FFCP PHASE1:Hg19::chr15:78423863..78423880,-: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=10518 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=24579 | |||
|TSSclassifier=strong | |||
|UniProt=Q05BT6,O75838 | |||
|association_with_transcript=0bp_to_ENST00000539011,NM_006383,uc002bdb.1,uc002bdc.1,uc010ums.1_5end | |||
|description=CAGE_peak_5_at_CIB2_5end | |||
|id=chr15:78423863..78423880,- | |||
|ontology_enrichment_celltype=CL:0000133!4.43e-07!59 | |||
|ontology_enrichment_celltype_v019=CL:0002322;4.14e-12;5!CL:0002319;3.77e-10;25!CL:0002577;5.19e-08;3!CL:0000128;5.60e-08;7!CL:0000126;5.60e-08;7!CL:0000127;5.60e-08;7!CL:0002603;1.89e-07;3!CL:0000540;4.13e-07;6!CL:0000404;4.13e-07;6!CL:1000449;4.47e-07;15 | |||
|ontology_enrichment_celltype_v019_2=CL:0002322,4.11e-12,5;CL:0000047,2.93e-11,8;CL:0000133,9.71e-11,59;CL:0002319,1.66e-10,25;CL:0000221,6.46e-09,72;CL:0000128,2.21e-08,7;CL:0000126,2.21e-08,7;CL:0000127,2.21e-08,7;CL:0002453,2.21e-08,7;CL:0002577,3.30e-08,3;CL:0002603,5.22e-08,3;CL:0000540,2.53e-07,6;CL:0000031,2.53e-07,6;CL:0000404,2.53e-07,6;CL:1000449,6.75e-07,15 | |||
|ontology_enrichment_development_v019=CL:0000031;4.13e-07;6 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0005743!1.49e-10!86;UBERON:0001017!1.62e-09!82;UBERON:0000073!2.89e-09!94;UBERON:0001016!2.89e-09!94;UBERON:0000489!2.03e-08!32;UBERON:0000064!6.89e-08!219;UBERON:0000481!1.33e-07!347;UBERON:0003075!2.30e-07!86;UBERON:0007284!2.30e-07!86;UBERON:0000119!3.95e-07!312;UBERON:0002113!4.03e-07!27;UBERON:0003918!4.03e-07!27;UBERON:0005095!4.03e-07!27;UBERON:0007687!4.03e-07!27;UBERON:0000483!8.77e-07!309;UBERON:0002346!9.78e-07!90 | |||
|ontology_enrichment_uberon_v019=UBERON:0002113;3.27e-08;24!UBERON:0011143;3.27e-08;24!UBERON:0000489;8.28e-08;29!UBERON:0006554;1.81e-07;30!UBERON:0001008;1.81e-07;30!UBERON:0006555;4.47e-07;15!UBERON:0004819;4.47e-07;15!UBERON:0001285;4.47e-07;15!UBERON:0007684;4.47e-07;15 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002113,2.65e-07,26;UBERON:0003918,2.65e-07,26;UBERON:0011143,2.65e-07,26;UBERON:0005095,2.65e-07,26;UBERON:0007687,2.65e-07,26;UBERON:0000489,5.27e-07,31;UBERON:0004211,6.75e-07,15;UBERON:0009773,6.75e-07,15;UBERON:0001231,6.75e-07,15;UBERON:0001285,6.75e-07,15;UBERON:0007684,6.75e-07,15;UBERON:0004208,6.75e-07,15;UBERON:0006554,9.59e-07,47 | |||
|phase1_expression=0,0,0,1.0007329835313,0,0,0,0.631719873426831,0.522371256399677,0,2.09340350391728,0.655324116390517,1.31883489114227,0.495065411840187,0,0,0,0,0.487932798790507,1.60057375499824,1.42800483870977,1.88072832886853,0.572471974262113,1.64249310087461,1.12988375635323,0.382067028739756,0.410502947249729,0.0787107813136792,0,0,0.309632246632152,0,0,0.369754010166788,0,0,0.587200878669695,0,0.200544447470142,0,0,0,0,0,0,0,0,0.411167888021826,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.382273228125229,0,0,0.526768169550154,0,0,0,0,0,0,0,0.111410456885174,0,0,0,0.128091319725675