FFCP PHASE1:Hg19::chr12:79258480..79258499,+: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=6857 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=11509 | |||
|TSSclassifier=strong | |||
|UniProt=P21579,Q6AI31 | |||
|association_with_transcript=31bp_to_ENST00000261205,NM_005639,uc001syt.2,uc001syu.2_5end | |||
|coexpression_cluster_id=C3 | |||
|description=CAGE_peak_3_at_SYT1_5end | |||
|id=chr12:79258480..79258499,+ | |||
|ontology_enrichment_celltype=CL:0002319!4.79e-09!25;CL:0000133!1.79e-08!59 | |||
|ontology_enrichment_celltype_v019=CL:0000333;1.57e-07;5!CL:0000064;2.61e-07;3!CL:0000067;2.61e-07;3!CL:0005012;2.61e-07;3!CL:0002304;2.61e-07;3 | |||
|ontology_enrichment_celltype_v019_2=CL:0000064,2.44e-07,3;CL:0000067,2.44e-07,3;CL:0005012,2.44e-07,3;CL:0002304,2.44e-07,3 | |||
|ontology_enrichment_development_v019=UBERON:0006601;2.42e-17;82!UBERON:0006215;6.59e-09;3 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000073!2.46e-53!94;UBERON:0001016!2.46e-53!94;UBERON:0001017!3.81e-52!82;UBERON:0005743!2.07e-51!86;UBERON:0000955!1.21e-44!69;UBERON:0006238!1.21e-44!69;UBERON:0001049!2.27e-42!57;UBERON:0005068!2.27e-42!57;UBERON:0006241!2.27e-42!57;UBERON:0007135!2.27e-42!57;UBERON:0002346!1.11e-40!90;UBERON:0003075!5.17e-40!86;UBERON:0007284!5.17e-40!86;UBERON:0002616!4.14e-39!59;UBERON:0000924!3.64e-36!173;UBERON:0006601!3.64e-36!173;UBERON:0004121!3.42e-35!169;UBERON:0000033!5.61e-33!123;UBERON:0002780!2.25e-32!41;UBERON:0001890!2.25e-32!41;UBERON:0006240!2.25e-32!41;UBERON:0000153!1.89e-31!129;UBERON:0007811!1.89e-31!129;UBERON:0003080!3.52e-31!42;UBERON:0003056!1.41e-30!61;UBERON:0001893!7.39e-27!34;UBERON:0002020!7.65e-27!34;UBERON:0003528!7.65e-27!34;UBERON:0001869!4.11e-26!32;UBERON:0002791!6.67e-26!33;UBERON:0002619!1.24e-20!22;UBERON:0000956!3.74e-20!25;UBERON:0000203!3.74e-20!25;UBERON:0001950!8.37e-19!20;UBERON:0007023!3.16e-17!115;UBERON:0004111!1.63e-15!241;UBERON:0000483!3.86e-15!309;UBERON:0000119!4.98e-15!312;UBERON:0000475!8.14e-15!365;UBERON:0000477!1.82e-14!286;UBERON:0000025!2.73e-14!194;UBERON:0003076!4.81e-12!15;UBERON:0003057!4.81e-12!15;UBERON:0000481!1.37e-11!347;UBERON:0000468!1.49e-10!659;UBERON:0000064!2.26e-10!219;UBERON:0004733!3.38e-10!12;UBERON:0002028!3.38e-10!12;UBERON:0007277!3.38e-10!12;UBERON:0000480!6.47e-10!626;UBERON:0000467!1.08e-09!625;UBERON:0000922!1.39e-09!612;UBERON:0004732!4.48e-09!13;UBERON:0002420!2.28e-08!9;UBERON:0007245!2.28e-08!9;UBERON:0010009!2.28e-08!9;UBERON:0010011!2.28e-08!9;UBERON:0000454!2.28e-08!9;UBERON:0000923!2.63e-08!604;UBERON:0005291!2.63e-08!604;UBERON:0006598!2.63e-08!604;UBERON:0002532!2.63e-08!604;UBERON:0002050!3.33e-08!605;UBERON:0005423!3.33e-08!605;UBERON:0002308!4.14e-08!9;UBERON:0000125!4.14e-08!9;UBERON:0002680!5.11e-08!9;UBERON:0001895!5.11e-08!9;UBERON:0010092!5.11e-08!9;UBERON:0000200!2.96e-07!6;UBERON:0001894!6.91e-07!7;UBERON:0006222!6.91e-07!7;UBERON:0001871!9.43e-07!7 | |||
