FFCP PHASE1:Hg19::chr16:67233007..67233061,+: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=79767 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=17289 | |||
|TSSclassifier=strong | |||
|UniProt=F8W9E7,Q96BJ8 | |||
|association_with_transcript=0bp_to_ENST00000360833,ENST00000393997,NM_024712,uc002esa.2,uc002esb.2_5end | |||
|coexpression_cluster_id=C543 | |||
|description=CAGE_peak_1_at_ELMO3_5end | |||
|id=chr16:67233007..67233061,+ | |||
|ontology_enrichment_celltype=CL:0000066!1.30e-20!254;CL:0002076!3.28e-13!43;CL:0000223!2.20e-10!59;CL:0002368!1.59e-09!13;CL:0002159!1.35e-08!13;CL:0002251!9.97e-07!21 | |||
|ontology_enrichment_celltype_v019=CL:0002076;4.46e-14;42!CL:0002368;9.31e-12;13!CL:0002159;1.40e-09;14!CL:0002251;2.23e-08;20!CL:0002202;4.16e-08;9!CL:0002632;4.16e-08;9!CL:0000039;8.60e-07;7!CL:0000586;8.60e-07;7 | |||
|ontology_enrichment_celltype_v019_2=CL:0000066,1.57e-26,253;CL:0002076,2.95e-17,42;CL:0000223,2.16e-14,58;CL:0002368,9.52e-12,13;CL:0002159,1.45e-09,14;CL:0002251,2.25e-08,20;CL:0002202,4.25e-08,9;CL:0002632,4.25e-08,9;CL:0000039,8.18e-07,7;CL:0000586,8.18e-07,7 | |||
|ontology_enrichment_development_v019=CL:0000223;1.78e-08;58 | |||
|ontology_enrichment_disease=DOID:305!2.83e-11!106 | |||
|ontology_enrichment_disease_v019=DOID:1749;4.18e-08;14 | |||
|ontology_enrichment_disease_v019_2=DOID:305,3.33e-12,106;DOID:1749,4.49e-08,14;DOID:0050687,4.68e-08,143 | |||
|ontology_enrichment_uberon=UBERON:0004119!8.25e-22!169;UBERON:0000925!8.25e-22!169;UBERON:0006595!8.25e-22!169;UBERON:0001007!6.79e-16!155;UBERON:0001555!6.79e-16!155;UBERON:0007026!6.79e-16!155;UBERON:0004921!1.88e-13!129;UBERON:0004185!1.88e-13!129;UBERON:0000077!1.63e-12!130;UBERON:0000464!2.72e-11!104;UBERON:0005911!2.98e-11!82;UBERON:0000466!5.25e-11!126;UBERON:0000062!1.06e-10!511;UBERON:0001004!2.55e-10!72;UBERON:0000064!6.60e-10!219;UBERON:0007023!1.51e-09!115;UBERON:0005153!2.55e-09!37;UBERON:0005631!1.17e-08!14;UBERON:0000158!1.17e-08!14;UBERON:0000065!3.41e-08!53;UBERON:0005181!8.19e-08!35;UBERON:0005178!1.56e-07!34;UBERON:0002224!1.56e-07!34;UBERON:0001041!1.78e-07!98;UBERON:0005177!2.40e-07!107;UBERON:0005157!2.64e-07!51;UBERON:0000161!2.80e-07!35;UBERON:0001008!4.79e-07!45;UBERON:0005156!5.94e-07!59;UBERON:0000990!5.94e-07!59;UBERON:0003124!8.53e-07!7 | |||
|ontology_enrichment_uberon_v019=UBERON:0004921;6.93e-10;33!UBERON:0005178;2.55e-09;34!UBERON:0002224;2.55e-09;34!UBERON:0005911;1.82e-08;36!UBERON:0005409;2.08e-08;22!UBERON:0005181;2.54e-08;35!UBERON:0004807;3.45e-08;22!UBERON:0002048;8.57e-08;22!UBERON:0000117;8.57e-08;22!UBERON:0000171;8.57e-08;22!UBERON:0000170;8.57e-08;22!UBERON:0001555;2.26e-07;54!UBERON:0000160;2.33e-07;17!UBERON:0005631;4.35e-07;10!UBERON:0000158;4.35e-07;10!UBERON:0006554;9.02e-07;30!UBERON:0001008;9.02e-07;30 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0004119,5.53e-26,160;UBERON:0000925,5.53e-26,160;UBERON:0006595,5.53e-26,160;UBERON:0001007,1.01e-18,145;UBERON:0001555,1.01e-18,145;UBERON:0007026,1.01e-18,145;UBERON:0004921,3.72e-16,118;UBERON:0005911,9.98e-13,82;UBERON:0001008,1.02e-11,48;UBERON:0005177,1.48e-11,101;UBERON:0006554,3.25e-11,47;UBERON:0005153,6.63e-11,37;UBERON:0005631,8.30e-11,14;UBERON:0000158,8.30e-11,14;UBERON:0001004,1.77e-10,74;UBERON:0005178,3.03e-10,34;UBERON:0002224,3.03e-10,34;UBERON:0005181,9.23e-10,35;UBERON:0005157,3.90e-09,47;UBERON:0001041,6.60e-09,87;UBERON:0000065,9.00e-09,54;UBERON:0009569,1.16e-08,112;UBERON:0003124,3.77e-08,7;UBERON:0002048,8.92e-08,22;UBERON:0000117,8.92e-08,22;UBERON:0000171,8.92e-08,22;UBERON:0000170,8.92e-08,22;UBERON:0005597,8.92e-08,22;UBERON:0000118,8.92e-08,22;UBERON:0000915,1.82e-07,52;UBERON:0000160,2.28e-07,17;UBERON:0000161,2.77e-07,36;UBERON:0005409,6.13e-07,25 