,0,0,0,0,0,0.267540828089713,0,0,0,0,0,0,0,0,0.150575119077773,0.127986611154418,0,0,0,0.201606743224732,0,0.144824403882799,0,2.01210257911091,0.895037932904712,0,0.50133791063589,0,0.795285947051099,0,0.472674085820339,1.33037638477538,1.14185221401064,2.16115474571226,0,0,0,0,0,1.19245312152671,0.571994910780128,1.11437250398869,0.198762407366705,0,0,0,0,0,0.208994966536811,0,0,0,1.20848795132744,0,0.732186172644509,0,0,0,0.22452937262617,0,0,0,0,0,0,0.436094052142534,0,0.379891534993739,0,0,0,0.560677600142307,1.06748995729705,1.2333377420858,0,0.404132016209064,0,0.302714855289863,0,0.234321431833797,0,0,0,0.352303495931295,0.161872944368132,0.421352420106746,0,0,0,0,0.247266929278557,0,0,0,0.500474079487857,0,0,0,0,0.113432183160021,0.179389635688862,0.427114777637135,0.635795703478686,0.300091096084402,0.309157587715317,0,0.18611685633159,0,0.194874010322397,0,0.0920498986422993,0.161646056818812,0,0.302256294682921,0.847802961552438,0,0,0,1.70763188581434,1.32529768321485,1.04574548582567,2.38420426535352,2.27088765788066,2.55484151353081,1.56449532329816,0.643240938192885,0,0,0,0.118306800039844,0,0,0.110293972732394,0,0,0.404493924480493,0,0,0.738155454624648,1.40241773803446,0.8231480226628,0,0,0,0,0.441463099414651,0.122988438543114,1.54411029268673,0.329250856225877,1.1240175325762,0.201057944823262,0.0925884451585296,0,0,0,1.73895607462615,0.352226082707465,0,0,1.14152491340759,0,0,0,0,0,0.93733833986777,0.16798212819886,0.141775097242386,0,0,0.383382679165211,0,0,0.207328115540772,0,0,0.317489471460845,0.763976851116555,2.34434894420094,0,0.616964956219941,0.600686115687835,1.71495859578347,0.336393253036082,0.43596006883328,0.2933531432838,0.129271715757778,0,0,0.531876233169741,0,0.771622122786426,0,0.266422179016099,0,0.542621605391443,0.823240336780769,0,0,0,0.301439377059586,0,0.99972991182057,0,0,0,0.718874566474748,0,0,0.144781306667579,0.205476322550383,0.179060963239896,0.672510863961164,0,0.215627574859517,0.128343036279748,1.27047312111232,2.60279707715243,0,2.17771144934653,0.637938751653163,0,0,0,0,0.500170521059677,0.271265023699736,0,0.356857977594324,0.788512075169673,0.234282829985426,0.601892199455438,0,0,0.664225598535437,0.553107505625109,0.173767228936166,0.783204629850962,1.02943027143257,0,0,0,1.21251028578504,6.65741758041988,1.81434175997808,0,0.306923946576125,0.841980283299221,0,0,0.482561763430822,1.48418066444991,0,0.177561725313127,0.0821271560138091,0,0,0,0,0,0,0,0,0.902399225814824,1.00119938235739,5.49044838423799,1.46139224653261,0.949964660035881,0,0.510281115829547,0.215915916102139,1.54227252690289,1.08378575017541,2.00675909541941,0,0.831076008928724,0.895499018888713,0,0,0.256450125116389,0.656029291399411,0.976135183992909,0.103041011647722,0.457847324091717,0.082509499920588,0,0,0,0.386682873168488,0.462145851343933,0.307007349452259,0.137836572484531,0.214840489736547,0,0.511359764496605,0.623224249527161,0,0.192190067365106,0,0,0,0,0