FFCP PHASE1:Hg19::chr16:81819343..81819380,+: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=5336 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=9066 | |||
|TSSclassifier=strong | |||
|UniProt= | |||
|association_with_transcript=0bp_to_uc010chg.1_5end | |||
|coexpression_cluster_id=C78 | |||
|description=CAGE_peak_4_at_PLCG2_5end | |||
|id=chr16:81819343..81819380,+ | |||
|ontology_enrichment_celltype=CL:0000945!1.23e-38!24;CL:0000826!1.23e-38!24;CL:0000542!1.25e-19!53;CL:0000051!1.25e-19!53;CL:0000838!1.01e-17!52;CL:0000236!1.01e-12!14;CL:0002087!4.13e-10!119;CL:0000785!3.95e-09!2;CL:0000955!3.95e-09!2;CL:0000818!3.95e-09!2;CL:0000954!3.95e-09!2;CL:0000816!3.95e-09!2;CL:0000738!8.12e-09!140;CL:0002031!1.55e-07!124 | |||
|ontology_enrichment_celltype_v019=CL:0000945;3.97e-52;24!CL:0000542;1.61e-14;53!CL:0000236;1.63e-09;13!CL:0000785;3.05e-09;1!CL:0000819;3.05e-09;1!CL:0000946;5.11e-09;1!CL:0000786;5.11e-09;1 | |||
|ontology_enrichment_celltype_v019_2=CL:0000945,4.23e-52,24;CL:0000826,4.23e-52,24;CL:0000542,4.90e-26,53;CL:0000051,4.90e-26,53;CL:0000838,8.03e-23,52;CL:0000785,1.37e-16,2;CL:0000955,1.37e-16,2;CL:0000818,1.37e-16,2;CL:0000954,1.37e-16,2;CL:0000816,1.37e-16,2;CL:0000236,2.01e-13,14;CL:0000817,2.26e-11,3;CL:0002087,1.64e-10,115;CL:0000738,6.25e-10,136;CL:0000819,3.05e-09,1;CL:0000946,4.54e-09,1;CL:0000786,4.54e-09,1;CL:0000980,4.54e-09,1;CL:0002031,1.78e-08,120;CL:0002032,5.67e-08,161;CL:0000837,5.67e-08,161;CL:0000037,1.57e-07,168;CL:0000988,5.20e-07,177 | |||
|ontology_enrichment_development_v019=CL:0000954;1.54e-16;2!CL:0000051;1.61e-14;53!UBERON:0001045;2.31e-09;1 | |||
|ontology_enrichment_disease=DOID:0060058!3.24e-18!10 | |||
|ontology_enrichment_disease_v019=DOID:0060058;7.92e-13;10!DOID:0060073;3.05e-09;1!DOID:8675;3.05e-09;1!DOID:630;5.11e-09;1!DOID:0050177;5.11e-09;1!DOID:12603;5.11e-09;1!DOID:0050427;5.11e-09;1 | |||
|ontology_enrichment_disease_v019_2=DOID:0060058,8.42e-13,10;DOID:0060073,3.05e-09,1;DOID:8675,3.05e-09,1;DOID:12603,5.31e-09,1;DOID:630,5.75e-09,1;DOID:0050177,5.75e-09,1;DOID:0050427,5.75e-09,1 | |||
|ontology_enrichment_uberon=UBERON:0002106!7.73e-12!3;UBERON:0004854!7.73e-12!3;UBERON:0009034!7.73e-12!3;UBERON:0002095!7.73e-12!3;UBERON:0004782!7.73e-12!3;UBERON:0003281!7.73e-12!3;UBERON:0009664!7.73e-12!3;UBERON:0002296!7.73e-12!3;UBERON:0005602!7.73e-12!3;UBERON:0001179!7.73e-12!3;UBERON:0006293!7.73e-12!3;UBERON:0007023!3.26e-09!115;UBERON:0005409!9.88e-09!35;UBERON:0001155!2.82e-07!9 | |||
|ontology_enrichment_uberon_v019=UBERON:0001155;7.39e-14;9!UBERON:0000059;2.26e-11;11!UBERON:0000160;1.86e-10;17!UBERON:0001154;2.31e-09;1!UBERON:0001153;2.31e-09;1!UBERON:0009854;2.31e-09;1!UBERON:0002372;3.31e-09;1!UBERON:0001961;3.31e-09;1!UBERON:0001744;3.31e-09;1!UBERON:0001042;3.31e-09;1!UBERON:0001735;3.31e-09;1!UBERON:0000029;3.87e-09;1!UBERON:0005409;3.82e-08;22!UBERON:0004921;3.23e-07;33 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001155,6.35e-14,9;UBERON:0000059,2.00e-11,11;UBERON:0000160,1.60e-10,17;UBERON:0005409,3.58e-10,25;UBERON:0001154,2.40e-09,1;UBERON:0001153,2.40e-09,1;UBERON:0001045,2.40e-09,1;UBERON:0002372,3.31e-09,1;UBERON:0001961,3.31e-09,1;UBERON:0001744,3.31e-09,1;UBERON:0001735,3.31e-09,1;UBERON:0000029,3.88e-09,1 