FFCP PHASE1:Hg19::chr16:86612456..86612478,+: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene= | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC= | |||
|TSSclassifier=weak | |||
|UniProt= | |||
|association_with_transcript=129bp_to_AB464533_5end | |||
|description=CAGE_peak_1_at_AB464533_5end | |||
|id=chr16:86612456..86612478,+ | |||
|ontology_enrichment_celltype=CL:0000055!4.14e-18!180;CL:0000057!2.39e-15!75;CL:0002620!1.54e-14!23;CL:0000183!2.49e-14!59;CL:0000680!2.29e-12!57;CL:0000056!2.29e-12!57;CL:0000355!2.29e-12!57;CL:0000187!9.40e-12!54;CL:0000393!4.61e-11!60;CL:0000211!4.61e-11!60;CL:0000188!1.45e-09!9;CL:0002334!8.69e-07!12 | |||
|ontology_enrichment_celltype_v019=CL:0000188;1.26e-20;9!CL:0002570;1.59e-10;8!CL:0002620;1.00e-09;23!CL:0002582;4.98e-09;3!CL:0002564;1.45e-08;3!CL:0000680;1.56e-08;7!CL:0000594;5.43e-08;3 | |||
|ontology_enrichment_celltype_v019_2=CL:0000188,1.67e-20,9;CL:0002570,1.54e-10,8;CL:0002620,1.57e-09,23;CL:0002582,4.97e-09,3;CL:0000680,1.28e-08,58;CL:0000056,1.28e-08,58;CL:0000355,1.28e-08,58;CL:0002564,1.61e-08,3;CL:0000187,4.45e-08,55;CL:0000594,5.67e-08,3;CL:0000057,3.82e-07,76;CL:0000393,6.77e-07,61;CL:0000211,6.77e-07,61 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000486!1.22e-15!82;UBERON:0000914!2.12e-14!83;UBERON:0002329!2.12e-14!83;UBERON:0003077!2.12e-14!83;UBERON:0003059!2.12e-14!83;UBERON:0007282!2.12e-14!83;UBERON:0009618!2.12e-14!83;UBERON:0007285!2.12e-14!83;UBERON:0004290!2.75e-13!70;UBERON:0000475!3.52e-13!365;UBERON:0001134!1.84e-11!61;UBERON:0002036!1.84e-11!61;UBERON:0003082!1.84e-11!61;UBERON:0002385!2.20e-11!63;UBERON:0001015!2.20e-11!63;UBERON:0000383!2.20e-11!63;UBERON:0005256!3.55e-11!143;UBERON:0002100!1.14e-10!216;UBERON:0000119!1.58e-08!312;UBERON:0002199!4.05e-08!45;UBERON:0002416!4.05e-08!45;UBERON:0000481!4.63e-08!347;UBERON:0000483!1.02e-07!309;UBERON:0002097!5.96e-07!40;UBERON:0000468!7.91e-07!659 | |||
|ontology_enrichment_uberon_v019=UBERON:0001134;1.83e-13;16!UBERON:0002036;1.83e-13;16!UBERON:0011135;9.00e-13;5!UBERON:0002216;9.00e-13;5!UBERON:0011134;9.00e-13;5!UBERON:0002209;9.00e-13;5!UBERON:0002213;9.00e-13;5!UBERON:0007844;9.00e-13;5!UBERON:0011138;9.00e-13;5!UBERON:0001130;9.00e-13;5!UBERON:0001066;9.00e-13;5!UBERON:0001468;9.00e-13;5!UBERON:0004905;1.06e-10;8!UBERON:0000982;1.06e-10;8!UBERON:0004770;1.06e-10;8!UBERON:0002242;1.45e-08;3!UBERON:0001013;1.14e-07;14!UBERON:0002385;6.77e-07;31!UBERON:0001015;6.77e-07;31!UBERON:0000383;6.77e-07;31 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0011135,1.03e-12,5;UBERON:0002216,1.03e-12,5;UBERON:0011134,1.03e-12,5;UBERON:0002209,1.03e-12,5;UBERON:0002213,1.03e-12,5;UBERON:0005856,1.03e-12,5;UBERON:0005866,1.03e-12,5;UBERON:0005863,1.03e-12,5;UBERON:0007844,1.03e-12,5;UBERON:0011138,1.03e-12,5;UBERON:0001130,1.03e-12,5;UBERON:0001066,1.03e-12,5;UBERON:0001468,1.03e-12,5;UBERON:0000486,4.75e-11,83;UBERON:0004905,7.84e-11,8;UBERON:0000982,7.84e-11,8;UBERON:0004770,7.84e-11,8;UBERON:0002329,3.11e-09,71;UBERON:0003059,3.11e-09,71;UBERON:0007282,3.11e-09,71;UBERON:0004290,3.11e-09,71;UBERON:0009618,3.11e-09,71;UBERON:0003077,4.93e-09,72;UBERON:0007285,4.93e-09,72;UBERON:0007524,7.72e-09,73;UBERON:0002242,1.61e-08,3;UBERON:0003068,1.61e-08,3;UBERON:0002328,1.61e-08,3;UBERON:0004880,1.61e-08,3;UBERON:0007503,6.05e-08,78;UBERON:0001134,8.77e-08,62;UBERON:0002036,8.77e-08,62;UBERON:0003082,8.77e-08,62;UBERON:0002199,8.82e-08,46;UBERON:0002416,8.82e-08,46;UBERON:0001013,1.07e-07,14;UBERON:0002385,2.08e-07,64;UBERON:0001015,2.08e-07,64;UBERON:0000383,2.08e-07,64 | |||
