FFCP PHASE1:Hg19::chr13:76378305..76378354,+: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
Line 1: | Line 1: | ||
{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=4008 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=6646 | |||
|TSSclassifier=strong | |||
|UniProt=E9PRJ0,E9PRE3 | |||
|association_with_transcript=0bp_to_ENST00000526371,ENST00000526528_5end | |||
|coexpression_cluster_id=C56 | |||
|description=CAGE_peak_4_at_LMO7_5end | |||
|id=chr13:76378305..76378354,+ | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019=UBERON:0006601;5.34e-10;82!UBERON:0005062;1.94e-08;4!UBERON:0007284;1.94e-08;4!UBERON:0003104;8.24e-08;31!UBERON:0010122;2.85e-07;2!UBERON:0006965;4.77e-07;2 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019=DOID:114;6.04e-08;2 | |||
|ontology_enrichment_disease_v019_2=DOID:114,5.85e-08,2 | |||
|ontology_enrichment_uberon=UBERON:0007023!1.02e-59!115;UBERON:0001869!2.76e-41!32;UBERON:0001893!5.21e-41!34;UBERON:0002780!9.19e-40!41;UBERON:0001890!9.19e-40!41;UBERON:0006240!9.19e-40!41;UBERON:0002791!2.59e-39!33;UBERON:0003080!1.42e-38!42;UBERON:0002619!2.21e-35!22;UBERON:0002020!2.42e-35!34;UBERON:0003528!2.42e-35!34;UBERON:0001950!1.47e-32!20;UBERON:0001049!6.00e-31!57;UBERON:0005068!6.00e-31!57;UBERON:0006241!6.00e-31!57;UBERON:0007135!6.00e-31!57;UBERON:0001017!1.09e-30!82;UBERON:0000956!2.03e-30!25;UBERON:0000203!2.03e-30!25;UBERON:0002616!1.61e-29!59;UBERON:0005743!1.22e-28!86;UBERON:0000955!2.38e-28!69;UBERON:0006238!2.38e-28!69;UBERON:0003075!5.00e-25!86;UBERON:0007284!5.00e-25!86;UBERON:0000073!1.15e-24!94;UBERON:0001016!1.15e-24!94;UBERON:0003056!2.35e-23!61;UBERON:0002346!2.42e-23!90;UBERON:0000025!6.41e-21!194;UBERON:0004111!1.31e-17!241;UBERON:0004121!1.68e-15!169;UBERON:0000924!8.40e-15!173;UBERON:0006601!8.40e-15!173;UBERON:0000153!9.58e-15!129;UBERON:0007811!9.58e-15!129;UBERON:0000033!2.71e-14!123;UBERON:0000477!1.53e-12!286;UBERON:0002420!4.63e-12!9;UBERON:0007245!4.63e-12!9;UBERON:0010009!4.63e-12!9;UBERON:0010011!4.63e-12!9;UBERON:0000454!4.63e-12!9;UBERON:0000200!1.88e-11!6;UBERON:0000483!2.14e-11!309;UBERON:0000119!4.16e-11!312;UBERON:0001871!5.55e-11!7;UBERON:0000481!1.89e-10!347;UBERON:0007100!1.92e-10!27;UBERON:0001872!4.07e-10!5;UBERON:0002021!5.15e-10!5;UBERON:0000349!4.64e-09!5;UBERON:0009663!4.70e-09!7;UBERON:0000468!4.81e-09!659;UBERON:0000467!6.99e-09!625;UBERON:0000480!8.01e-09!626;UBERON:0000369!5.88e-08!4;UBERON:0002435!5.88e-08!4;UBERON:0000204!5.88e-08!4;UBERON:0010082!5.88e-08!4;UBERON:0000475!8.06e-08!365;UBERON:0000064!9.85e-08!219;UBERON:0000062!2.74e-07!511;UBERON:0000922!4.24e-07!612;UBERON:0000923!4.44e-07!604;UBERON:0005291!4.44e-07!604;UBERON:0006598!4.44e-07!604;UBERON:0002532!4.44e-07!604;UBERON:0003978