FFCP PHASE1:Hg19::chr16:23194084..23194089,+: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=6340 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=10602 | |||
|TSSclassifier=strong | |||
|UniProt=A5X2V1,P51170 | |||
|association_with_transcript=44bp_to_NM_001039,uc002dlm.1_5end | |||
|coexpression_cluster_id=C63 | |||
|description=CAGE_peak_3_at_SCNN1G_5end | |||
|id=chr16:23194084..23194089,+ | |||
|ontology_enrichment_celltype=CL:0002322!1.98e-10!5;CL:0002623!8.04e-08!3 | |||
|ontology_enrichment_celltype_v019=CL:0002623;4.43e-15;3!CL:0002553;9.60e-12;1!CL:0000150;4.15e-11;9!CL:0000622;2.04e-09;5!CL:0000154;5.45e-08;6 | |||
|ontology_enrichment_celltype_v019_2=CL:0002623,4.28e-15,3;CL:0002553,5.62e-12,1;CL:0000150,4.85e-11,9;CL:0000622,2.00e-09,5;CL:0000154,5.36e-08,6 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease=DOID:171!6.76e-08!10 | |||
|ontology_enrichment_disease_v019=DOID:3193;9.43e-07;2!DOID:962;9.43e-07;2 | |||
|ontology_enrichment_disease_v019_2=DOID:3193,9.44e-07,2;DOID:962,9.44e-07,2 | |||
|ontology_enrichment_uberon=UBERON:0001044!6.35e-14!6;UBERON:0003293!6.35e-14!6;UBERON:0003294!6.35e-14!6;UBERON:0010047!6.35e-14!6;UBERON:0000167!6.35e-14!6;UBERON:0007023!1.69e-13!115;UBERON:0003408!2.25e-13!10;UBERON:0002530!8.36e-07!59;UBERON:0000078!8.58e-07!18 | |||
|ontology_enrichment_uberon_v019=UBERON:0001044;2.28e-16;6!UBERON:0003293;2.28e-16;6!UBERON:0003294;2.28e-16;6!UBERON:0010047;2.28e-16;6!UBERON:0003408;2.28e-16;6!UBERON:0000167;2.28e-16;6!UBERON:0001041;3.15e-12;14!UBERON:0000996;9.60e-12;1!UBERON:0001389;9.60e-12;1!UBERON:0000026;9.60e-12;1!UBERON:0008784;9.60e-12;1!UBERON:0006058;9.60e-12;1!UBERON:0003663;9.60e-12;1!UBERON:0004256;9.60e-12;1!UBERON:0004708;9.60e-12;1!UBERON:0002101;9.60e-12;1!UBERON:0004709;9.60e-12;1!UBERON:0002529;9.60e-12;1!UBERON:0010538;9.60e-12;1!UBERON:0003661;9.60e-12;1!UBERON:0010890;9.60e-12;1!UBERON:0002471;9.60e-12;1!UBERON:0001383;9.60e-12;1!UBERON:0010758;9.60e-12;1!UBERON:0010707;9.60e-12;1!UBERON:0000978;9.60e-12;1!UBERON:0002103;9.60e-12;1!UBERON:0001665;9.60e-12;1!UBERON:0003823;9.60e-12;1!UBERON:0000154;9.60e-12;1!UBERON:0010709;9.60e-12;1!UBERON:0003714;9.43e-07;2 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001044,2.47e-16,6;UBERON:0003293,2.47e-16,6;UBERON:0003294,2.47e-16,6;UBERON:0010047,2.47e-16,6;UBERON:0000167,2.47e-16,6;UBERON:0000996,5.05e-12,1;UBERON:0005418,1.07e-11,1;UBERON:0001389,1.07e-11,1;UBERON:0000026,1.07e-11,1;UBERON:0008784,1.07e-11,1;UBERON:0006058,1.07e-11,1;UBERON:0003663,1.07e-11,1;UBERON:0004256,1.07e-11,1;UBERON:0004708,1.07e-11,1;UBERON:0002101,1.07e-11,1;UBERON:0004709,1.07e-11,1;UBERON:0002529,1.07e-11,1;UBERON:0010538,1.07e-11,1;UBERON:0003661,1.07e-11,1;UBERON:0010890,1.07e-11,1;UBERON:0002471,1.07e-11,1;UBERON:0001383,1.07e-11,1;UBERON:0004357,1.07e-11,1;UBERON:0004347,1.07e-11,1;UBERON:0005420,1.07e-11,1;UBERON:0005732,1.07e-11,1;UBERON:0010758,1.07e-11,1;UBERON:0010707,1.07e-11,1;UBERON:0000978,1.07e-11,1;UBERON:0002103,1.07e-11,1;UBERON:0001665,1.07e-11,1;UBERON:0003823,1.07e-11,1;UBERON:0000154,1.07e-11,1;UBERON:0010709,1.07e-11,1;UBERON:0005733,1.07e-11,1;UBERON:0005730,1.07e-11,1;UBERON:0003408,4.96e-10,10;UBERON:0003714,9.44e-07,2 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0764134057479513,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.622822248995575,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.0478326039817,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.258416759169329,0,0.33472061276467,0,0,0.24406205754817,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.365921118388786,0.132529768321485,0.464775771478074,0.207322110030741,0.252320850875628,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.858486162094873,0,0,0,0,0,0,0.985143749731331,0.871901815541886,0,0,0,0.207328115540772,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.167516265334349,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.200506470303285,0,0,0,0,0,0,0,0,0.105551628892876,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.206082023295445,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.376575203107117,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