FFCP PHASE1:Hg19::chr15:48937146..48937172,-: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
Line 1: | Line 1: | ||
{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=2200 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=3603 | |||
|TSSclassifier=strong | |||
|UniProt= | |||
|association_with_transcript=-117bp_to_ENST00000558230_5end | |||
|description=CAGE_peak_8_at_FBN1_5end | |||
|id=chr15:48937146..48937172,- | |||
|ontology_enrichment_celltype=CL:0000055!3.13e-28!180;CL:0000057!1.71e-23!75;CL:0002620!3.03e-13!23;CL:0000048!2.60e-09!430;CL:0000723!1.49e-08!436;CL:0000680!3.65e-08!57;CL:0000056!3.65e-08!57;CL:0000355!3.65e-08!57;CL:0000034!1.32e-07!444;CL:0002494!3.06e-07!16;CL:0000187!5.75e-07!54 | |||
|ontology_enrichment_celltype_v019=CL:0002620;1.66e-10;23 | |||
|ontology_enrichment_celltype_v019_2=CL:0000057,9.73e-15,76;CL:0000048,2.38e-11,427;CL:0000723,5.84e-11,433;CL:0000034,1.86e-10,441;CL:0002620,2.34e-10,23;CL:0002320,7.10e-08,361;CL:0000134,3.34e-07,354 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019=DOID:17;2.69e-08;5!DOID:450;2.69e-08;5!DOID:66;2.69e-08;5!DOID:423;2.69e-08;5!DOID:0080000;2.69e-08;5!DOID:11722;2.69e-08;5 | |||
|ontology_enrichment_disease_v019_2=DOID:17,1.84e-08,5;DOID:450,1.84e-08,5;DOID:66,1.84e-08,5;DOID:423,1.84e-08,5;DOID:0080000,1.84e-08,5;DOID:11722,1.84e-08,5 | |||
|ontology_enrichment_uberon=UBERON:0000914!5.40e-12!83;UBERON:0002329!5.40e-12!83;UBERON:0003077!5.40e-12!83;UBERON:0003059!5.40e-12!83;UBERON:0007282!5.40e-12!83;UBERON:0009618!5.40e-12!83;UBERON:0007285!5.40e-12!83;UBERON:0004923!2.87e-10!57;UBERON:0004290!4.10e-10!70;UBERON:0000486!8.59e-09!82;UBERON:0002199!9.01e-09!45;UBERON:0002416!9.01e-09!45;UBERON:0002097!1.13e-08!40;UBERON:0000948!3.24e-08!24;UBERON:0005498!3.24e-08!24;UBERON:0004140!3.24e-08!24;UBERON:0009881!3.24e-08!24;UBERON:0004141!3.24e-08!24;UBERON:0003084!3.24e-08!24;UBERON:0007005!3.24e-08!24;UBERON:0004139!3.24e-08!24;UBERON:0004291!3.24e-08!24;UBERON:0003102!5.53e-08!95;UBERON:0002385!7.53e-08!63;UBERON:0001015!7.53e-08!63;UBERON:0000383!7.53e-08!63;UBERON:0004872!1.16e-07!84;UBERON:0001134!1.53e-07!61;UBERON:0002036!1.53e-07!61;UBERON:0003082!1.53e-07!61;UBERON:0007100!3.22e-07!27 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002384,1.99e-08,371;UBERON:0004923,1.49e-07,66;UBERON:0002097,6.43e-07,41 | |||
|phase1_expression=0.54503513781167,0.428201047781966,1.12763523276777,0,1.34088328328186,0.872338524100369,0,0,0.783556884599516,0,0,0.655324116390517,0.791300934685361,0.123766352960047,1.98838425436749,0,1.20538905604795,0,0,0,0.408001382488506,0,0,0,0.251085279189606,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,7.31420598941885,1.34140171940727,0.767175371061182,1.44575660953827,0.50133791063589,1.88300474649071,1.5905718941022,0.973269740605272,0.378139268656271,0,0.527008714158756,0,0,0,0,0,0,0,0,0,0.39752481473341,0,0.347140501607594,0,0,0.275118041940067,0,0.258416759169329,0.35576626268671,0.66944122552934,0.805658634218294,0,0,0.367663080345869,0,0.267899184852239,0,0.112611480483322,0,0,0,0,0,0,1.49091585508596,0.759783069987479,3.44263870114369,6.59724227722272,0.354668382198357,1.68203280042692,0,0.98667019366864,1.55605517699883,1.34710672069688,0.817309515567294,1.66493170409425,1.72852777344,0.70296429550139,0.936480230490962,0,0.896692083310806,0.23486899728753,0.647491777