FFCP PHASE1:Hg19::chr15:45927015..45927026,+: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
Line 1: | Line 1: | ||
{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=58472 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=20390 | |||
|TSSclassifier=strong | |||
|UniProt=Q9Y6N5 | |||
|association_with_transcript=14bp_to_ENST00000260324_5end | |||
|description=CAGE_peak_4_at_SQRDL_5end | |||
|id=chr15:45927015..45927026,+ | |||
|ontology_enrichment_celltype=CL:0002194!2.13e-09!63;CL:0000576!2.13e-09!63;CL:0000040!2.13e-09!63;CL:0000559!2.13e-09!63;CL:0000766!2.14e-09!76;CL:0002009!3.03e-09!65;CL:0002057!2.69e-08!42;CL:0000860!4.08e-08!45;CL:0000839!4.44e-08!70;CL:0000557!8.85e-08!71 | |||
|ontology_enrichment_celltype_v019=CL:0000235;4.20e-14;6!CL:0000473;1.48e-08;39!CL:0000234;1.48e-08;39!CL:0000775;2.76e-08;3!CL:0000094;9.87e-07;8 | |||
|ontology_enrichment_celltype_v019_2=CL:0000235,4.94e-14,6;CL:0000766,2.16e-09,72;CL:0000473,6.80e-09,48;CL:0000234,6.80e-09,48;CL:0000775,2.49e-08,3;CL:0002194,9.11e-07,59;CL:0000576,9.11e-07,59;CL:0000040,9.11e-07,59;CL:0000559,9.11e-07,59;CL:0000094,9.17e-07,8 | |||
|ontology_enrichment_development_v019=UBERON:0000358;7.74e-07;1 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0004119!7.97e-10!169;UBERON:0000925!7.97e-10!169;UBERON:0006595!7.97e-10!169;UBERON:0002390!2.19e-08!102;UBERON:0003061!2.19e-08!102;UBERON:0001007!4.34e-08!155;UBERON:0001555!4.34e-08!155;UBERON:0007026!4.34e-08!155;UBERON:0002193!5.94e-08!112;UBERON:0002371!7.92e-08!80;UBERON:0002405!6.46e-07!115;UBERON:0004921!8.44e-07!129;UBERON:0004185!8.44e-07!129 | |||
|ontology_enrichment_uberon_v019=UBERON:0001389;6.21e-07;1!UBERON:0000026;6.21e-07;1!UBERON:0008784;6.21e-07;1!UBERON:0006058;6.21e-07;1!UBERON:0003663;6.21e-07;1!UBERON:0004256;6.21e-07;1!UBERON:0004708;6.21e-07;1!UBERON:0002101;6.21e-07;1!UBERON:0004709;6.21e-07;1!UBERON:0002529;6.21e-07;1!UBERON:0010538;6.21e-07;1!UBERON:0003661;6.21e-07;1!UBERON:0010890;6.21e-07;1!UBERON:0002471;6.21e-07;1!UBERON:0001383;6.21e-07;1!UBERON:0010758;6.21e-07;1!UBERON:0010707;6.21e-07;1!UBERON:0000978;6.21e-07;1!UBERON:0002103;6.21e-07;1!UBERON:0001665;6.21e-07;1!UBERON:0003823;6.21e-07;1!UBERON:0000154;6.21e-07;1!UBERON:0010709;6.21e-07;1 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0005418,6.23e-07,1;UBERON:0001389,6.23e-07,1;UBERON:0000026,6.23e-07,1;UBERON:0008784,6.23e-07,1;UBERON:0006058,6.23e-07,1;UBERON:0003663,6.23e-07,1;UBERON:0004256,6.23e-07,1;UBERON:0004708,6.23e-07,1;UBERON:0002101,6.23e-07,1;UBERON:0004709,6.23e-07,1;UBERON:0002529,6.23e-07,1;UBERON:0010538,6.23e-07,1;UBERON:0003661,6.23e-07,1;UBERON:0010890,6.23e-07,1;UBERON:0002471,6.23e-07,1;UBERON:0001383,6.23e-07,1;UBERON:0004357,6.23e-07,1;UBERON:0004347,6.23e-07,1;UBERON:0005420,6.23e-07,1;UBERON:0005732,6.23e-07,1;UBERON:0010758,6.23e-07,1;UBERON:0010707,6.23e-07,1;UBERON:0000978,6.23e-07,1;UBERON:0002103,6.23e-07,1;UBERON:0001665,6.23e-07,1;UBERON:0003823,6.23e-07,1;UBERON:0000154,6.23e-07,1;UBERON:0010709,6.23e-07,1;UBERON:0005733,6.23e-07,1;UBERON:0005730,6.23e-07,1 | |||
