FFCP PHASE1:Hg19::chr16:812453..812461,+: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=10232 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=7371 | |||
|TSSclassifier=strong | |||
|UniProt=Q13421 | |||
|association_with_transcript=-132bp_to_ENST00000382862_5end | |||
|coexpression_cluster_id=C68 | |||
|description=CAGE_peak_20_at_MSLN_5end | |||
|id=chr16:812453..812461,+ | |||
|ontology_enrichment_celltype=CL:0002537!4.54e-25!5;CL:0000313!2.75e-14!1;CL:0000159!8.60e-08!2 | |||
|ontology_enrichment_celltype_v019=CL:0002537;2.51e-53;5!CL:0000349;4.52e-32;19!CL:0002541;3.66e-23;3!CL:0000134;3.02e-09;55!CL:0000034;2.09e-08;69 | |||
|ontology_enrichment_celltype_v019_2=CL:0002537,2.19e-53,5;CL:0000349,4.52e-32,19;CL:0002541,4.09e-23,3 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease=DOID:3493!2.74e-27!2;DOID:2152!2.75e-14!1;DOID:299!1.08e-08!25 | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000305!4.17e-18!7;UBERON:0004871!6.33e-16!8;UBERON:0005631!8.02e-16!14;UBERON:0000158!8.02e-16!14;UBERON:0004911!2.75e-14!1;UBERON:0002372!3.15e-14!1;UBERON:0001961!3.15e-14!1;UBERON:0001744!3.15e-14!1;UBERON:0001735!3.15e-14!1;UBERON:0000478!2.45e-09!24;UBERON:0003127!7.03e-08!2;UBERON:0004909!8.60e-08!2 | |||
|ontology_enrichment_uberon_v019=UBERON:0005631;1.10e-59;10!UBERON:0000158;1.10e-59;10!UBERON:0000305;1.64e-38;7!UBERON:0000478;1.16e-25;24!UBERON:0003124;3.66e-23;3!UBERON:0000920;3.66e-23;3 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0005631,4.85e-43,14;UBERON:0000158,4.85e-43,14;UBERON:0000305,1.49e-38,7;UBERON:0004871,6.50e-34,8;UBERON:0000478,1.16e-25,24;UBERON:0000920,4.09e-23,3;UBERON:0003124,9.89e-11,7;UBERON:0004923,4.66e-10,66 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.18714054040822,0,0,0,0,5.49112314896687,0.296964680832639,1.53580351049616,0,0,0,0,0,0,0,0,0,0,0,0,0.179021174675609,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.21787692703798,0,0,0,0,0,0,1.27600463892768,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.235694034616795,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.17071847709395,0,0,0,0,0,0,0,0,0.111855431797792,0.196300467230486,0.121917924982269,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.112131862580613,0,0,0,0,0.0673520530145875,0.143444410785353,0,0,0,0,0,0,0,0,0,0,0 | |||
|short_description=p20@MSLN | |||
}} |
Revision as of 01:43, 12 January 2014
Short description: | p20@MSLN |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_20_at_MSLN_5end |
Coexpression cluster: | C68_amniotic_chorionic_Placental_salivary_placenta_tongue_mesothelioma |
Association with transcript: | -132bp_to_ENST00000382862_5end |
EntrezGene: | MSLN |
HGNC: | 7371 |
UniProt: | Q13421 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
amnion mesenchymal stem cell | 2.19e-53 | 5 |
extraembryonic cell | 4.52e-32 | 19 |
chorionic membrane mesenchymal stem cell | 4.09e-23 | 3 |
Ontology term | p-value | n |
---|---|---|
extraembryonic membrane | 4.85e-43 | 14 |
membranous layer | 4.85e-43 | 14 |
amnion | 1.49e-38 | 7 |
somatic layer of lateral plate mesoderm | 6.50e-34 | 8 |
extraembryonic structure | 1.16e-25 | 24 |
egg chorion | 4.09e-23 | 3 |
chorion | 9.89e-11 | 7 |
organ component layer | 4.66e-10 | 66 |