FFCP PHASE1:Hg19::chr15:74422892..74422903,+: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
Line 1: | Line 1: | ||
{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=57611 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=29286 | |||
|TSSclassifier=weak | |||
|UniProt=Q6UXK2 | |||
|association_with_transcript=149bp_to_ENST00000453268,NM_020851,uc010bjf.2_5end | |||
|coexpression_cluster_id=C10 | |||
|description=CAGE_peak_8_at_ISLR2_5end | |||
|id=chr15:74422892..74422903,+ | |||
|ontology_enrichment_celltype=CL:0000047!1.02e-07!8 | |||
|ontology_enrichment_celltype_v019=CL:0000540;2.75e-25;6!CL:0000404;2.75e-25;6!CL:0002319;4.02e-10;25!CL:0000047;1.12e-09;2 | |||
|ontology_enrichment_celltype_v019_2=CL:0000047,2.61e-33,8;CL:0000540,2.33e-25,6;CL:0000031,2.33e-25,6;CL:0000404,2.33e-25,6;CL:0002319,3.83e-10,25 | |||
|ontology_enrichment_development_v019=CL:0000031;2.75e-25;6 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001869!2.40e-41!32;UBERON:0000073!1.20e-39!94;UBERON:0001016!1.20e-39!94;UBERON:0005743!1.65e-39!86;UBERON:0001017!2.69e-39!82;UBERON:0001893!1.16e-38!34;UBERON:0002780!1.08e-37!41;UBERON:0001890!1.08e-37!41;UBERON:0006240!1.08e-37!41;UBERON:0003080!1.13e-36!42;UBERON:0002791!4.95e-36!33;UBERON:0002619!3.73e-35!22;UBERON:0002020!7.53e-35!34;UBERON:0003528!7.53e-35!34;UBERON:0000956!1.24e-34!25;UBERON:0000203!1.24e-34!25;UBERON:0001950!2.67e-34!20;UBERON:0000955!6.76e-31!69;UBERON:0006238!6.76e-31!69;UBERON:0002616!2.80e-29!59;UBERON:0003056!3.14e-28!61;UBERON:0001049!5.43e-28!57;UBERON:0005068!5.43e-28!57;UBERON:0006241!5.43e-28!57;UBERON:0007135!5.43e-28!57;UBERON:0002346!4.04e-24!90;UBERON:0003075!1.59e-23!86;UBERON:0007284!1.59e-23!86;UBERON:0000924!3.88e-23!173;UBERON:0006601!3.88e-23!173;UBERON:0004121!2.05e-22!169;UBERON:0000153!3.03e-20!129;UBERON:0007811!3.03e-20!129;UBERON:0000033!4.36e-20!123;UBERON:0007023!3.27e-17!115;UBERON:0001871!3.97e-15!7;UBERON:0000200!3.37e-14!6;UBERON:0001872!1.84e-11!5;UBERON:0002771!1.03e-10!3;UBERON:0000369!1.59e-08!4;UBERON:0002435!1.59e-08!4;UBERON:0000204!1.59e-08!4;UBERON:0010082!1.59e-08!4;UBERON:0002360!2.01e-07!2;UBERON:0000094!2.01e-07!2;UBERON:0007645!2.01e-07!2;UBERON:0002021!4.20e-07!5 | |||
|ontology_enrichment_uberon_v019=UBERON:0001882;1.12e-17;1!UBERON:0002022;1.12e-17;1!UBERON:0005403;1.12e-17;1!UBERON:0001950;4.94e-13;20!UBERON:0002619;6.29e-12;22!UBERON:0002791;9.23e-12;32!UBERON:0001869;1.53e-11;32!UBERON:0003528;4.96e-11;34!UBERON:0002020;4.96e-11;34!UBERON:0000956;1.38e-10;25!UBERON:0000203;1.38e-10;25!UBERON:0000922;6.81e-10;49!UBERON:0001893;1.65e-09;34!UBERON:0002780;5.23e-09;41!UBERON:0001890;5.23e-09;41!UBERON:0000073;1.82e-07;53!UBERON:0002616;1.82e-07;53!UBERON:0001016;3.26e-07;83!UBERON:0001017;5.45e-07;75!UBERON:0002114;5.97e-07;2 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001017,3.85e-19,81;UBERON:0002022,1.22e-17,1;UBERON:0001882,1.44e-17,1;UBERON:0005403,1.44e-17,1;UBERON:0001016,3.38e-17,89;UBERON:0001950,5.10e-13,20;UBERON:0002791,1.30e-12,32;UBERON:0001869,1.30e-12,32;UBERON:0002619,6.47e-12,22;UBERON:0003528,6.78e-12,34;UBERON:0002020,6.78e-12,34;UBERON:0001893,6.78e-12,34;UBERON:0000956,1.41e-10,25;UBERON:0000203,1.41e-10,25;UBERON:0002780,6.42e-10,41;UBERON:0001890,6.42e-10,41;UBERON:0003080,6.42e-10,41;UBERON:0006240,6.42e-10,41;UBERON:0004121,1.07e-08,171;UBERON:0000924,1.07e-08,171;UBERON:0006601,1.07e-08,171;UBERON:0000955,2.51e-08,68;UBERON:0006238,2.51e-08,68;UBERON:0011216,5.99e-08,223;UBERON:0000073,1.03e-07,53;UBERON:0002616,1.03e-07,53;UBERON:0001049,2.63e-07,56;UBERON:0005068,2.63e-07,56;UBERON:0006241,2.63e-07,56;UBERON:0007135,2.63e-07,56;UBERON:0002114,5.80e-07,2 