|phase1_expression=0,0,0.140954404095971,0,0,0,0,0.631719873426831,0.261185628199839,0.245733936501509,0,0,0,0.247532705920093,0.331397375727916,0,0.602694528023977,0,0,0,0,0,0,0,0,0.0764134057479513,0.0821005894499457,0.0787107813136792,0.393364276848904,0,0.464448369948228,0.919421224478927,0.6024118375565,1.10926203050036,0,0,0.293600439334847,0,0.401088894940283,0.434021741431704,0,0,0,0.145398238779565,1.13362783106643,0.242584061187816,0.697287110717054,0.411167888021826,0.619412741790207,0,0.512321413058201,1.18241114944293,0.344745680736619,0,0,0.564727018627814,0.818718450173537,0,0.918251677112708,0,0.639337125799041,0,0.598390972864896,2.13112375266347,0.580418477257168,0,0.622822248995575,1.25624332628372,0,1.08594422352558,0,1.10483290796269,0.632924774881769,0,0,0.209658645508376,0.336985893439485,0.150176892841506,0.16072558669708,0.570025487482497,0.39783335439818,0.730656615058536,0,0.546138611262131,0,0,0,1.14950487990897,0.661044872784862,0,0,0,0,0,0,0,0,0,0,0.167186495390678,0.32592226663359,0,0,0.111410456885174,0.589211814949674,0.443067789167242,0.270803863765016,0.384273959177026,0.130059347559878,0.493313713811028,0,0,0,0,1.04535523804977,0.226618685395132,0,0.34362744548263,0.253019692019503,0,0,0,0.150575119077773,0,0,0,0,0,0.267440195783507,0.289648807765598,0,0,0,0,0,0.144846518960824,0,0,0,0,0,0.196468613246569,0,0.741568885568859,0.649094787309367,0.522389211897802,0.398873881556595,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0892997282840798,0,0,0,0,0,3.9534125230819,0,0,0,0.12663051166458,0.132409180813219,0,0,0,0,0,0,0.134710672069688,0,0,0,0.234321431833797,1.5608003841516,0,0.149448680551801,0.117434498643765,0,0.140450806702248,0.204154171254893,0,0.103325781175765,0,0.247266929278557,0,1.43723628363248,0,0,0.554128230968366,0,0,0,0,0,0.427114777637135,0.423863802319124,0,0,0,0.18611685633159,0,0,0.252433774244115,0,0.646584227275248,0,0,0,0.966304265816484,0.272746120590835,0.286804595389004,0,0,0,0,0,0,0,0,0,0,0.721879481669586,0.118306800039844,0,0,0.441175890929576,0.217879444092406,0.237270619111097,0.674156540800822,0.392442930250692,0,0,0,0,0,1.26755034821831,0.982827216677626,0,0,0.491953754172454,0.343135620597051,0.329250856225877,1.1240175325762,0.100528972411631,1.01847289674383,0,0,0,0,0,0.288732895522148,0,0.190254152234598,0,0,0.246217006087397,1.40402559083543,0.743155811443641,0.93733833986777,0.503946384596579,0.283550194484773,0.447792613514241,0,0.383382679165211,0,0,0.207328115540772,0,0,0,0,0,0,0.102827492703324,0,0,0,0,0.07333828582095,0,0,0.845302752556,0,0,0.257207374262142,0,0,0,0,0,0,0,0.791951872933429,0,0,0,1.2162378064119,1.00451418286425,2.10833939483032,0,0,0,0.144781306667579,0.205476322550383,0,0.112085143993527,0.394061520403854,0,0.385029108839245,0,0,0,0.167516265334349,0,2.99602809578873,0,2.90090859405225,0.24538298343828,0,0,0,0,0.315404830067869,0,0,0,1.03473071292505,0,0,0.0868836144680828,0,0,0.413536052245775,0.647142602455851,0.106727557803444,0,0,0,0.496215615637554,0.153461973288062,0,0.384417447767103,0,0