FFCP PHASE1:Hg19::chr13:114567034..114567074,-: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=2621 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=4168 | |||
|TSSclassifier=strong | |||
|UniProt=Q14393 | |||
|association_with_transcript=0bp_to_ENST00000327773,ENST00000357389,NM_000820,uc001vud.2_5end | |||
|description=CAGE_peak_2_at_GAS6_5end | |||
|id=chr13:114567034..114567074,- | |||
|ontology_enrichment_celltype=CL:0000055!4.04e-24!180;CL:0000222!1.42e-16!119;CL:0000057!3.55e-15!75;CL:0000192!2.00e-13!42;CL:0000514!2.00e-13!42;CL:0000680!2.10e-13!57;CL:0000056!2.10e-13!57;CL:0000355!2.10e-13!57;CL:0000183!2.87e-13!59;CL:0000220!1.34e-12!246;CL:0000187!1.72e-12!54;CL:0002321!3.02e-12!248;CL:0000359!6.82e-11!32;CL:0000393!3.35e-10!60;CL:0000211!3.35e-10!60;CL:0002620!5.02e-08!23 | |||
|ontology_enrichment_celltype_v019=CL:0000359;2.84e-10;32!CL:0000192;4.76e-10;43!CL:0002620;4.75e-08;23!CL:0000187;2.32e-07;55!CL:0000057;9.16e-07;73 | |||
|ontology_enrichment_celltype_v019_2=CL:0000222,1.39e-16,121;CL:0000057,1.01e-15,76;CL:0000192,1.14e-13,43;CL:0000514,1.14e-13,43;CL:0000680,1.17e-13,58;CL:0000056,1.17e-13,58;CL:0000355,1.17e-13,58;CL:0000187,9.71e-13,55;CL:0002321,2.22e-12,250;CL:0000359,6.42e-11,32;CL:0000393,1.95e-10,61;CL:0000211,1.95e-10,61;CL:0002620,4.82e-08,23 | |||
|ontology_enrichment_development_v019=CL:0000514;4.76e-10;43!CL:0000355;1.39e-07;58 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000475!6.87e-24!365;UBERON:0000468!1.73e-21!659;UBERON:0005256!1.28e-19!143;UBERON:0000480!1.32e-19!626;UBERON:0000467!3.83e-19!625;UBERON:0000914!7.71e-18!83;UBERON:0002329!7.71e-18!83;UBERON:0003077!7.71e-18!83;UBERON:0003059!7.71e-18!83;UBERON:0007282!7.71e-18!83;UBERON:0009618!7.71e-18!83;UBERON:0007285!7.71e-18!83;UBERON:0000486!6.14e-17!82;UBERON:0000483!6.58e-17!309;UBERON:0002100!9.73e-17!216;UBERON:0000119!2.58e-16!312;UBERON:0004290!1.59e-15!70;UBERON:0000481!1.56e-14!347;UBERON:0004111!5.93e-14!241;UBERON:0003102!8.91e-14!95;UBERON:0002385!1.99e-13!63;UBERON:0001015!1.99e-13!63;UBERON:0000383!1.99e-13!63;UBERON:0001134!2.58e-13!61;UBERON:0002036!2.58e-13!61;UBERON:0003082!2.58e-13!61;UBERON:0000055!2.41e-12!69;UBERON:0002050!2.69e-12!605;UBERON:0005423!2.69e-12!605;UBERON:0000477!2.82e-12!286;UBERON:0001981!5.47e-12!60;UBERON:0007500!5.47e-12!60;UBERON:0004537!5.47e-12!60;UBERON:0006965!5.47e-12!60;UBERON:0000923!5.50e-12!604;UBERON:0005291!5.50e-12!604;UBERON:0006598!5.50e-12!604;UBERON:0002532!5.50e-12!604;UBERON:0000922!5.76e-12!612;UBERON:0003914!9.38e-12!118;UBERON:0004872!4.00e-11!84;UBERON:0003104!4.52e-11!238;UBERON:0009142!4.52e-11!238;UBERON:0002049!8.07e-11!79;UBERON:0007798!8.07e-11!79;UBERON:0001637!8.66e-11!42;UBERON:0003509!8.66e-11!42;UBERON:0004572!8.66e-11!42;UBERON:0000490!5.42e-10!138;UBERON:0002199!8.91e-10!45;UBERON:0002416!8.91e-10!45;UBERON:0000025!1.10e-09!194;UBERON:0004573!1.34e-09!33;UBERON:0004571!1.34e-09!33;UBERON:0000062!1.75e-08!511;UBERON:0000926!1.92e-08!448;UBERON:0004120!1.92e-08!448;UBERON:0006603!1.92e-08!448;UBERON:0002097!2.49e-08!40;UBERON:0000064!5.20e-08!219 | |||