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.123121058076788,0,0,0,0,0.251085279189606,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.130979075497713,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.151357427644931,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.121973706129595,0,0,0,0,0.72995471815166,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.34779121492523,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.31960861178188,0,1.54657762555539,5.52803675603351,1.91381625495949,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.160853921143607,0,0,0.177561725313127,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.422008249231538,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.969332746095218,0.463840490809256,1.99613798001194,0,0,0,0,0,0,0.344743373241465,0,0,0,0.60298219312704,0,0,0,0.438770794307945,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.234264445725339,0,0,0,0,0,11.0186194186976,0.063186579628488,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0969890164884194,0,0,0,0,0.633107959558787,0,0,0,0.19980960958213,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.671834724867263,0,0,0,0,0,0,0,0,0.136203406111576,0,0,0,0,0,1.33649024647654,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.488105059607853,0.1251909307065,0,0,0,0,0,0,0,0,0,0.434763085832475,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.398095888698616,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.553033744606923,0,0,0,0,0,0,0,0,0,0,0,0,0,0.255788742607303,0,0,0.218419276384028,0,0.637724760305049,0,0,0,0,0.80057074828547,0,0,1.22035527683273,0,0,0.615349092722265,6.04972070932123,0.622415272177961,0.645902582527404,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.540300676947157,0,0.206686796501184,0.380494861163441,3.82882366312754,0,0,0,0,0,0,0,0,0,0,0,0,0.657727735628491,0,0,0,0.314231179832004,0,0,0,0,0.142953088353313,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.102662806856247,1.1598144313382,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.157771562193185,0.543931921527318,11.3451179488498,0,0,0,0,0,0,0,0,0,0,0,0,0.267964130156178,0,0.103432995861895,0,0.23806443146374,0,0,0,0,0,0,0.684466602170562,0,0,0,0,0,0,0,0,0,0,0,0.201273793591026,0 | |||
|short_description=p8@ISLR2 | |||
}} |
Revision as of 00:29, 12 January 2014
Short description: | p8@ISLR2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | No |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_8_at_ISLR2_5end |
Coexpression cluster: | C10_occipital_temporal_parietal_brain_duodenum_Neurons_Neural |
Association with transcript: | 149bp_to_ENST00000453268, NM_020851, uc010bjf.2_5end |
EntrezGene: | ISLR2 |
HGNC: | 29286 |
UniProt: | Q6UXK2 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
neuronal stem cell | 2.61e-33 | 8 |
neuron | 2.33e-25 | 6 |
neuroblast | 2.33e-25 | 6 |
electrically signaling cell | 2.33e-25 | 6 |
neural cell | 3.83e-10 | 25 |
Ontology term | p-value | n |
---|---|---|
central nervous system | 3.85e-19 | 81 |
insula | 1.22e-17 | 1 |
nucleus accumbens | 1.44e-17 | 1 |
ventral striatum | 1.44e-17 | 1 |
nervous system | 3.38e-17 | 89 |
neocortex | 5.10e-13 | 20 |
regional part of telencephalon | 1.30e-12 | 32 |
cerebral hemisphere | 1.30e-12 | 32 |
regional part of cerebral cortex | 6.47e-12 | 22 |
brain grey matter | 6.78e-12 | 34 |
gray matter | 6.78e-12 | 34 |
telencephalon | 6.78e-12 | 34 |
cerebral cortex | 1.41e-10 | 25 |
pallium | 1.41e-10 | 25 |
regional part of forebrain | 6.42e-10 | 41 |
forebrain | 6.42e-10 | 41 |
anterior neural tube | 6.42e-10 | 41 |
future forebrain | 6.42e-10 | 41 |
ectoderm-derived structure | 1.07e-08 | 171 |
ectoderm | 1.07e-08 | 171 |
presumptive ectoderm | 1.07e-08 | 171 |
brain | 2.51e-08 | 68 |
future brain | 2.51e-08 | 68 |
organ system subdivision | 5.99e-08 | 223 |
regional part of nervous system | 1.03e-07 | 53 |
regional part of brain | 1.03e-07 | 53 |
neural tube | 2.63e-07 | 56 |
neural rod | 2.63e-07 | 56 |
future spinal cord | 2.63e-07 | 56 |
neural keel | 2.63e-07 | 56 |
duodenum | 5.80e-07 | 2 |