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0.261185628199839,5.6518805395347,35.5878595665938,14.1986891884612,24.2665619970177,0.123766352960047,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.309632246632152,34.9380065301992,18.072355126695,21.8154865998405,0,0,0.293600439334847,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.42159801053347,0,0,0,0,0,0,0,0,0,0,0,1.75996244461323,0.546138611262131,0.889509253863555,0,0,3.4485146397269,0.661044872784862,2.86216126360609,1.1384259382189,0.587237189370939,0.382273228125229,1.32171328579026,0,0,0,0,0,0,0,0,0,0,0,0.221533894583621,0,0,0.130059347559878,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.821127996921047,0,0,0,0,0,0,0,0,0.144846518960824,0,0,0,0,0.087834785693126,5.89405839739707,46.2655016131529,26.6964798804789,1.29818957461873,0.522389211897802,0.26591592103773,0,0,0.371457501329565,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,44.4815933185385,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.570471821544449,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,19.1328244631664,10.3643525824517,11.4721838155602,4.14710600840624,5.83130980614535,6.15827897208447,2.798848485415,5.80337957013945,0,0,0,0,0,0,0.236613600079688,0,0.241011029883482,0,0,0,0.269662616320329,0,0,0,0,0.4115740113314,0,10.1404027857465,5.89696330006576,2.95394953340702,0,18.5712542200101,0,21.7305565109079,23.6043681841001,24.1269533787914,26.4802953153395,0,0,0,0,0,0,0,0,11.8530659693891,20.6036678902769,0,0,0,14.9974134378843,12.5986596149145,15.028160307693,9.85143749731331,17.4380363108377,23.3863434290779,0,0,0.414656231081544,0.576479813667846,0.75745460055828,0.126995788584338,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.301439377059586,0,0.299918973546171,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.414415513436035,0,0,0,0,0,0,0,0,0,1.03473071292505,0,0.184369168541703,0,0,0,0,0,0,20.3095472868994,34.9514422972044,21.772101119737,0,0.306923946576125,0,0,0.511707249066704,0,0,0,0,0,0,0,10.6356315640628,11.6293752775905,15.3775251522947,0,0,0.131124414959424,6.31679458070376,4.54390488916047,7.84349769176855,4.38417673959782,2.11103257785751,0,0,0,0,0,1.00337954770971,11.4694322870267,23.2701282500043,3.1342465661105,0,0,0,0.328014645699706,0,9.68585509488589,0,0,9.76251414593493,20.1518676271322,0,0,0,0,0,0,0,0,0,13.0575083135173,12.8767345134621,77.2056910592234,15.274824909188,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,16.9350918396901,22.119975092681,39.2007545500761,8.66122967146368,26.260827732945,38.7484394035539,35.0309821293974,21.5939996194542,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,36.4924053796029,0,0,0,0,38.6766065275058,13.6603753183014,38.7022484645032,0,0.140669416410513,0,0,0,2.19172787076177,7.73594963487214,17.383359601945,0,0,0,10.3348603819426,22.5566680091268,0,4.43895325366201,0,0,0,0.278304294485554,0,0,55.0997999976033,2.89999830173917,25.1483520710954,22.3743212257634,33.567050811047,0,0,0,0,1.08536794762867,0,6.19243855614858,1.77328571372128,0,0,17.0096968019896,2.30850775511391,0,11.528195219403,11.8480090620899,19.0132900863514,24.8820904590897,4.21348929648567,30.9160170090808,0,0,0,0,0,0,0,0,0,12.2424606119361,16.9623685720729,0,52.7488823471608,30.517859753652,21.3860550726769,0,0,0,0,0.802577647298789,0,0,19.7621265121411,0,32.7505054364994,15.7287930863263,0,0.126373159256976,0,0,0,0,0,0,0,0,0,14.1109052276704,19.5883214805906,9.60996675331166,0,0.870806981601766,0.511625219603299,1.64230914106418,11.4447039456335,0,2.25980740780532,0,0,0,14.4708023223754,11.863505397227,16.8627865844089,0,27.233088842126,0,0.171594997861965,0.288109595976299,0,22.6266