FFCP PHASE1:Hg19::chr15:72102881..72102925,+: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=10002 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_ncRNA | |||
|HGNC=7974 | |||
|TSSclassifier=strong | |||
|UniProt=B6ZGU0,Q9Y5X4,F1D8Q9 | |||
|association_with_transcript=0bp_to_ENST00000398840,NM_014249,NM_016346,uc002ath.1,uc002ati.2_5end | |||
|coexpression_cluster_id=C40 | |||
|description=CAGE_peak_1_at_NR2E3_5end | |||
|id=chr15:72102881..72102925,+ | |||
|ontology_enrichment_celltype=CL:0000064!4.94e-21!3;CL:0005012!4.94e-21!3;CL:0000067!4.94e-21!3;CL:0002304!4.94e-21!3 | |||
|ontology_enrichment_celltype_v019=CL:0000306;3.42e-11;4!CL:0002222;3.42e-11;4!CL:0002224;3.42e-11;4 | |||
|ontology_enrichment_celltype_v019_2=CL:0000306,3.42e-11,4;CL:0002222,3.42e-11,4;CL:0002224,3.42e-11,4 | |||
|ontology_enrichment_development_v019=UBERON:0003056;1.68e-53;3 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001905!1.37e-31!2;UBERON:0002757!1.37e-31!2;UBERON:0010134!1.37e-31!2;UBERON:0002784!1.37e-31!2;UBERON:0005408!1.37e-31!2;UBERON:0001899!1.37e-31!2;UBERON:0000970!1.89e-27!20;UBERON:0002104!3.86e-26!21;UBERON:0000020!7.36e-24!23;UBERON:0001032!7.33e-23!24;UBERON:0004456!7.33e-23!24;UBERON:0001778!4.94e-21!3;UBERON:0001775!4.94e-21!3;UBERON:0000019!3.08e-20!19;UBERON:0000047!3.08e-20!19;UBERON:0004088!3.08e-20!19;UBERON:0003072!3.08e-20!19;UBERON:0003071!3.08e-20!19;UBERON:0004128!3.08e-20!19;UBERON:0001456!2.54e-18!21;UBERON:0003296!2.44e-16!4;UBERON:0010133!2.44e-16!4;UBERON:0000488!4.87e-16!4;UBERON:0000966!1.74e-13!5;UBERON:0005388!1.74e-13!5;UBERON:0001802!1.74e-13!5;UBERON:0005085!2.75e-13!29;UBERON:0007625!4.47e-13!11;UBERON:0003056!1.05e-11!61;UBERON:0002203!5.09e-11!6;UBERON:0001768!5.09e-11!6;UBERON:0001801!2.10e-10!14;UBERON:0001894!9.52e-10!7;UBERON:0006222!9.52e-10!7;UBERON:0003075!3.36e-08!86;UBERON:0007284!3.36e-08!86;UBERON:0001444!5.03e-08!48;UBERON:0002346!8.12e-08!90 | |||
|ontology_enrichment_uberon_v019=UBERON:0000966;1.23e-32;5!UBERON:0005388;1.23e-32;5!UBERON:0001802;1.23e-32;5!UBERON:0000970;3.13e-32;20!UBERON:0002104;9.67e-31;21!UBERON:0000020;3.80e-28;23!UBERON:0001032;5.19e-27;24!UBERON:0004456;5.19e-27;24!UBERON:0001905;6.96e-21;2!UBERON:0002757;6.96e-21;2!UBERON:0010134;6.96e-21;2!UBERON:0005408;6.96e-21;2!UBERON:0001899;6.96e-21;2!UBERON:0000019;1.48e-19;19!UBERON:0000047;1.48e-19;19!UBERON:0004088;1.48e-19;19!UBERON:0010230;1.48e-19;19!UBERON:0001456;8.78e-18;21!UBERON:0010077;3.42e-11;4!UBERON:0005389;3.42e-11;4!UBERON:0000484;3.42e-11;4!UBERON:0000965;3.42e-11;4!UBERON:0001803;3.42e-11;4!UBERON:0003296;3.79e-11;4!UBERON:0010133;3.79e-11;4!UBERON:0002784;3.79e-11;4!UBERON:0001444;4.61e-07;48!UBERON:0001894;6.39e-07;7 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000970,9.67e-31,21;UBERON:0002104,9.67e-31,21;UBERON:0000966,2.08e-27,6;UBERON:0005388,2.08e-27,6;UBERON:0001802,2.08e-27,6;UBERON:0000020,5.19e-27,24;UBERON:0001032,5.19e-27,24;UBERON:0004456,5.19e-27,24;UBERON:0001905,6.96e-21,2;UBERON:0002757,6.96e-21,2;UBERON:0010134,6.96e-21,2;UBERON:0005408,6.96e-21,2;UBERON:0001899,6.96e-21,2;UBERON:0000019,1.26e-18,20;UBERON:0000047,1.26e-18,20;UBERON:0010312,1.26e-18,20;UBERON:0004088,1.26e-18,20;UBERON:0010230,1.26e-18,20;UBERON:0003072,1.26e-18,20;UBERON:0004128,1.26e-18,20;UBERON:0003071,1.26e-18,20;UBERON:0001456,5.13e-17,22;UBERON:0005085,2.48e-12,31;UBERON:0010077,3.42e-11,4;UBERON:0005389,3.42e-11,4;UBERON:0000484,3.42e-11,4;UBERON:0002546,3.42e-11,4;UBERON:0000965,3.42e-11,4;UBERON:0001803,3.42e-11,4;UBERON:0003073,3.42e-11,4;UBERON:0005426,3.42e-11,4;UBERON:0003296,3.79e-11,4;UBERON:0010133,3.79e-11,4;UBERON:0002784,3.79e-11,4;UBERON:0003056,6.84e-11,61;UBERON:0003075,2.69e-08,82;UBERON:0007284,2.69e-08,82;UBERON:0001444,4.32e-08,49;UBERON:0002346,6.09e-08,86;UBERON:0000033,3.60e-07,56;UBERON:0001894,6.39e-07,7;UBERON:0006222,6.39e-07,7 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0945348171640679,0,0.263504357079378,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.24605133930215,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.173559738335131,0,0,0,0,0,0,0,0,0,44.970167415326,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.464033759878494,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.132864840313363,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.60710550763486,0.336283722218824,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,47.1030426124165,12.0090344916872,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.109265571963696,0,0.203977659483963,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | |||
|short_description=p1@NR2E3 | |||
}} |
Revision as of 00:23, 12 January 2014
Short description: | p1@NR2E3 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_NR2E3_5end |
Coexpression cluster: | C40_eye_retina_Lens_pineal_tongue_retinoblastoma_small |
Association with transcript: | 0bp_to_ENST00000398840, NM_014249, NM_016346, uc002ath.1, uc002ati.2_5end |
EntrezGene: | NR2E3 |
HGNC: | 7974 |
UniProt: | B6ZGU0Q9Y5X4F1D8Q9 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
crystallin accumulating cell | 3.42e-11 | 4 |
vertebrate lens cell | 3.42e-11 | 4 |
lens epithelial cell | 3.42e-11 | 4 |