FFCP PHASE1:Hg19::chr13:76335059..76335079,+: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=4008 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=6646 | |||
|TSSclassifier=not | |||
|UniProt=E9PLH4,Q8WWI1 | |||
|association_with_transcript=262bp_to_ENST00000465261,NM_015842,uc001vjv.2_5end | |||
|coexpression_cluster_id=C25 | |||
|description=CAGE_peak_24_at_LMO7_5end | |||
|id=chr13:76335059..76335079,+ | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019=CL:0000182;2.11e-10;12 | |||
|ontology_enrichment_celltype_v019_2=CL:0000182,2.18e-10,12 | |||
|ontology_enrichment_development_v019=UBERON:0001045;2.11e-14;1!UBERON:0004161;2.70e-11;11!UBERON:0009497;1.20e-09;13!UBERON:0003104;5.46e-07;31 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001869!1.88e-11!32;UBERON:0001893!2.06e-11!34;UBERON:0001007!5.20e-11!155;UBERON:0001555!5.20e-11!155;UBERON:0007026!5.20e-11!155;UBERON:0002791!6.35e-11!33;UBERON:0002619!9.82e-11!22;UBERON:0004119!2.08e-10!169;UBERON:0000925!2.08e-10!169;UBERON:0006595!2.08e-10!169;UBERON:0000956!4.44e-10!25;UBERON:0000203!4.44e-10!25;UBERON:0002020!1.69e-09!34;UBERON:0003528!1.69e-09!34;UBERON:0002780!2.03e-09!41;UBERON:0001890!2.03e-09!41;UBERON:0006240!2.03e-09!41;UBERON:0001950!4.23e-09!20;UBERON:0003080!4.80e-09!42;UBERON:0004921!5.35e-09!129;UBERON:0004185!5.35e-09!129;UBERON:0000481!1.49e-07!347;UBERON:0001046!2.64e-07!19 | |||
|ontology_enrichment_uberon_v019=UBERON:0000160;5.71e-59;17!UBERON:0005409;5.31e-46;22!UBERON:0000059;4.06e-30;11!UBERON:0004921;1.85e-27;33!UBERON:0002108;4.73e-25;4!UBERON:0004907;3.01e-24;5!UBERON:0001154;2.11e-14;1!UBERON:0001153;2.11e-14;1!UBERON:0009854;2.11e-14;1!UBERON:0001052;3.49e-14;4!UBERON:0001155;5.52e-14;9!UBERON:0001007;3.25e-13;81!UBERON:0001555;7.45e-11;54!UBERON:0002107;9.17e-07;19!UBERON:0006925;9.17e-07;19 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000160,4.08e-59,17;UBERON:0005409,1.04e-40,25;UBERON:0000059,3.00e-30,11;UBERON:0002108,4.93e-25,4;UBERON:0004907,2.10e-24,5;UBERON:0004921,1.86e-17,118;UBERON:0001154,1.61e-14,1;UBERON:0001153,1.61e-14,1;UBERON:0001045,1.61e-14,1;UBERON:0001052,2.95e-14,4;UBERON:0001155,4.95e-14,9;UBERON:0001007,5.87e-14,145;UBERON:0001555,5.87e-14,145;UBERON:0007026,5.87e-14,145;UBERON:0004119,1.62e-12,160;UBERON:0000925,1.62e-12,160;UBERON:0006595,1.62e-12,160;UBERON:0001046,1.91e-11,19;UBERON:0011216,6.07e-10,223;UBERON:0009854,2.26e-09,23;UBERON:0009856,2.57e-08,26;UBERON:0002107,9.35e-07,19;UBERON:0006925,9.35e-07,19;UBERON:0008836,9.35e-07,19 | |||
|phase1_expression=0.54503513781167,0,0.140954404095971,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.125542639594803,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.217010870715852,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.267540828089713,0,0,0,0,0,0,0,0,0.150575119077773,0,0,0,0,0,0,0,0,0,0,0,0,0.144846518960824,0,0,0,0.221729397462564,0,0.0654895377488563,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.12663051166458,0,0.573673241497627,0.354668382198357,0,0,0.24666754841716,0,0,0,0,0.576175924479999,0,0,0,0,0,0,0,0.204154171254893,0.122834317311768,0,0,0.247266929278557,0,0,0,0,0,0,0.30648779579902,0,0.113432183160021,0.179389635688862,0,0.211931901159562,0.300091096084402,0,0,0,0.168776332241266,0,0,0.0920498986422993,0,0,0.10075209822764,0,0,0,0.286804595389004,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.217879444092406,0,0,0.196221465125346,0,0,0,0,0,0,0,0,0,3.93563003337963,0,0,0,0,0.0925884451585296,0,0,0,0,0.117408694235822,0,0,0,0,0,0,0,0,0,0,0,0,0.290633938513962,0,0,0,0,0,0,0,0,0,0,0,0,0.285826432630578,0,0,0,0,0,0,0,0,0,0,0,0.142977993658148,0,0,0,0,0,0,0,0,0,0,0,0.239624855491583,0,0,0.144781306667579,0.205476322550383,0.179060963239896,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.178428988797162,0.788512075169673,0.117141414992713,0.300946099727719,0,1.03473071292505,0,0.184369168541703,0.173767228936166,0,0,0,0,0,0,0,0,0.496215615637554,0.767309866440312,0,0.128139149255701,0,0.321707842287215,0,0,0.177561725313127,0,0,0,2.1754700926492,0,0.184161977871793,0.68888668898764,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.145016693914229,0,0.0890320356467374,0,0.192190067365106,0.127612712494584,0.2023155617111,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