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,11.5384242679406,9.85207073399349,10.8620878212877,0,0,0,0,0,0,1.16200800870452,14.9277694111793,0,0,0,0.217010870715852,0,0,0.257575567634187,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.199463657621632,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.75996244461323,0,0,0,0,0,0.661044872784862,0,1.1384259382189,1.76171156811282,0.382273228125229,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.109750285408626,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.99161459204025,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.106727557803444,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.206082023295445,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.238231775457789,0,0,0,0,0,0,0,2.78704762688578,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.111443384277478,0,0,0,0,0,0,0,0,0,0,11.0513566212459,0,0,25.2323851195192,0,0,0,0,0.197286811273867,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.98104772431402,1.85760885457012,1.22206028986725,0,0,0,0,0,0,6.02100804411698,0,0,0,1.20990716048664,0,0.31593289814244,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0969890164884194,0,0,0,0,0,0,0,0.426905989478705,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.338693328263138,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.146552233678082,0,0,0,0,0,0,0,0,3.96932817449561,17.1922119751212,54.1977062794987,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.150420656698515,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.99608367645026,0,0,0,0,0,0,0,0,0,0,0,0.142953088353313,0,0,0,0,0,0,0,0.430227358820278,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.11294608203896,0,0,1.85217979459067,0.218559560503957,0,0,0,0,0,0,0,3.00748537535531,0.0644578879735772,0.599646935549574,0,0,0,0,0.458729283404541,0,0,0,0,0.5290268405154,0,0,0,0,0,0,0,0,0,0,0.303114792872958,0,0,0,0.213233981900981,0,0,0,0,0,0,0,0,5.99433271829829,0.502055437748735,0,0,0,0,0,0,0,0,0,1.00636896795513,2.24397944612263 | |||
|short_description=p4@PLCG2 | |||
}} |
Revision as of 12:27, 20 January 2014
Short description: | p4@PLCG2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_4_at_PLCG2_5end |
Coexpression cluster: | C78_lymphoma_plasma_tonsil_appendix_lymph_seminal_trachea |
Association with transcript: | 0bp_to_uc010chg.1_5end |
EntrezGene: | PLCG2 |
HGNC: | 9066 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
lymphocyte of B lineage | 4.23e-52 | 24 |
pro-B cell | 4.23e-52 | 24 |
lymphocyte | 4.90e-26 | 53 |
common lymphoid progenitor | 4.90e-26 | 53 |
lymphoid lineage restricted progenitor cell | 8.03e-23 | 52 |
mature B cell | 1.37e-16 | 2 |
pre-B-II cell | 1.37e-16 | 2 |
transitional stage B cell | 1.37e-16 | 2 |
small pre-B-II cell | 1.37e-16 | 2 |
immature B cell | 1.37e-16 | 2 |
B cell | 2.01e-13 | 14 |
precursor B cell | 2.26e-11 | 3 |
nongranular leukocyte | 1.64e-10 | 115 |
leukocyte | 6.25e-10 | 136 |
B-1 B cell | 3.05e-09 | 1 |
antibody secreting cell | 4.54e-09 | 1 |
plasma cell | 4.54e-09 | 1 |
plasmablast | 4.54e-09 | 1 |
hematopoietic lineage restricted progenitor cell | 1.78e-08 | 120 |
hematopoietic oligopotent progenitor cell | 5.67e-08 | 161 |
hematopoietic multipotent progenitor cell | 5.67e-08 | 161 |
hematopoietic stem cell | 1.57e-07 | 168 |
hematopoietic cell | 5.20e-07 | 177 |
Ontology term | p-value | n |
---|---|---|
colon | 6.35e-14 | 9 |
large intestine | 2.00e-11 | 11 |
intestine | 1.60e-10 | 17 |
gastrointestinal system | 3.58e-10 | 25 |
vermiform appendix | 2.40e-09 | 1 |
caecum | 2.40e-09 | 1 |
midgut | 2.40e-09 | 1 |
tonsil | 3.31e-09 | 1 |
mucosa-associated lymphoid tissue | 3.31e-09 | 1 |
lymphoid tissue | 3.31e-09 | 1 |
tonsillar ring | 3.31e-09 | 1 |
lymph node | 3.88e-09 | 1 |
Ontology term | p-value | n |
---|---|---|
lymphoma | 8.42e-13 | 10 |
lymphatic system cancer | 3.05e-09 | 1 |
lymphosarcoma | 3.05e-09 | 1 |
acute leukemia | 5.31e-09 | 1 |
genetic disease | 5.75e-09 | 1 |
monogenic disease | 5.75e-09 | 1 |
xeroderma pigmentosum | 5.75e-09 | 1 |