|ontology_enrichment_uberon_v019=UBERON:0002619;6.50e-52;22!UBERON:0001869;1.15e-50;32!UBERON:0003528;2.59e-49;34!UBERON:0002020;2.59e-49;34!UBERON:0002791;3.16e-47;32!UBERON:0001950;3.80e-47;20!UBERON:0001893;1.09e-45;34!UBERON:0000956;3.96e-45;25!UBERON:0000203;3.96e-45;25!UBERON:0002780;1.92e-42;41!UBERON:0001890;1.92e-42;41!UBERON:0000073;7.97e-38;53!UBERON:0002616;7.97e-38;53!UBERON:0000955;4.23e-33;68!UBERON:0001017;5.40e-27;75!UBERON:0001016;1.92e-23;83!UBERON:0000200;3.04e-16;6!UBERON:0002021;1.12e-13;5!UBERON:0001871;1.34e-13;6!UBERON:0000349;1.49e-13;5!UBERON:0001872;1.73e-13;5!UBERON:0002420;1.86e-13;9!UBERON:0007245;1.86e-13;9!UBERON:0010009;1.86e-13;9!UBERON:0010011;1.86e-13;9!UBERON:0000454;1.86e-13;9!UBERON:0000125;7.67e-13;9!UBERON:0002308;7.67e-13;9!UBERON:0004733;2.98e-12;12!UBERON:0002028;2.98e-12;12!UBERON:0004732;3.41e-11;13!UBERON:0000369;8.17e-11;4!UBERON:0002435;8.17e-11;4!UBERON:0000204;8.17e-11;4!UBERON:0011216;2.50e-10;132!UBERON:0007023;2.67e-10;114!UBERON:0002298;6.55e-10;6!UBERON:0002680;7.34e-10;9!UBERON:0001895;7.34e-10;9!UBERON:0001894;3.91e-09;7!UBERON:0009663;4.37e-09;7!UBERON:0001870;4.40e-09;3!UBERON:0005383;2.19e-08;3!UBERON:0005382;2.19e-08;3!UBERON:0000988;5.39e-08;3!UBERON:0000013;1.57e-07;5!UBERON:0002410;1.57e-07;5!UBERON:0010314;1.73e-07;132!UBERON:0001778;2.61e-07;3!UBERON:0001775;2.61e-07;3!UBERON:0004121;8.83e-07;165!UBERON:0002784;9.51e-07;4 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000073,5.45e-72,53;UBERON:0002616,5.45e-72,53;UBERON:0001016,6.38e-69,89;UBERON:0000955,7.66e-68,68;UBERON:0006238,7.66e-68,68;UBERON:0001049,1.50e-67,56;UBERON:0005068,1.50e-67,56;UBERON:0006241,1.50e-67,56;UBERON:0007135,1.50e-67,56;UBERON:0001017,1.33e-63,81;UBERON:0002780,8.13e-61,41;UBERON:0001890,8.13e-61,41;UBERON:0003080,8.13e-61,41;UBERON:0006240,8.13e-61,41;UBERON:0003075,2.20e-59,82;UBERON:0007284,2.20e-59,82;UBERON:0002346,1.82e-58,86;UBERON:0001869,8.49e-57,32;UBERON:0003528,1.33e-56,34;UBERON:0002020,1.33e-56,34;UBERON:0003056,2.33e-56,61;UBERON:0001893,4.76e-53,34;UBERON:0002791,1.85e-52,32;UBERON:0002619,7.90e-52,22;UBERON:0001950,4.56e-47,20;UBERON:0010371,4.09e-46,104;UBERON:0000956,4.70e-45,25;UBERON:0000203,4.70e-45,25;UBERON:0004121,4.42e-41,171;UBERON:0000924,4.42e-41,171;UBERON:0006601,4.42e-41,171;UBERON:0010314,2.69e-35,132;UBERON:0007023,4.63e-31,114;UBERON:0011216,6.65e-27,223;UBERON:0000025,4.71e-17,192;UBERON:0000200,3.30e-16,6;UBERON:0002021,1.19e-13,5;UBERON:0001871,1.39e-13,6;UBERON:0000349,