|phase1_expression=0.908391896352783,1.07050261945492,0.704772020479856,1.0007329835313,0.893922188854576,0,0,3.79031924056099,0,0.491467873003018,0.697801167972428,0,0.263766978228454,2.10402800032079,2.65117900582333,0,0.602694528023977,0,0,0,0,0.313454721478088,0,0.136874425072884,0.376627918784408,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.87613732627923,0,0.12786256184353,0,0,0,0,0,0.472674085820339,1.55210578223795,0.43917392846563,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.47274756525787,0.12663051166458,0,0,1.06400514659507,0,0,0,0.311211035399766,0.134710672069688,0,1.05950199351452,0.576175924479999,0,5.30672130611545,1.1409436430889,8.07022874979726,0.23486899728753,0.485618833104395,0.421352420106746,0,0.368502951935304,0,0,0,1.82032272387605,0.718618141816238,0.673344455816265,0.750711119231785,0.277064115484183,0,0.612975591598039,0.600952235626387,0.453728732640084,1.07633781413317,0.427114777637135,1.05965950579781,1.20036438433761,0.721367704669072,1.03056216018252,0.37223371266318,1.85653965465393,0.876933046450788,1.51460264546469,0.828449087780694,0.484938170456436,0.355009592516614,0.705264687593482,1.3564847384839,0,0,0,0,0,0,0,0,0,0,0,0,1.85747171212792,0.721879481669586,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.171567810298526,0,0,0,0.277765335475589,0,0,0,0,0.234817388471643,0.144366447761074,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.897048674762886,0.43596006883328,1.7601188597028,0.258543431515556,0,3.381211010224,0.797814349754612,0,1.80045161983499,0,1.8649552531127,0.285955987316295,0,0,3.90883421152482,0.355391948742546,0,0.602878754119172,0,0.199945982364114,0,0,0,1.91699884393266,0,1.42636905040718,0.289562613335158,4.9314317412092,0,0,0,0,0,0.254094624222463,0,0.773288812777695,0,0.637938751653163,0,0,0,3.0672872929785,3.50119364741774,6.78162559249339,0,0,0,0,0,2.27407504055985,1.03473071292505,0,1.10621501125022,1.65078867489357,4.11182430671755,2.74514739048685,0,0,0,0,3.32870879020994,0,0.496215615637554,0.153461973288062,0.561320188866147,0.768834895534206,0,0.482561763430822,0,9.25258162815933,14.3824997503633,12.8118363381542,9.34657972530518,11.272406710616,0,0,0.0920809889358963,0.229628896329213,3.09554985611419,1.04899531967539,0,0.15403067420883,0.784349769176855,0,0,0,0.170093705276516,0.215915916102139,0,0.541892875087706,0.501689773854853,0,0,0.447749509444357,0,0,0.512900250232778,0.656029291399411,0,0.103041011647722,0,0,0,0,0,2.03008508413456,5.5457502161272,3.37708084397485,4.27293374702045,2.0409846524972,2.32026710262766,2.72725207731523,1.24644849905432,0,0.768760269460425,0.127612712494584,0.10115778085555,1.39453664789186,0,0,0,0.532306030317022,0.869932992075073,0.18532