,0,0,0,0,0,0.496211178389294,0,0,0,0,0,0,0,0,0,0,0,0,0,0.941917114206168,0,0,0.913158720509496,0,0,0,0,0,0,0,0,0,0,0,0,0,2.11693525095465,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.926089897295336,1.5299169235277,0,8.58019126138669,0,0,0,0.4226557275834,0,0,0,0,0,0,0,10.2247094354512,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.267964130156178,0,0,0,0,0,0.124149428591716,0,0.0636471582781649,0.202117188958219,0,0,0,0.0717222053926763,0.332660356546013,0,0,0,0,4.69281884806909,0,0.813792356631477,0,0,0 | |||
|short_description=p5@SPOP | |||
}} |
Revision as of 16:07, 20 January 2014
Short description: | p5@SPOP |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_5_at_SPOP_5end |
Coexpression cluster: | C48_smooth_bladder_esophagus_colon_penis_aorta_uterus |
Association with transcript: | 31bp_to_ENST00000510476_5end |
EntrezGene: | SPOP |
HGNC: | 11254 |
UniProt: | D6RD94 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
male genital duct | 1.15e-19 | 3 |
internal male genitalia | 1.15e-19 | 3 |
seminal vesicle | 1.54e-15 | 1 |
seminal fluid secreting gland | 1.54e-15 | 1 |
vas deferens | 3.17e-15 | 1 |
spermatic cord | 3.17e-15 | 1 |
stroma of bone marrow | 3.66e-15 | 1 |
duct of male reproductive system | 5.24e-15 | 4 |
colon | 6.23e-15 | 9 |
gastrointestinal system | 9.19e-14 | 25 |
intestine | 5.96e-13 | 17 |
large intestine | 2.49e-12 | 11 |
adult organism | 3.47e-09 | 114 |
urinary bladder | 2.67e-08 | 2 |
lower urinary tract | 2.67e-08 | 2 |