.136499911407986,0,0,0,0,0,0,0,0,0.30982349809975,0,0,0.0982490410131212,0,0.354761064070598,0.211107635297664,0,0,0,0,0.670302275535787,0,0.0941438007767792,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.935702702041099,0,0,0,0,0.71623345421307,0.296964680832639,0,0,0.422008249231538,0,0,0,0,1.65770349318689,0.251932747854276,0,0,0.311039587661807,0.0898683511473268,0,0,0.295930216910801,0,0,0,0,0,0,0,0,0,0.254253650292766,0,0,0,0,0,0.241192877250816,0,0,0,0.87754158861589,0,0.278847488557207,0,0,0,0,0,0.31900115973192,0,0,0,0,0,0,0,0,0,0,0,0,0.848118428603645,0,0.995261931078505,7.69580811179051,8.55442202907076,0,0,0,0.067401132980677,0,0,0,0,0,0,0,0.30607276163049,0,0,0,0,0,0,0,0,0,0,0.0979923974143777,0,0.17472666824203,0,0.0967563312890851,0.0730893170861856,0.0821154570532092,0.0969890164884194,0,0,0,0,0.189932387867636,0.391102765469606,0.0801588202515337,0,0,0.864542502924636,0,0,0.288109595976299,0,0.471388069233591,0.135904206073614,0,0.101998217636322,0,0,0,0,0,0,0,0,0,0.199679000498991,0,0,0.0671834724867263,0,0,1.18174773460835,1.07140615895516,1.55028150864625,0,0,0.795229689809303,0.136203406111576,0,0,0,0,0,0.0607495566580247,0,0.0788057072991982,0.157363764404994,0,0,0.191915197319445,0,0,0,0,0,0,0,0,0.170388021785422,0,0.146552233678082,0,0,0,0.171086837884329,0,0.213574825135389,0.157204305099666,0,0,0,0,0,0,0,0,0,0,0,0.732157589411779,0.3755727921195,0,0,0.0620964029413835,0,0,0,0,0.470531639396343,0,0,0,0,0,0.189403005275089,0,0,0,0,0,0,0,0,0,0,0.53168342911599,0,0,0,0,0,0,0,0,0,0,0.336749488765919,0,0,0,0,0,0,0,0.179088841081487,0.308801447160972,0.219284049578707,0.176689145945881,0,0,0,0,0,0.138258436151731,0,0,0.163565394255844,0,0.245772908753719,0.422624246717254,0,0,0,0,0,0,0,0,0,0,0,0,0.212574920101683,0,0,0,0,0.80057074828547,0,0,0.321146125482298,0,0.159633859057151,0,0.756215088665154,0.0691572524642179,0.322951291263702,0,0,0,0,0,0.762764190934334,0,0,0.0752103283492573,0,0,0,0,0,0.0675375846183947,0,0.206686796501184,0.126831620387814,1.09394961803644,0,0,0,0.127762427639595,0,0,0,0,0,0,0,0,0.197318320688547,0.118193840883968,0.222462803784138,0.078493092850514,0.785577949580009,3.08299379645168,1.82631744101899,0,0,0,0,0,0.173858272302579,0,0,0,0,0,0,0,0,0.22910686854405,0,0,0.111855431797792,0.098150233615243,0.243835849964539,0,0.102662806856247,0,0,0,0.397901550322736,0,0,0,0,20.2968035823894,7.43102505713455,0,0,0,0,0,0,0.679708458751268,0,0,0,0,0,0.0802413666891683,0.730336388246517,0.458729283404541,0,0.157771562193185,0.135982980381829,0,10.580536810308,0.371995018166751,0,0,0,0,0,0,0,0.0918948995348449,0,0,0,0,0.20686599172379,0.426467963801962,0,0,0.124149428591716,0.112131862580613,0.190941474834495,0.202117188958219,0.217716747896961,0,0.0673520530145875,0.215166616178029,0.665320713092027,0,0,0,0.988077223172456,0,0,0,0,0,0.320568492303233 | |||
|short_description=p24@LMO7 | |||
}} |
Revision as of 18:05, 11 January 2014
Short description: | p24@LMO7 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | No |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_24_at_LMO7_5end |
Coexpression cluster: | C25_small_colon_temporal_duodenum_liver_Hepatocyte_gall |
Association with transcript: | 262bp_to_ENST00000465261, NM_015842, uc001vjv.2_5end |
EntrezGene: | LMO7 |
HGNC: | 6646 |
UniProt: | E9PLH4Q8WWI1 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
hepatocyte | 2.18e-10 | 12 |
Ontology term | p-value | n |
---|---|---|
intestine | 4.08e-59 | 17 |
gastrointestinal system | 1.04e-40 | 25 |
large intestine | 3.00e-30 | 11 |
small intestine | 4.93e-25 | 4 |
lower digestive tract | 2.10e-24 | 5 |
subdivision of digestive tract | 1.86e-17 | 118 |
vermiform appendix | 1.61e-14 | 1 |
caecum | 1.61e-14 | 1 |
midgut | 1.61e-14 | 1 |
rectum | 2.95e-14 | 4 |
colon | 4.95e-14 | 9 |
digestive system | 5.87e-14 | 145 |
digestive tract | 5.87e-14 | 145 |
primitive gut | 5.87e-14 | 145 |
endoderm-derived structure | 1.62e-12 | 160 |
endoderm | 1.62e-12 | 160 |
presumptive endoderm | 1.62e-12 | 160 |
hindgut | 1.91e-11 | 19 |
organ system subdivision | 6.07e-10 | 223 |
digestive tract diverticulum | 2.26e-09 | 23 |
sac | 2.57e-08 | 26 |
liver | 9.35e-07 | 19 |
digestive gland | 9.35e-07 | 19 |
liver bud | 9.35e-07 | 19 |