FFCP PHASE1:Hg19::chr14:38064198..38064200,-: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=3169 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=5021 | |||
|TSSclassifier=strong | |||
|UniProt=P55317 | |||
|association_with_transcript=38bp_to_ENST00000250448_5end | |||
|coexpression_cluster_id=C194 | |||
|description=CAGE_peak_11_at_FOXA1_5end | |||
|id=chr14:38064198..38064200,- | |||
|ontology_enrichment_celltype=CL:0000066!5.05e-15!254;CL:0000223!8.07e-13!59;CL:0002076!6.66e-08!43;CL:0002150!4.42e-07!3;CL:0000861!4.42e-07!3 | |||
|ontology_enrichment_celltype_v019=CL:0002327;1.69e-07;4 | |||
|ontology_enrichment_celltype_v019_2=CL:0002327,1.80e-07,4 | |||
|ontology_enrichment_development_v019=UBERON:0008425;5.92e-26;1 | |||
|ontology_enrichment_disease=DOID:305!1.27e-30!106;DOID:0050687!1.46e-23!143;DOID:162!3.81e-16!235;DOID:7!8.16e-16!39;DOID:14566!1.58e-15!239;DOID:5093!6.84e-12!4;DOID:1612!6.84e-12!4;DOID:1749!1.77e-10!14;DOID:299!4.78e-08!25 | |||
|ontology_enrichment_disease_v019=DOID:5093;1.37e-98;4!DOID:1612;1.37e-98;4!DOID:3151;5.92e-26;1!DOID:3149;5.92e-26;1!DOID:3451;1.07e-13;2!DOID:4159;1.07e-13;2!DOID:0060122;1.07e-13;2!DOID:299;1.20e-09;25!DOID:7;3.15e-08;39 | |||
|ontology_enrichment_disease_v019_2=DOID:5093,5.02e-99,4;DOID:1612,5.02e-99,4;DOID:3151,1.26e-25,1;DOID:3149,1.26e-25,1;DOID:3451,1.55e-13,2;DOID:4159,1.55e-13,2;DOID:0060122,1.55e-13,2;DOID:7,1.11e-10,39;DOID:299,1.04e-09,25 | |||
|ontology_enrichment_uberon=UBERON:0004119!7.02e-17!169;UBERON:0000925!7.02e-17!169;UBERON:0006595!7.02e-17!169;UBERON:0001007!4.25e-16!155;UBERON:0001555!4.25e-16!155;UBERON:0007026!4.25e-16!155;UBERON:0004921!1.34e-15!129;UBERON:0004185!1.34e-15!129;UBERON:0005911!4.14e-13!82;UBERON:0000077!1.86e-10!130;UBERON:0003929!3.21e-10!54;UBERON:0007499!4.88e-10!25;UBERON:0001041!8.28e-10!98;UBERON:0009856!1.48e-09!26;UBERON:0000344!1.06e-08!12;UBERON:0009497!4.03e-08!25;UBERON:0000015!4.03e-08!25;UBERON:0002423!4.03e-08!25;UBERON:0006235!4.03e-08!25;UBERON:0004161!4.03e-08!25;UBERON:0008835!9.82e-08!22;UBERON:0003894!9.82e-08!22;UBERON:0009854!2.55e-07!23 | |||
|ontology_enrichment_uberon_v019=UBERON:0000310;6.41e-40;10!UBERON:0001443;2.35e-36;11!UBERON:0000915;2.69e-08;52!UBERON:0000014;1.69e-07;4!UBERON:0001911;1.69e-07;4 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000310,4.30e-40,10;UBERON:0001443,1.63e-36,11;UBERON:0000915,4.14e-08,52;UBERON:0001911,1.80e-07,4;UBERON:0005333,1.80e-07,4;UBERON:0008425,1.80e-07,4;UBERON:0005311,1.80e-07,4;UBERON:0000014,2.04e-07,4 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0.491467873003018,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.32171328579026,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.118306800039844,0,0,0.110293972732394,0,0,0.134831308160164,0,0,0,0,0,0,1.26755034821831,0,0,0,0.122988438543114,0,0,0,0,0,0,0,0,0,0,0,0,0,3.95102198979638,1.71697232418975,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.12269149171914,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.40101294060657,0.276242966807689,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.515205058238611,0,0,0,0,0,0,0,0,0,0,0,0,0,0.330569830721956,0.192190067365106,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.78494864019923