472526,0.421352420106746,0.816616685019573,0.245668634623536,0.309977343527296,0,1.7308685049499,0,0,0.336672227908132,0.250237039743928,1.6623846929051,0.438977620880838,0.919463387397059,1.95309476578576,0.680593098960126,1.97328599257748,2.13557388818567,0.635795703478686,4.20127534518163,1.23663035086127,2.57640540045629,1.11670113798954,2.19409231913646,0.876933046450788,1.26216887122057,1.01254888506529,0.80823028409406,1.77504796258307,1.10827308050404,0.67824236924195,0,0,0,0,0,0,0,0,0,1.56449532329816,0.643240938192885,1.38134921352481,0,0.721879481669586,0.236613600079688,0.168584690078102,0,0.330881918197182,0,0,0.134831308160164,0.196221465125346,0,0,0,0.4115740113314,0,0,0,0,0,0,0.343135620597051,0,0,0,0,0.651616610620649,0,0,0.463721619900307,1.76113041353732,0,0.462985512576611,0.380508304469197,0,0,0,0,0,0,0,0,0.0895585227028483,0,0,0,0,0,0,0,0.063497894292169,0,0,0,0.102827492703324,0,0,0.224262168690721,0,0.36669142910475,1.16344544182,0,0,2.12750493267896,0,0,0,0,1.14382394926518,0.542621605391443,0,0.325736184293735,0.355391948742546,0,0.301439377059586,0,0.199945982364114,0,0,0,1.19812427745791,0,0,1.15825045334063,1.2328579353023,0.537182889719687,0,0,0,0,0.254094624222463,0,0,0,0,0,0,0,0.12269149171914,0,1.35632511849868,0.623912584592421,1.42743191037729,1.10391690523754,0.35142424497814,1.20378439891088,4.5481500811197,1.03473071292505,0.664225598535437,0.921845842708516,0.0868836144680828,0,0.343143423810856,0,0,0,0,0,0,1.73675465473144,0.920771839728375,1.40330047216537,2.56278298511402,1.53512174720011,0.804269605718038,0,0.462629081407967,0.355123450626254,0.328508624055237,0,0.464841513839837,0,0,0,1.49258782613989,0,1.18011973463482,0,0,0,0,0,0,0.850468526382578,0.431831832204279,0,0,0,0,0,0,0,0,0,0,0.325378394664303,0.206082023295445,0.0915694648183434,0,0,0,1.6068392984416,0.48335359146061,0.308097234229289,0.15350367472613,0.275673144969061,0.429680979473094,0.145016693914229,0.340906509664404,0.445160178233687,0,0,0,0,0,3.77774816196768,1.3940745403212,0.616067160352178,1.06461206063404,0,0.9266210955196,0.715624433709956,0,1.2655176988749,0.953150969619124,0,0.42793898803392,0.318203247925937,0,1.2591072030832,0.54907405947211,0.353437207037059,0.404364963146632,0,0.421258456238981,0,0.243713489631284,0,1.22849920267187,0.565621727814851,2.26016233240486,1.10273068709225,0,1.75380354101505,0,0,0,0,0.281695602532241,0,0.88424136911809,1.07001315444375,0,1.47775344708365,0.658589785919804,0,0,0,0,0,0.376575203107117,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.425846237690326,0,0,0,0,0,0,0,0,0,0,0,0.146508179271894,0,0,0,4.29740072527842,0.890894042497916,3.99308912729002,0,0,0.556543525114529,0,0,0.796991953004279,0,0,0.20453736500431,0,0.933118762985422,0,0,0,0.0986434056369336,0,3.33410970433911,0,0,0,0,0,0.724999575434793,0,0,0,0,0,0,0,0,0,0,0,0,0.21787692703798,0,0.230850775511391,8.77353830021909,0,0,0,1.91400695839152,0.457987967009312,5.86338253620498,0,0,0,0,0,0,0,0,0,0.489698424477443,0,0,0,0,0,0,0,0.104421949505455,0,0.802577647298789,0.468528891450678,0,0,0,0,0,0,1.32691817219825,0,0,0,0,0,0,0,0,0,0,0,0.17472666824203,0,0,0.0730893170861856,0,0.484945082442097,0,0,0,0.19871461170299,0,0,0,0.426905989478705,0,0,0,0,0,0.124252535565433,0,0.67952103036807,0.209205692624666,0,0.866851769704557,0,0,0,0,0,0.279282401272254,0.229160424011684,1.43574604915