421910392,0.429374660225974,0.744316738719335,1.58189712359363,0.190630193923825,2.303080121802,0.42793898803392,0,0.78494864019923,0.539617372749944,0.274537029736055,0.471249609382746,1.2130948894399,0,0,0,0.731140468893853,0,0,0,1.13008116620243,0,0.66343897524122,0,1.73632660280006,0.655894752046633,0,0.30982349809975,0,0.430234056612155,0.196498082026242,0.35667105148125,2.48332744849418,0.422215270595328,1.97576935775941,0,0.349934720244983,0.0962221127255121,0,0,0,1.29151611801369,1.68471475667626,3.10401107475673,0.918893600827838,0,0,0,0,0,0,0,0,0.106824071127473,0,0.245040215981032,0.185803175125719,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.281338832821026,0.111308705022906,0,0,3.58646378851925,0,0,0,0,0.933118762985422,0.629078458031288,0,0,0,0,0,0,0.0927680981618513,0,0,0,0,0,0,0,0,0,0,0,0.241192877250816,0,0,0,0,0,0.139423744278603,0.0769502585037971,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0884575645033392,0,0,0,0,0.067401132980677,0,0,0,0,0,0,0,0,0.884612114798832,0,0,0.664653872707185,1.323967823502,0.941798755221676,0,0,0,0,0,0,0,0.343972064943233,0,0,0,0.193978032976839,0,0,0,0,0,0,0.0801588202515337,2.13452994739353,0,0.144090417154106,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.558564802544508,0.458320848023367,2.87149209830726,0.199679000498991,0,0.446342914883745,0.134366944973453,0.720599767084807,0,0,0,0,0,0,0,0,0,0,0,0,0,0.121499113316049,0,0.157611414598396,0.209818352539992,0,0.179287339332845,0,0,1.32418394073086,0,0,0,0.653174720218818,0,0,0.340776043570843,0,0,0,0.129282956361551,0,0,0,0.213574825135389,0,0,1.48849806543585,0,0,0,0,0,0,0,0,0,0.122026264901963,0.1251909307065,0,0.221858103073705,0.310482014706917,0,0,0,0,1.17632909849086,0,0,4.17913448083247,0.934853239388898,3.32883516901568,0,0.251567901752575,0,0.228840068396924,1.96600200892211,1.86524640699337,0.147855149989634,0,0.449803112163605,0.310525913752519,1.65882483136342,2.92425886013794,2.08698024724694,0.150257608997218,0,0,0.545545977607678,0.107410557042488,0,0.398095888698616,1.20008329398946,1.37358282073117,1.34699795506368,0,0,0,0,0,0.231522474323834,0,0,0,0,0.17668914594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| |||
|short_description=p1@AB464533 | |||
}} |
Revision as of 12:40, 20 January 2014
Short description: | p1@AB464533 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | No |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_AB464533_5end |
Coexpression cluster: | NA |
Association with transcript: | 129bp_to_AB464533_5end |
EntrezGene: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
cell of skeletal muscle | 1.67e-20 | 9 |
mesenchymal stem cell of adipose | 1.54e-10 | 8 |
skin fibroblast | 1.57e-09 | 23 |
visceral preadipocyte | 4.97e-09 | 3 |
muscle precursor cell | 1.28e-08 | 58 |
myoblast | 1.28e-08 | 58 |
multi-potent skeletal muscle stem cell | 1.28e-08 | 58 |
nucleus pulposus cell of intervertebral disc | 1.61e-08 | 3 |
muscle cell | 4.45e-08 | 55 |
skeletal muscle satellite cell | 5.67e-08 | 3 |
fibroblast | 3.82e-07 | 76 |
electrically responsive cell | 6.77e-07 | 61 |
electrically active cell | 6.77e-07 | 61 |