FFCP PHASE1:Hg19::chr15:35084643..35084652,-: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
Line 1: | Line 1: | ||
{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=70 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=143 | |||
|TSSclassifier=weak | |||
|UniProt= | |||
|association_with_transcript=70bp_to_ENST00000560563_5end | |||
|coexpression_cluster_id=C352 | |||
|description=CAGE_peak_9_at_ACTC1_5end | |||
|id=chr15:35084643..35084652,- | |||
|ontology_enrichment_celltype=CL:0000188!5.33e-09!9;CL:0000594!2.13e-07!3 | |||
|ontology_enrichment_celltype_v019=CL:0000222;2.25e-16;1!CL:0002262;7.49e-09;2!CL:1000398;7.49e-09;2 | |||
|ontology_enrichment_celltype_v019_2=CL:0002262,6.94e-09,2;CL:1000398,6.94e-09,2 | |||
|ontology_enrichment_development_v019=UBERON:0005062;5.99e-35;4!UBERON:0007284;5.99e-35;4!UBERON:0010226;4.72e-17;1!UBERON:0010227;1.21e-16;1!UBERON:0004140;1.21e-16;1!UBERON:0003104;2.42e-12;31!UBERON:0006603;6.67e-09;65 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0004151!6.81e-17!3;UBERON:0003978!7.97e-17!3;UBERON:0009751!7.97e-17!3;UBERON:0000946!7.97e-17!3;UBERON:0002523!7.97e-17!3;UBERON:0005983!7.97e-17!3;UBERON:0002165!7.97e-17!3;UBERON:0002062!7.97e-17!3;UBERON:0007280!7.97e-17!3;UBERON:0002133!7.75e-12!2;UBERON:0002081!9.57e-12!2;UBERON:0007100!1.68e-11!27;UBERON:0007023!7.49e-08!115;UBERON:0000948!1.63e-07!24;UBERON:0005498!1.63e-07!24;UBERON:0004140!1.63e-07!24;UBERON:0009881!1.63e-07!24;UBERON:0004141!1.63e-07!24;UBERON:0003084!1.63e-07!24;UBERON:0007005!1.63e-07!24;UBERON:0004139!1.63e-07!24;UBERON:0004291!1.63e-07!24;UBERON:0006947!1.63e-07!3;UBERON:0004054!1.63e-07!3;UBERON:0003103!4.78e-07!69;UBERON:0002084!7.49e-07!1;UBERON:0002082!7.49e-07!1;UBERON:0004706!7.49e-07!1;UBERON:0002135!7.90e-07!1;UBERON:0002079!9.81e-07!1 | |||
|ontology_enrichment_uberon_v019=UBERON:0004151;2.24e-46;3!UBERON:0003978;2.62e-46;3!UBERON:0000946;2.62e-46;3!UBERON:0002133;1.60e-31;2!UBERON:0002081;3.46e-31;2!UBERON:0007100;1.30e-29;25!UBERON:0000948;7.09e-25;22!UBERON:0002084;4.72e-17;1!UBERON:0002082;4.72e-17;1!UBERON:0002135;5.53e-17;1!UBERON:0002079;1.21e-16;1!UBERON:0002146;1.21e-16;1!UBERON:0005623;1.21e-16;1!UBERON:0002134;2.25e-16;1!UBERON:0001389;2.25e-16;1!UBERON:0000026;2.25e-16;1!UBERON:0008784;2.25e-16;1!UBERON:0006058;2.25e-16;1!UBERON:0003663;2.25e-16;1!UBERON:0004256;2.25e-16;1!UBERON:0004708;2.25e-16;1!UBERON:0002101;2.25e-16;1!UBERON:0004709;2.25e-16;1!UBERON:0005208;2.25e-16;1!UBERON:0002529;2.25e-16;1!UBERON:0010538;2.25e-16;1!UBERON:0003661;2.25e-16;1!UBERON:0010890;2.25e-16;1!UBERON:0002471;2.25e-16;1!UBERON:0001383;2.25e-16;1!UBERON:0004145;2.25e-16;1!UBERON:0005946;2.25e-16;1!UBERON:0010758;2.25e-16;1!UBERON:0010707;2.25e-16;1!UBERON:0000978;2.25e-16;1!UBERON:0002103;2.25e-16;1!UBERON:0001665;2.25e-16;1!UBERON:0003823;2.25e-16;1!UBERON:0000154;2.25e-16;1!UBERON:0010709;2.25e-16;1!UBERON:0005965;2.25e-16;1!UBERON:0002078;2.25e-16;1!UBERON:0010313;2.03e-14;10!UBERON:0001281;7.49e-09;2!UBERON:0003497;7.49e-09;2!UBERON:0003909;7.49e-09;2!UBERON:0005090;7.49e-09;2!UBERON:0001630;7.49e-09;2!UBERON:0003835;7.49e-09;2!UBERON:0003103;3.51e-07;61 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0004151,1.41e-46,3;UBERON:0003978,2.25e-46,3;UBERON:0009751,2.25e-46,3;UBERON:0000946,2.25e-46,3;UBERON:0002523,2.25e-46,3;UBERON:0005983,2.25e-46,3;UBERON:0002165,2.25e-46,3;UBERON:0002062,2.25e-46,3;UBERON:0007280,2.25e-46,3;UBERON:0002133,1.17e-31,2;UBERON:0002081,2.18e-31,2;UBERON:0010227,2.18e-31,2;UBERON:0007100,1.92e-27,27;UBERON:0000948,7.91e-23,24;UBERON:0005498,7.91e-23,24;UBERON:0004140,7.91e-23,24;UBERON:0009881,7.91e-23,24;UBERON:0004141,7.91e-23,24;UBERON:0003084,7.91e-23,24;UBERON:0007005,7.91