.160853921143607,1.48418066444991,0.154209693802656,0,0,0,0.116210378459959,0,0,0.644566922551274,0,0.182091168006717,0.131124414959424,0.902399225814824,0.308061348417659,0,0,0.316654886678627,0,0,0,0,0.541892875087706,0,0,0,0.223874754722178,0.219259876645935,0,0,0,0,0.103041011647722,0,0,0.574265537996172,0,0,0,0,0,0,0.107420244868274,0,0.170453254832202,0.0890320356467374,0.991709492165869,0.192190067365106,0.638063562472921,0.50578890427775,0,0.31481234683064,0,0,0,0.869932992075073,0,0.143124886741991,0.372158369359667,0,0,0,0,0,0,0.179872457583315,0.274537029736055,0,0.202182481573316,0,0,0.48763373908959,0.487426979262569,1.05650146756755,0.136499911407986,0.282810863907425,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.329294892959902,0,0.349934720244983,0.48111056362756,0,1.08890984861323,0.282431402330337,0.86101074534246,3.36942951335251,0.443430153536676,0.459446800413919,0,0.764637207142375,0.569647187174163,0.476463550915578,0,0,0.540031437238115,0,0.106824071127473,0,0,0,0,0,0,0,0.191505370132367,0,0,0,0,0.47003968731907,0,0,0,0,0,0.343505344755765,0,0.223676107892416,0,0.390776190804081,0,0,0,0,0,0.18714054040822,0.439524537815682,0,0.222886768554957,0.568272293612826,0.47748896947538,0,0,0,0,0.222617410045812,0.329607748453519,0,0.19924798825107,0,0,0,0.246169610922139,0,0,1.79021174675609,0,0.197286811273867,0,1.11136990144637,0,0,0,0,0.699679999969566,0,0.1137934482855,0,0.709163045303809,0,0,0,0,0,0,0,0,0,0,0.41827123283581,0.153900517007594,0.683652335082007,0,0,0,0,0,0.533034776018635,0,0,0,0,0,0,0,0,0.210998064528027,0,0,0,1.99052386215701,0.530745387020035,0,0.593042257361244,0.247127877893006,0,0,0,0,0,0,0.242780379534093,0.394584402849391,0,0,0.505492637027904,0,0,0,0,0.313932918407225,0,0,0.138674673013139,0,0.0979923974143777,0,0.52418000472609,0,0.0967563312890851,0.219267951258557,0,0.193978032976839,0,0,0.137041924646751,0.19871461170299,0,0.195551382734803,0.721429382263803,0,0,0.144090417154106,0,0,0.14405479798815,0.124252535565433,0.942776138467182,0,0,0.101998217636322,0,0,0,0,0,0.262887354279314,0,0.229160424011684,0,0,0.429226048136571,0,0.0671834724867263,0,0,0.0787831823072236,0.0824158583811665,0.0674035438541849,0.492137407573744,0,0,0.136203406111576,0,0,0,0.2249738915515,0,0,0,0.0788057072991982,0.157363764404994,0.105600336519406,0.35857467866569,0.191915197319445,0,0,0.25426853765475,0,0,0,1.19730191562487,0,0,0,0.732761168390412,0,0.129282956361551,0,0.171086837884329,0,0.747511887973863,1.25763444079733,0.828478110694391,0,0.197611631897944,0.365377795142688,0,0,0,0,0.327872630709804,0,0,0,0.1251909307065,0,0,0.124192805882767,0,0.124980407962107,0,0,1.6468607378872,0,0,0,0,0,0.189403005275089,0,0,0,0.151230923763239,0,0,0,0,0,0.414706207840855,0,0,0,0,0,0.181848659202559,0,0,0,0,0,0,0,0.192619830407303,0.214441591374926,0,0,0,0,0,0,0,0,0,1.01365464391844,0,0,0.303859956177382,0,0.194860308839388,0,0,0,0,0.211312123358627,0.39997479170986,0.106691729694141,0.172214979660816,0,0.184105950251841,0.279759015438889,0.622077260032973,