!4.92e-07!3;UBERON:0009751!4.92e-07!3;UBERON:0000946!4.92e-07!3;UBERON:0002523!4.92e-07!3;UBERON:0005983!4.92e-07!3;UBERON:0002165!4.92e-07!3;UBERON:0002062!4.92e-07!3;UBERON:0007280!4.92e-07!3;UBERON:0004151!5.02e-07!3;UBERON:0002050!5.02e-07!605;UBERON:0005423!5.02e-07!605;UBERON:0000948!5.48e-07!24;UBERON:0005498!5.48e-07!24;UBERON:0004140!5.48e-07!24;UBERON:0009881!5.48e-07!24;UBERON:0004141!5.48e-07!24;UBERON:0003084!5.48e-07!24;UBERON:0007005!5.48e-07!24;UBERON:0004139!5.48e-07!24;UBERON:0004291!5.48e-07!24;UBERON:0002308!7.97e-07!9;UBERON:0000125!7.97e-07!9 | |||
|ontology_enrichment_uberon_v019=UBERON:0001869;1.73e-56;32!UBERON:0001950;1.89e-56;20!UBERON:0002619;3.72e-56;22!UBERON:0002791;1.64e-52;32!UBERON:0001893;2.57e-51;34!UBERON:0000956;5.35e-49;25!UBERON:0000203;5.35e-49;25!UBERON:0003528;2.18e-48;34!UBERON:0002020;2.18e-48;34!UBERON:0002780;9.42e-37;41!UBERON:0001890;9.42e-37;41!UBERON:0000073;6.33e-23;53!UBERON:0002616;6.33e-23;53!UBERON:0000955;3.42e-20;68!UBERON:0000200;6.78e-19;6!UBERON:0001017;2.41e-17;75!UBERON:0001872;1.38e-16;5!UBERON:0002021;2.30e-16;5!UBERON:0002420;6.88e-16;9!UBERON:0007245;6.88e-16;9!UBERON:0010009;6.88e-16;9!UBERON:0010011;6.88e-16;9!UBERON:0000454;6.88e-16;9!UBERON:0001871;1.25e-15;6!UBERON:0007023;4.70e-15;114!UBERON:0007100;5.21e-14;25!UBERON:0000369;9.34e-13;4!UBERON:0002435;9.34e-13;4!UBERON:0000204;9.34e-13;4!UBERON:0001016;1.09e-11;83!UBERON:0003978;3.85e-11;3!UBERON:0000946;3.85e-11;3!UBERON:0004151;3.98e-11;3!UBERON:0009663;6.97e-11;7!UBERON:0001870;2.63e-10;3!UBERON:0005383;5.64e-10;3!UBERON:0005382;5.64e-10;3!UBERON:0000349;7.23e-10;5!UBERON:0000948;2.13e-08;22!UBERON:0000125;2.18e-08;9!UBERON:0002308;2.18e-08;9!UBERON:0002081;6.35e-08;2!UBERON:0002133;6.57e-08;2!UBERON:0002771;1.92e-07;2!UBERON:0002702;2.21e-07;2!UBERON:0001873;2.85e-07;2!UBERON:0001876;4.70e-07;2 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001869,1.90e-63,32;UBERON:0001893,2.18e-59,34;UBERON:0002791,1.92e-58,32;UBERON:0001950,2.20e-56,20;UBERON:0002619,3.48e-56,22;UBERON:0003528,1.10e-54,34;UBERON:0002020,1.10e-54,34;UBERON:0007023,2.23e-52,114;UBERON:0002780,6.05e-52,41;UBERON:0001890,6.05e-52,41;UBERON:0003080,6.05e-52,41;UBERON:0006240,6.05e-52,41;UBERON:0000956,5.05e-49,25;UBERON:0000203,5.05e-49,25;UBERON:0000073,1.19e-41,53;UBERON:0002616,1.19e-41,53;UBERON:0001049,4.88e-39,56;UBERON:0005068,4.88e-39,56;UBERON:0006241,4.88e-39,56;UBERON:0007135,4.88e-39,56;UBERON:0000955,6.43e-38,68;UBERON:0006238,6.43e-38,68;UBERON:0001017,7.82e-33,81;UBERON:0003056,1.09e-32,61;UBERON:0003075,5.99e-31,82;UBERON:0007284,5.99e-31,82;UBERON:0002346,3.96e-29,86;UBERON:0001016,9.37e-29,89;UBERON:0010314,5.92e-25,132;UBERON:0010371,1.15e-22,104;UBERON:0000025,8.29e-22,192;UBERON:0000200,7.23e-19,6;UBERON:0001872,1.58e-16,5;UBERON:0002021,2.38e-16,5;UBERON:0004111,3.16e-16,240;UBERON:0002420,6.73e-16,9;UBERON:0007245,6.73e-16,9;UBERON:0010009,6.73e-16,9;UBERON:0010011,6.73e-16,9;UBERON:0000454,6.73e-16,9;UBERON:0001871,1.34e-15,6;UBERON:0004121,2.05e-14,171;UBERON:0000924,2.05e-14,171;UBERON:0006601,2.05e-14,171;UBERON:0007100,8.69e-13,27;UBERON:0000369,9.35e-13,4;UBERON:0002435,9.35e-13,4;UBERON:0000204,9.35e-13,4;UBERON:0010082,9.35e-13,4;UBERON:0000483,6.31e-12,306;UBERON:0000119,1.06e-11,309;UBERON:0003978,3.79e-11,3;UBERON:0009751,3.79e-11,3;UBERON:0000946,3.79e-11,3;UBERON:0002523,3.79e-11,3;UBERON:0005983,3.79e-11,3;UBERON:0002165,3.79e-11,3;UBERON:0002062,3.79e-11,3;UBERON:0007280,3.79e-11,3;UBERON:0004151,3.92e-11,3;UBERON:0011216,4.08e-11,223;UBERON:0009663,6.98e-11,7;UBERON:0001870,2.63e-10,3;UBERON:0005383,5.23e-10,3;UBERON:0005382,5.23e-10,3;UBERON:0000349,6.27e-10,5;UBERON:0000125,2.18e-08,9;UBERON:0002308,2.18e-08,9;UBERON:0003103,3.99e-08,68;UBERON:0002081,6.25e-08,2;UBERON:0010227,6.25e-08,2;UBERON:0002133,6.46e-08,2;UBERON:0000948,1.41e-07,24;UBERON:0005498,1.41e-07,24;UBERON:0004140,1.41e-07,24;UBERON:0009881,1.41e-07,24;UBERON:0004141,1.41e-07,24;UBERON:0003084,1.41e-07,24;UBERON:0007005,1.41e-07,24;UBERON:0004139,1.41e-07,24;UBERON:0004291,1.41e-07,24;UBERON:0002771,1.95e-07,2;UBERON:0002702,2.29e-07,2;UBERON:0001873,2.60e-07,2;UBERON:0010122,2.60e-07,2;UBERON:0001876,4.56e-07,2 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.43806866313962,0,0,0,0,0,0,0,0,0,0,2.03017567021455,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.132409180813219,0,0,1.12135520028461,0,0,0.622422070799533,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.113432183160021,0,0,0,0,0,0.257640540045629,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.590789906681404,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.063497894292169,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.285955987316295,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.335032530668698,0.637938751653163,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.128139149255701,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.618246069886334,0,0,0,0,0,0,0.154048617114644,0,0.137836572484531,0,0,0,0,0,0,0,0,0,0,0,0.924100740528266,0,0,0,0.286249773483982,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.243713489631284,0,0,0,0,0,0.66343897524122,0,0,0,1.01455188481352,0.30982349809975,0,0,0,1.07001315444375,0,0,0,0,0,0,0,0,0.659006605437454,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.293016358543788,0,0,0,0.23874448473769,0.296964680832639,0.307160702099232,3.97659059106519,3.23539657744179,0,0,0,7.57142355354065,0.552567831062295,0,0,0,0,0,0,0,1.38