.140669416410513,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0927680981618513,0,0.260427761085233,0,0,0,0,0,0,1.45802306691627,0,0,0,1.52581736317083,0.995213339381022,0,0,0,0.278847488557207,0.230850775511391,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0884575645033392,0,0,0,0,0,0,0,0,0,0,0.394584402849391,0,0,0,0.60129367765797,0,0,0,0,0,0,0.138674673013139,0,0,0,0,0,0,0,0,0.775912131907355,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.229160424011684,0,0,0,0.223171457441873,0.0671834724867263,0,0,0,0,0,0,0,0,0.136203406111576,0,0.137539436597234,0.415440338029185,0.674921674654501,0,0,0,2.44297692627514,2.98991152369489,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.854299300541557,2.04365596629566,0.414239055347196,0,0,0,0,0,0,0,0,0.157054096250234,0,0.122026264901963,0,0,0.110929051536852,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.07220795687463,0,0,0,0,0,1.54400723580486,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.139879507719444,0,0,0,0.943595651135378,0,0.848662649770126,0.212574920101683,11.6499618403462,3.35186950783946,0,0,1.60114149657094,0,0,0.0642292250964595,0,0.159633859057151,0,0.756215088665154,0,0.322951291263702,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.546974809018219,0.548257766857182,0.496211178389294,0.175871244359621,0.255524855279191,0,0,0.606965604236632,0.91064876540519,0,0,0,0,0,0,0,0.235479278551542,0,0,0,0,0,0,0,0,0,0,0.207216164163037,2.90221411059715,1.38251932362818,1.29068207646083,0.236664001461131,0.170426809518315,0,0,0,0,0,0,0,1.29485767437579,0,0,0,0.233939463462106,0,0,0,0,0.452888530700021,0,0,0.940634592723046,0,0,0,0,0,0,0,0,0,0,0.352894871715692,0,1.46067277649303,0.458729283404541,0,0,0,0.436350690340377,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.426467963801962,1.1903221573187,0.193766729508018,0.186224142887574,0,1.20929600728513,0.202117188958219,0.217716747896961,0,0.202056159043763,0.717222053926764,0,0,0,0,0,0,0.488965776731466,0.406896178315738,1.99727032255654,0,0 | |||
|short_description=p3@SCNN1G | |||
}} |
Revision as of 02:46, 12 January 2014
Short description: | p3@SCNN1G |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_3_at_SCNN1G_5end |
Coexpression cluster: | C63_neuroectodermal_neuroblastoma_carcinoid_peripheral_chronic_neuroepithelioma_acute |
Association with transcript: | 44bp_to_NM_001039, uc002dlm.1_5end |
EntrezGene: | SCNN1G |
HGNC: | 10602 |
UniProt: | A5X2V1P51170 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
acinar cell of salivary gland | 4.28e-15 | 3 |
lung fibroblast | 5.62e-12 | 1 |
glandular epithelial cell | 4.85e-11 | 9 |
acinar cell | 2.00e-09 | 5 |
protein secreting cell | 5.36e-08 | 6 |
Ontology term | p-value | n |
---|---|---|
saliva-secreting gland | 2.47e-16 | 6 |
gland of oral region | 2.47e-16 | 6 |
gland of foregut | 2.47e-16 | 6 |
oral gland | 2.47e-16 | 6 |
oral cavity | 2.47e-16 | 6 |
vagina | 5.05e-12 | 1 |
hindlimb bud | 1.07e-11 | 1 |
soleus muscle | 1.07e-11 | 1 |
appendage | 1.07e-11 | 1 |
lower limb segment | 1.07e-11 | 1 |
multi-limb segment region | 1.07e-11 | 1 |
hindlimb muscle | 1.07e-11 | 1 |
hindlimb zeugopod muscle | 1.07e-11 | 1 |
paired limb/fin | 1.07e-11 | 1 |
limb | 1.07e-11 | 1 |
pelvic appendage | 1.07e-11 | 1 |
limb segment | 1.07e-11 | 1 |
paired limb/fin segment | 1.07e-11 | 1 |
limb muscle | 1.07e-11 | 1 |
pelvic complex muscle | 1.07e-11 | 1 |
zeugopod | 1.07e-11 | 1 |
muscle of leg | 1.07e-11 | 1 |
paired limb/fin bud | 1.07e-11 | 1 |
limb bud | 1.07e-11 | 1 |
pelvic appendage bud | 1.07e-11 | 1 |
limb/fin field | 1.07e-11 | 1 |
subdivision of organism along appendicular axis | 1.07e-11 | 1 |
appendage girdle complex | 1.07e-11 | 1 |
leg | 1.07e-11 | 1 |
hindlimb | 1.07e-11 | 1 |
triceps surae | 1.07e-11 | 1 |
hindlimb zeugopod | 1.07e-11 | 1 |
posterior region of body | 1.07e-11 | 1 |
pelvic complex | 1.07e-11 | 1 |
limb field | 1.07e-11 | 1 |
hindlimb/pelvic fin field | 1.07e-11 | 1 |
gland of gut | 4.96e-10 | 10 |
neural tissue | 9.44e-07 | 2 |
Ontology term | p-value | n |
---|---|---|
peripheral nerve sheath neoplasm | 9.44e-07 | 2 |
neurofibroma | 9.44e-07 | 2 |