e-23,24;UBERON:0004139,7.91e-23,24;UBERON:0004291,7.91e-23,24;UBERON:0004797,2.48e-20,7;UBERON:0002084,4.72e-17,1;UBERON:0002082,4.72e-17,1;UBERON:0010226,4.72e-17,1;UBERON:0002135,5.53e-17,1;UBERON:0002079,1.04e-16,1;UBERON:0002146,1.41e-16,1;UBERON:0005623,1.41e-16,1;UBERON:0002134,1.65e-16,1;UBERON:0005208,1.65e-16,1;UBERON:0005946,1.65e-16,1;UBERON:0005965,1.65e-16,1;UBERON:0002078,1.65e-16,1;UBERON:0005418,2.25e-16,1;UBERON:0001389,2.25e-16,1;UBERON:0000026,2.25e-16,1;UBERON:0008784,2.25e-16,1;UBERON:0006058,2.25e-16,1;UBERON:0003663,2.25e-16,1;UBERON:0004256,2.25e-16,1;UBERON:0004708,2.25e-16,1;UBERON:0002101,2.25e-16,1;UBERON:0004709,2.25e-16,1;UBERON:0002529,2.25e-16,1;UBERON:0010538,2.25e-16,1;UBERON:0003661,2.25e-16,1;UBERON:0010890,2.25e-16,1;UBERON:0002471,2.25e-16,1;UBERON:0001383,2.25e-16,1;UBERON:0004357,2.25e-16,1;UBERON:0004347,2.25e-16,1;UBERON:0005420,2.25e-16,1;UBERON:0005732,2.25e-16,1;UBERON:0010758,2.25e-16,1;UBERON:0010707,2.25e-16,1;UBERON:0000978,2.25e-16,1;UBERON:0002103,2.25e-16,1;UBERON:0001665,2.25e-16,1;UBERON:0003823,2.25e-16,1;UBERON:0000154,2.25e-16,1;UBERON:0010709,2.25e-16,1;UBERON:0005733,2.25e-16,1;UBERON:0005730,2.25e-16,1;UBERON:0010313,1.94e-14,10;UBERON:0002342,1.94e-14,10;UBERON:0005062,1.94e-14,10;UBERON:0003103,1.17e-10,68;UBERON:0001281,6.94e-09,2;UBERON:0003497,6.94e-09,2;UBERON:0003909,6.94e-09,2;UBERON:0003835,6.94e-09,2;UBERON:0005090,7.49e-09,2;UBERON:0001630,7.49e-09,2;UBERON:0004872,1.31e-08,83;UBERON:0001009,3.94e-08,112 | |||
|phase1_expression=0.181678379270557,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.154816123316076,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.605399502633369,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.168776332241266,0.292311015483596,0.252433774244115,0,0,0,0.10075209822764,0,0,0,0,0,0,0,0,0.252320850875628,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.40241773803446,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.723906533337896,0.205476322550383,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.686286847621712,0,0,0,0,0,0,0,0.460385919864187,0,0,1.02341449813341,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.275673144969061,0,0.145016693914229,0.255679882248303,0.712256285173899,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.295930216910801,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.17472666824203,0,0,0,0,0.0969890164884194,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,7.54062483435086,2.29160424011684,1.43574604915363,0,0.858452096273142,4.68660060627932,2.41860500952215,0,0,0,0,0,0,0,0,0,0.160753148465019,0,0,0,0,0,0,0,0,0,0,0,2.85878130549347,9.26928758511604,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,5.60038870528415,0,0,1.26184898228651,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.496211178389294,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.423387050190929,0,0,0,0,0,0,1.29485767437579,0.205325613712494,4.6392577253528,0,0,0,0,0,0,0,0,0,0,0.245148321753905,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.714193294391221,0,0,0,0,0,0,0,0.0673520530145875,0,0,0,0,0,0,0,0,0,0,0,0 | |||
|short_description=p9@ACTC1 | |||
}} |
Revision as of 22:46, 11 January 2014
Short description: | p9@ACTC1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | No |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_9_at_ACTC1_5end |
Coexpression cluster: | C352_heart_mesenchymal_Skeletal_Pericytes_left_skeletal_Myoblast |
Association with transcript: | 70bp_to_ENST00000560563_5end |
EntrezGene: | ACTC1 |
HGNC: | 143 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
endothelial cell of sinusoid | 6.94e-09 | 2 |
endothelial cell of hepatic sinusoid | 6.94e-09 | 2 |