100767891707,0,0,3.87733098438087,7.2359116566244,7.98455192004777,0,0,0,0,0,0,0,0,0,8.85741385813839,2.41192877250816,0,0.110579259931225,0,3.94893714877151,0,0,0.230850775511391,0,0,0,0,1.5950057986596,0.0915975934018623,0,0,0.156980256395025,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.404406797884062,0,1.40558667435203,0,0,0,0.394584402849391,0,6.42752799424029,0.379119477770928,0,0,0,0,0,0,0,0,0,0,0,1.04836000945218,0,0,0,0,0,0,0,0,0,7.97716029044072,0,0,1.06726497369676,0,0,0,0,0,0,0,0,0,0,0,2.40168115483916,0.684526894459965,0,0,0,53.6222210442728,85.9351590043814,10.7680953686522,14.9759250374243,39.9180224767011,69.8526661793061,164.733874537453,0,0,0,0,0.0674035438541849,0,0,0.795229689809303,1.90684768556206,0.160753148465019,0,0.415440338029185,0,0,5.77120788251234,0,2.04894838977915,1.04909176269996,0.105600336519406,0,0,60.7491027417362,64.2229211254469,0,0,0,0,0,0,0,0,1.02586563574658,0,0,0,0,0,0.106787412567695,1.25763444079733,0,0,0,0,0,0,0,0,0,0,6.2024772597689,8.78589107294135,6.50992839673799,0,0,1.92498849118289,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.302461847526478,0,0,0,0,0,0,0,0.521745061811734,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,5.53033744606923,0,0,0,0,0,0,0,0,0,0.567515953566836,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,5.13833800771676,22.6714522120936,8.14132681191471,5.74325819874114,10.3349395450904,4.84100767249525,5.65164759711479,0,0,0,0,0,0,0,0,0.601682626794058,0,0,0,0,0,8.8474235850097,9.37293718336617,12.401207790071,7.22940236210538,14.7683198434919,0,0.496211178389294,0,0,0,0,0,0,0.354809480650555,0,0,0.203909198930495,5.52491297927932,0,0,0.156986185701028,3.29942738823604,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.846774100381858,0,0,0,0,0.098150233615243,0,8.41657488344263,1.7452677165562,1.1598144313382,0.971421986118279,0,0,0,0,0,0,0.0771741581079447,0.218559560503957,0,0.245148321753905,0,0,0,0,0,0,0,0,0,0,0,0.730336388246517,0,0,0,3.19560003897299,9.5997151874883,0,0,0,0,0,0,0,0,0,0,0,6.51696804676859,1.60778478093707,0.829169439458779,0.620597975171371,0.213233981900981,0.714193294391221,0,0,0,0,0,0.435433495793923,0.342233301085281,0,0,1.33064142618405,0,0,0,0,14.0784565442073,0,0,0,1.20764276154616,0 | |||
|short_description=p4@LMO7 | |||
}} |
Revision as of 18:05, 11 January 2014
Short description: | p4@LMO7 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_4_at_LMO7_5end |
Coexpression cluster: | C56_heart_left_umbilical_skeletal_penis_diaphragm_tongue |
Association with transcript: | 0bp_to_ENST00000526371, ENST00000526528_5end |
EntrezGene: | LMO7 |
HGNC: | 6646 |
UniProt: | E9PRJ0E9PRE3 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
heart disease | 5.85e-08 | 2 |