,0,0.532306030317022,0,0.18532421910392,0,1.116475108079,0,0.571890581771475,0.255897791311334,0,0,0,0.179872457583315,0.54907405947211,0.117812402345686,0,0,0.421258456238981,0.48763373908959,0,0,0.136499911407986,0,0,0,0,0,0,0,0,0.30982349809975,0.281695602532241,0,0.0982490410131212,0.35667105148125,0,0.211107635297664,0.329294892959902,0.379473173765715,0.699869440489966,0,0,0,0.0941438007767792,0.86101074534246,0,0.443430153536676,0.229723400206959,0,0,0,0,0,0,0,0,1.49553699578462,10.5872784078969,0,0.185803175125719,0,0.142283686696828,0.318852545457645,0.199579371432817,0.191505370132367,0,0,0,0,0,0,0,0.1605880751037,0,0,0,0.307240764308458,0,0,0.19538809540204,0,0,0,0,0,0,0.146508179271894,1.09224469574562,0,0.284136146806413,0,0,0.614321404198464,0,0.281338832821026,0,0,0.844501632511974,0.398495976502139,0,0.251932747854276,0.715880777515084,0,0,0.0898683511473268,0,0,0.197286811273867,0,0,0,0.0927680981618513,3.99227596002388,0,0,0,0.1137934482855,0.508507300585533,0.709163045303809,0.344743373241465,0,2.08349993919951,0,0.120596438625408,0,0.110579259931225,0,0,0,0,0.307801034015188,0.227884111694002,0.69169171316418,0.269272933229316,0.325942115766024,0,0.0915975934018623,0.533034776018635,0,0,0.166211681900156,0.225595660617181,0.588187602953219,0.335643173951685,0,0.158936578980379,0,0,0.141353071433941,0,0,0.353830258013357,1.22206028986725,0.296521128680622,0.123563938946503,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| |||
|short_description=p5@CIB2 | |||
}} |
Revision as of 00:43, 12 January 2014
Short description: | p5@CIB2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_5_at_CIB2_5end |
Coexpression cluster: | NA |
Association with transcript: | 0bp_to_ENST00000539011, NM_006383, uc002bdb.1, uc002bdc.1, uc010ums.1_5end |
EntrezGene: | CIB2 |
HGNC: | 24579 |
UniProt: | Q05BT6O75838 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
embryonic stem cell | 4.11e-12 | 5 |
neuronal stem cell | 2.93e-11 | 8 |
neurectodermal cell | 9.71e-11 | 59 |
neural cell | 1.66e-10 | 25 |
ectodermal cell | 6.46e-09 | 72 |
oligodendrocyte | 2.21e-08 | 7 |
macroglial cell | 2.21e-08 | 7 |
astrocyte | 2.21e-08 | 7 |
oligodendrocyte precursor cell | 2.21e-08 | 7 |
placental epithelial cell | 3.30e-08 | 3 |
astrocyte of the cerebellum | 5.22e-08 | 3 |
neuron | 2.53e-07 | 6 |
neuroblast | 2.53e-07 | 6 |
electrically signaling cell | 2.53e-07 | 6 |
epithelial cell of nephron | 6.75e-07 | 15 |
Ontology term | p-value | n |
---|---|---|
kidney | 2.65e-07 | 26 |
kidney mesenchyme | 2.65e-07 | 26 |
upper urinary tract | 2.65e-07 | 26 |
kidney rudiment | 2.65e-07 | 26 |
kidney field | 2.65e-07 | 26 |
cavitated compound organ | 5.27e-07 | 31 |
nephron epithelium | 6.75e-07 | 15 |
renal tubule | 6.75e-07 | 15 |
nephron tubule | 6.75e-07 | 15 |
nephron | 6.75e-07 | 15 |
uriniferous tubule | 6.75e-07 | 15 |
nephrogenic mesenchyme | 6.75e-07 | 15 |
urinary system structure | 9.59e-07 | 47 |