,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0941438007767792,0,0,0,0.229723400206959,0,0,0,0,0,0,0,0,0,0,0.735120647943095,0,0,0,0,0,0,0,0,0,0,0,0,0,0.321176150207399,0.201799707191048,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.111308705022906,0,0,0,0,0,0,0,0,0.0898683511473268,0.716084698702437,0,0,0,0,0,0,0,1.5625665665114,1.22443999994674,0,0.682760689712998,0.254253650292766,0,0,0,0,0,0,0,0,0,0,0,0.278847488557207,0.0769502585037971,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.22206028986725,0,0,0,0,0,0,0,0.19566461893209,0,0,0,0,0,0.150323419414493,0.103688191397247,0,0,0,0,0,0,0,0.293977192243133,0,0,0,0.19351266257817,0.0730893170861856,0.0821154570532092,0.193978032976839,0,0.225980740780532,0,0,0,0.195551382734803,0,0,0,0,0,0.171594997861965,0,0.248505071130865,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.157566364614447,0.329663433524666,0.337017719270924,0.295282444544246,0,0,0,0,0,0,0,0,0,1.0063040627978,0,0,0.105600336519406,0,0,0,0,0,0,0,0,0,0,0,0,0.439656701034247,0,0,0,0,0,0.106787412567695,0,0,0,0,0,0,0,0,0,0,0.157054096250234,0,0,0,0,0,0,0.138348634936231,0,0.151649117541648,0,0.470531639396343,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.214441591374926,0.260994291965212,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.132864840313363,0,0,0.245772908753719,0,0,0.106691729694141,0,0.567515953566836,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.6124909547064,0,0,0,0,0,0,0,0,0.294443155503077,0.11796972334774,0,0.231051332300676,0,0,0,0,0,0,0,0.163771917510097,0.295712172434091,0,0,0,0,0,0,0,0,0.127762427639595,0,0,0,0,0,0,0,0,0,0,0.111231401892069,0.39246546425257,0,0,0,0,0,0,0,0,0,0,0,0,0,0.430227358820278,0,0,0,0.22910686854405,0,0,0,0.294450700845729,0.121917924982269,0,0,0,0,0,0,0,0,0,0.452888530700021,0.385870790539723,0.218559560503957,0,0,0.235676547101626,0,0,0,0,0,0,0,0.535661815816973,0,0.320965466756673,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.426467963801962,0,0,0,0,0,0,0,0,0.134704106029175,0.358611026963382,0,0.0814032686109745,0,0,0.0898252021065869,0,0,0,0,0,0 | |||
|short_description=p11@FOXA1 | |||
}} |
Revision as of 19:50, 11 January 2014
Short description: | p11@FOXA1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_11_at_FOXA1_5end |
Coexpression cluster: | C194_MCF7_breast_prostate_Intestinal_diffuse_Wilms_Alveolar |
Association with transcript: | 38bp_to_ENST00000250448_5end |
EntrezGene: | FOXA1 |
HGNC: | 5021 |
UniProt: | P55317 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
mammary gland epithelial cell | 1.80e-07 | 4 |
Ontology term | p-value | n |
---|---|---|
breast | 4.30e-40 | 10 |
chest | 1.63e-36 | 11 |
thoracic segment of trunk | 4.14e-08 | 52 |
mammary gland | 1.80e-07 | 4 |
mammary bud | 1.80e-07 | 4 |
mammary ridge | 1.80e-07 | 4 |
mammary placode | 1.80e-07 | 4 |
zone of skin | 2.04e-07 | 4 |
Ontology term | p-value | n |
---|---|---|
thoracic cancer | 5.02e-99 | 4 |
breast cancer | 5.02e-99 | 4 |
skin squamous cell carcinoma | 1.26e-25 | 1 |
keratoacanthoma | 1.26e-25 | 1 |
skin carcinoma | 1.55e-13 | 2 |
skin cancer | 1.55e-13 | 2 |
integumentary system cancer | 1.55e-13 | 2 |
disease of anatomical entity | 1.11e-10 | 39 |
adenocarcinoma | 1.04e-09 | 25 |