273232124,0,0,0,0,0,0.273810757783986,0,0,0,0,0,0,2.99518500748487,0.429226048136571,0,0,0,0,0,0,0,0,0,0,0.272406812223151,4.66184130548556,3.30094647833361,4.15440338029185,1.1248694577575,17.0236430002749,0.121499113316049,34.8852075103237,12.1360789240765,9.59918962870465,0,0,13.0502334177223,0.714695326373367,0,0,0,0,0,0,0,0,0,2.4913879725274,5.30027555648885,0,0,0,53.5659416960671,6.40724475406168,5.50215067848831,8.28478110694391,0.992332043623902,0,0,28.7253565996582,0,0,0,0,0,0,0,0.3755727921195,0.573409195690071,0.665574309221114,0.124192805882767,0,0,0,0,0,1.40500471742064,1.01444720027578,0,0,0,0,0,0,0,0,0,0,0,0,0.155262956876259,0,0,0,0.150257608997218,0.380805212168795,0.406870733204662,0,0,0,0,0,0,0,0,0,16.5120025358693,0,0,0,0,0,5.86722749605847,0,0,4.43702288023104,2.36519416914302,0,0,0,0.829550616910385,0.194860308839388,0,0.163565394255844,0,0,11.1995425380072,0,0,0,0,0,17.7646974803694,18.6623178009892,0,0,0,0,0,0,0,0,0,0,12.8091319725675,0,0,0.128458450192919,0,1.11743701340006,0,0,0.0691572524642179,0,0,19.8258391372072,13.4485484616424,11.0057159113007,7.62469396592232,0,0,0,0.752103283492572,0,24.2269343482259,9.95245439029405,0.163771917510097,11.8284868973636,0.202612753855184,0,0.620060389503552,0.253663240775627,0,19.7372796068586,1.98484471355718,0,10.4765190664468,0,2.35398605553177,26.7064865864118,24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| |||
|short_description=p1@ELMO3 | |||
}} |
Revision as of 11:53, 20 January 2014
Short description: | p1@ELMO3 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_ELMO3_5end |
Coexpression cluster: | C543_Alveolar_Corneal_Urothelial_amniotic_Esophageal_Tracheal_esophagus |
Association with transcript: | 0bp_to_ENST00000360833, ENST00000393997, NM_024712, uc002esa.2, uc002esb.2_5end |
EntrezGene: | ELMO3 |
HGNC: | 17289 |
UniProt: | F8W9E7Q96BJ8 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
epithelial cell | 1.57e-26 | 253 |
endo-epithelial cell | 2.95e-17 | 42 |
endodermal cell | 2.16e-14 | 58 |
respiratory epithelial cell | 9.52e-12 | 13 |
general ecto-epithelial cell | 1.45e-09 | 14 |
epithelial cell of alimentary canal | 2.25e-08 | 20 |
epithelial cell of tracheobronchial tree | 4.25e-08 | 9 |
epithelial cell of lower respiratory tract | 4.25e-08 | 9 |
germ line cell | 8.18e-07 | 7 |
germ cell | 8.18e-07 | 7 |
Ontology term | p-value | n |
---|---|---|
endoderm-derived structure | 5.53e-26 | 160 |
endoderm | 5.53e-26 | 160 |
presumptive endoderm | 5.53e-26 | 160 |
digestive system | 1.01e-18 | 145 |
digestive tract | 1.01e-18 | 145 |
primitive gut | 1.01e-18 | 145 |
subdivision of digestive tract | 3.72e-16 | 118 |
endo-epithelium | 9.98e-13 | 82 |
renal system | 1.02e-11 | 48 |
trunk region element | 1.48e-11 | 101 |
urinary system structure | 3.25e-11 | 47 |
epithelial bud | 6.63e-11 | 37 |
extraembryonic membrane | 8.30e-11 | 14 |
membranous layer | 8.30e-11 | 14 |
respiratory system | 1.77e-10 | 74 |
thoracic cavity element | 3.03e-10 | 34 |
thoracic cavity | 3.03e-10 | 34 |
thoracic segment organ | 9.23e-10 | 35 |
epithelial fold | 3.90e-09 | 47 |
foregut | 6.60e-09 | 87 |
respiratory tract | 9.00e-09 | 54 |
subdivision of trunk | 1.16e-08 | 112 |
chorion | 3.77e-08 | 7 |
lung | 8.92e-08 | 22 |
respiratory tube | 8.92e-08 | 22 |
respiration organ | 8.92e-08 | 22 |
pair of lungs | 8.92e-08 | 22 |
lung primordium | 8.92e-08 | 22 |
lung bud | 8.92e-08 | 22 |
thoracic segment of trunk | 1.82e-07 | 52 |
intestine | 2.28e-07 | 17 |
orifice | 2.77e-07 | 36 |
gastrointestinal system | 6.13e-07 | 25 |
Ontology term | p-value | n |
---|---|---|
carcinoma | 3.33e-12 | 106 |
squamous cell carcinoma | 4.49e-08 | 14 |
cell type cancer | 4.68e-08 | 143 |