363,0,0,0.223171457441873,0.268733889946905,0,0,0,0,0,0.0984274815147488,0.677386656526276,0,0.136203406111576,0,0.137539436597234,0,0,0,0.121499113316049,0,0,0.104909176269996,0,0,0,0,0,0,2.17199840701485,0.864221491201268,0.326587360109409,0,0.656740165994712,0.170388021785422,0,0,1.32506888912221,0,0,0,0,0.213574825135389,0.471612915298998,0.414239055347196,0,0,0,0,2.72008901684737,2.0055191521816,0.919036730290385,0.655745261419609,0,0,0,0.1251909307065,0,0.110929051536852,0.18628920882415,0,0,0,0,0,0,0,0.447764408660622,0.934853239388898,0.554805861502613,0.378806010550178,0,0.889811221596536,1.37304041038154,0.604923695052956,0.310874401165561,0.443565449968902,0.159296767163702,0.899606224327209,0.621051827505038,0,0.53168342911599,1.04349012362347,0.450772826991655,1.14241563650639,1.22061219961398,0.909243296012797,0.322231671127465,1.39210127963548,0.796191777397232,0.400027764663154,0,0.336749488765919,3.78554694685953,0,0.214441591374926,0,0.226705925512272,0.231522474323834,0.489473409012935,0.179088841081487,0.308801447160972,0,0.176689145945881,0,0,0,0,0,0,0,0,0.163565394255844,0,0.491545817507439,0,0,0,0,0.567515953566836,0.552317850755522,0,0,0,0.107824811396682,0,0.109209638192014,0,0,0,0,0.636008701306837,0,0,1.05802783107205,1.2249819094128,0,0,0.638535436228605,0,0.252071696221718,0.0691572524642179,0,0,0,0.11796972334774,0,0,0.381382095467167,0,0,0.225630985047772,0,0.781514011233092,0,0.327543835020193,0,0.0675375846183947,0.781078098613847,0.413373593002368,0,0,0,0,0,0,0,0.336283722218824,0,0.227662191351298,1.06442844195167,0,0,0.135939465953663,0,0,0,0,0,0,0,0,0,0.142953088353313,0,0,0.173858272302579,0,0,0.3414369541879,0.691259661814092,0,0,0.0852134047591577,0,0,0,0,0,0,0,0,0,0,0.485710993059139,0,0,0,0,0,0,0.154348316215889,0.218559560503957,0,0.245148321753905,0,0.196308467114945,0,0.8453114551668,1.0195626881269,0.281951753939561,0.128915775947154,0,0,0,0,0,0,0.143339583151451,0.788857810965923,0.135982980381829,0,0,0.371995018166751,1.38652688589425,0.865253124247578,0,0,0.126698501011437,0,0,0,0,0.0757786982182394,0.267964130156178,0,0,0,0.714193294391221,0,0,0.33639558774184,0.12729431655633,0.202117188958219,0,0,0.0673520530145875,0.143444410785353,0.332660356546013,0.0814032686109745,0,0,0.0898252021065869,0,0.488965776731466,0.813792356631477,0,0,0.320568492303233 | |||
|short_description=p8@FBN1 | |||
}} |
Revision as of 23:25, 11 January 2014
Short description: | p8@FBN1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_8_at_FBN1_5end |
Coexpression cluster: | NA |
Association with transcript: | -117bp_to_ENST00000558230_5end |
EntrezGene: | FBN1 |
HGNC: | 3603 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
fibroblast | 9.73e-15 | 76 |
multi fate stem cell | 2.38e-11 | 427 |
somatic stem cell | 5.84e-11 | 433 |
stem cell | 1.86e-10 | 441 |
skin fibroblast | 2.34e-10 | 23 |
connective tissue cell | 7.10e-08 | 361 |
mesenchymal cell | 3.34e-07 | 354 |
Ontology term | p-value | n |
---|---|---|
connective tissue | 1.99e-08 | 371 |
organ component layer | 1.49e-07 | 66 |
skin of body | 6.43e-07 | 41 |
Ontology term | p-value | n |
---|---|---|
musculoskeletal system disease | 1.84e-08 | 5 |
myotonic disease | 1.84e-08 | 5 |
muscle tissue disease | 1.84e-08 | 5 |
myopathy | 1.84e-08 | 5 |
muscular disease | 1.84e-08 | 5 |
myotonic dystrophy | 1.84e-08 | 5 |