|ontology_enrichment_uberon_v019=UBERON:0004573;9.11e-09;33!UBERON:0004571;9.11e-09;33!UBERON:0001637;7.86e-08;42!UBERON:0003509;7.86e-08;42!UBERON:0004572;7.86e-08;42!UBERON:0002199;1.80e-07;46!UBERON:0002416;1.80e-07;46!UBERON:0002097;4.60e-07;41!UBERON:0002385;4.96e-07;31!UBERON:0001015;4.96e-07;31!UBERON:0000383;4.96e-07;31!UBERON:0003102;5.34e-07;50 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0007503,2.17e-17,78;UBERON:0000483,2.23e-17,306;UBERON:0000486,3.28e-17,83;UBERON:0000119,9.01e-17,309;UBERON:0003104,3.40e-16,160;UBERON:0009142,3.40e-16,160;UBERON:0007524,8.48e-16,73;UBERON:0002329,8.67e-16,71;UBERON:0003059,8.67e-16,71;UBERON:0007282,8.67e-16,71;UBERON:0004290,8.67e-16,71;UBERON:0009618,8.67e-16,71;UBERON:0003077,1.20e-15,72;UBERON:0007285,1.20e-15,72;UBERON:0005256,1.45e-15,122;UBERON:0003102,1.00e-14,99;UBERON:0002100,2.84e-14,199;UBERON:0004111,8.85e-14,240;UBERON:0002385,1.11e-13,64;UBERON:0001015,1.11e-13,64;UBERON:0000383,1.11e-13,64;UBERON:0001134,1.44e-13,62;UBERON:0002036,1.44e-13,62;UBERON:0003082,1.44e-13,62;UBERON:0005423,3.02e-12,581;UBERON:0000490,3.63e-12,148;UBERON:0000055,6.75e-12,68;UBERON:0003914,1.32e-11,117;UBERON:0002050,1.51e-11,564;UBERON:0007500,1.58e-11,59;UBERON:0001981,1.58e-11,59;UBERON:0004537,1.58e-11,59;UBERON:0006965,1.58e-11,59;UBERON:0000922,2.21e-11,592;UBERON:0001637,8.17e-11,42;UBERON:0003509,8.17e-11,42;UBERON:0004572,8.17e-11,42;UBERON:0000923,8.23e-11,560;UBERON:0010316,8.23e-11,560;UBERON:0005291,8.23e-11,560;UBERON:0006598,8.23e-11,560;UBERON:0010317,8.23e-11,560;UBERON:0002532,8.23e-11,560;UBERON:0004872,9.51e-11,83;UBERON:0002049,2.07e-10,78;UBERON:0007798,2.07e-10,78;UBERON:0002199,2.33e-10,46;UBERON:0002416,2.33e-10,46;UBERON:0004573,1.27e-09,33;UBERON:0004571,1.27e-09,33;UBERON:0000025,2.14e-09,192;UBERON:0002097,6.79e-09,41;UBERON:0004923,2.79e-08,66;UBERON:0000926,3.60e-08,315;UBERON:0004120,3.60e-08,315;UBERON:0006603,3.60e-08,315 | |||
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| |||
|short_description=p2@GAS6 | |||
}} |
Revision as of 18:51, 11 January 2014
Short description: | p2@GAS6 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_2_at_GAS6_5end |
Coexpression cluster: | NA |
Association with transcript: | 0bp_to_ENST00000327773, ENST00000357389, NM_000820, uc001vud.2_5end |
EntrezGene: | GAS6 |
HGNC: | 4168 |
UniProt: | Q14393 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
mesodermal cell | 1.39e-16 | 121 |
fibroblast | 1.01e-15 | 76 |
smooth muscle cell | 1.14e-13 | 43 |
smooth muscle myoblast | 1.14e-13 | 43 |
muscle precursor cell | 1.17e-13 | 58 |
myoblast | 1.17e-13 | 58 |
multi-potent skeletal muscle stem cell | 1.17e-13 | 58 |
muscle cell | 9.71e-13 | 55 |
embryonic cell | 2.22e-12 | 250 |
vascular associated smooth muscle cell | 6.42e-11 | 32 |
electrically responsive cell | 1.95e-10 | 61 |
electrically active cell | 1.95e-10 | 61 |
skin fibroblast | 4.82e-08 | 23 |