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0642292250964595,0,0,0,0,0,0,0,0.0981477185010256,0,0.366857197043358,0,0,0,0,0.0752103283492573,0.20170506870352,0.781514011233092,0,0.163771917510097,0.443568258651136,0,0,0,0.0634158101939068,0,1.09651553371436,0,0,0.127762427639595,0,0,0,0.455324382702595,0.0887023701626388,0.115233987555779,0.171488009437418,0,0,0.709163045303809,0.111231401892069,0.470958557103084,0.157115589916002,0,0,0.431855182437243,0,0.142953088353313,0,0,0,0.801711364730253,1.03608082081518,0.17071847709395,0.691259661814092,0.860454717640555,0.354996002191696,0.340853619036631,1.27016115057279,0.22910686854405,0,0,0,0.196300467230486,0,3.88457302312737,5.85177999080608,0,0,0,0,0,0,0,0,0.385870790539723,0.655678681511872,0.470317296361523,0.490296643507811,0,0.392616934229891,0.594092800654172,0,0,0.281951753939561,0.322289439867886,0,0.71421575442263,0,0.320965466756673,0,0.458729283404541,0.143339583151451,0,0.0679914901909147,0,0.5290268405154,0.371995018166751,0.462175628631418,0,0,0,0,0,0,0,0,0.0757786982182394,0,0,0.20686599172379,0.639701945702943,0.23806443146374,0,0,0,0.25458863311266,0.404234377916439,0.217716747896961,0.684466602170562,0.336760265072938,0.717222053926764,0,0.407016343054873,0.106727345877715,0,0.0898252021065869,2.34640942403454,0.122241444182866,0,0,0,0 | |||
|short_description=p4@SQRDL | |||
}} |
Revision as of 23:21, 11 January 2014
Short description: | p4@SQRDL |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_4_at_SQRDL_5end |
Coexpression cluster: | NA |
Association with transcript: | 14bp_to_ENST00000260324_5end |
EntrezGene: | SQRDL |
HGNC: | 20390 |
UniProt: | Q9Y6N5 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
macrophage | 4.94e-14 | 6 |
myeloid leukocyte | 2.16e-09 | 72 |
defensive cell | 6.80e-09 | 48 |
phagocyte | 6.80e-09 | 48 |
neutrophil | 2.49e-08 | 3 |
monopoietic cell | 9.11e-07 | 59 |
monocyte | 9.11e-07 | 59 |
monoblast | 9.11e-07 | 59 |
promonocyte | 9.11e-07 | 59 |
granulocyte | 9.17e-07 | 8 |
Ontology term | p-value | n |
---|---|---|
hindlimb bud | 6.23e-07 | 1 |
soleus muscle | 6.23e-07 | 1 |
appendage | 6.23e-07 | 1 |
lower limb segment | 6.23e-07 | 1 |
multi-limb segment region | 6.23e-07 | 1 |
hindlimb muscle | 6.23e-07 | 1 |
hindlimb zeugopod muscle | 6.23e-07 | 1 |
paired limb/fin | 6.23e-07 | 1 |
limb | 6.23e-07 | 1 |
pelvic appendage | 6.23e-07 | 1 |
limb segment | 6.23e-07 | 1 |
paired limb/fin segment | 6.23e-07 | 1 |
limb muscle | 6.23e-07 | 1 |
pelvic complex muscle | 6.23e-07 | 1 |
zeugopod | 6.23e-07 | 1 |
muscle of leg | 6.23e-07 | 1 |
paired limb/fin bud | 6.23e-07 | 1 |
limb bud | 6.23e-07 | 1 |
pelvic appendage bud | 6.23e-07 | 1 |
limb/fin field | 6.23e-07 | 1 |
subdivision of organism along appendicular axis | 6.23e-07 | 1 |
appendage girdle complex | 6.23e-07 | 1 |
leg | 6.23e-07 | 1 |
hindlimb | 6.23e-07 | 1 |
triceps surae | 6.23e-07 | 1 |
hindlimb zeugopod | 6.23e-07 | 1 |
posterior region of body | 6.23e-07 | 1 |
pelvic complex | 6.23e-07 | 1 |
limb field | 6.23e-07 | 1 |
hindlimb/pelvic fin field | 6.23e-07 | 1 |