1.54e-13,5;UBERON:0004111,1.83e-13,240;UBERON:0001872,1.88e-13,5;UBERON:0002420,1.94e-13,9;UBERON:0007245,1.94e-13,9;UBERON:0010009,1.94e-13,9;UBERON:0010011,1.94e-13,9;UBERON:0000454,1.94e-13,9;UBERON:0000125,6.84e-13,9;UBERON:0002308,6.84e-13,9;UBERON:0004733,2.81e-12,12;UBERON:0002028,2.81e-12,12;UBERON:0007277,2.81e-12,12;UBERON:0000483,1.40e-11,306;UBERON:0000119,2.46e-11,309;UBERON:0004732,3.24e-11,13;UBERON:0000369,8.10e-11,4;UBERON:0002435,8.10e-11,4;UBERON:0000204,8.10e-11,4;UBERON:0010082,8.10e-11,4;UBERON:0002298,6.08e-10,6;UBERON:0002680,6.13e-10,9;UBERON:0001895,6.13e-10,9;UBERON:0010092,6.13e-10,9;UBERON:0003076,1.61e-09,15;UBERON:0003057,1.61e-09,15;UBERON:0001894,4.31e-09,7;UBERON:0006222,4.31e-09,7;UBERON:0009663,4.54e-09,7;UBERON:0001870,4.59e-09,3;UBERON:0005383,2.14e-08,3;UBERON:0005382,2.14e-08,3;UBERON:0000988,4.08e-08,3;UBERON:0000923,8.75e-08,560;UBERON:0010316,8.75e-08,560;UBERON:0005291,8.75e-08,560;UBERON:0006598,8.75e-08,560;UBERON:0010317,8.75e-08,560;UBERON:0002532,8.75e-08,560;UBERON:0002050,1.32e-07,564;UBERON:0000013,2.08e-07,5;UBERON:0002410,2.08e-07,5;UBERON:0001778,2.44e-07,3;UBERON:0001775,2.44e-07,3;UBERON:0000922,6.13e-07,592;UBERON:0005423,6.98e-07,581;UBERON:0002784,9.54e-07,4 | |||
|phase1_expression=0,0,0.140954404095971,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.492484232307152,0.204000691244253,0.626909442956176,0,0.410623275218653,0.376627918784408,0,0,0,0,0,0.154816123316076,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.75996244461323,0,0.889509253863555,0,0,0,0,0,0.569212969109448,0,0.382273228125229,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.32348744029695,1.10864698731282,1.75669571386252,0.72038491523742,0,0.370784442784429,0,0,0,0,0,0,0,0,0,0,0,0,0,0.516833518338658,1.42306505074684,1.00416183829401,0,0,0.24406205754817,0,0,0.0892997282840798,0,0,0,0,0.183201743930407,0,0,0.436094052142534,0,0,0.529636723252875,0.860509862246441,0.354668382198357,0,0,0.49333509683432,0.311211035399766,0.269421344139376,0.163461903113459,0,0,0.234321431833797,0,0,0,0.352303495931295,0,0,0.204154171254893,0.859840221182376,0.309977343527296,0,0,0,0,0.336672227908132,0.250237039743928,0.277064115484183,0,0,0,0.113432183160021,0.179389635688862,0,0,0.900273288253207,0.206105058476878,0,0.18611685633159,0,0,0,0,0,0.355009592516614,0,0,0,0,0,0.243947412259191,0.265059536642971,0.232387885739037,0.310983165046111,0,0.72995471815166,0,0.643240938192885,1.38134921352481,0,0,0,0,0,0,0,0,0,0,0,0,1.40241773803446,0,0,0,0,0.590789906681404,0,0,0.514703430895577,0.219500570817251,0,0,0.0925884451585296,0,0,1.44331342025273,1.04337364477569,0.70445216541493,0.288732895522148,0.925971025153221,0.380508304469197,0,0,0,0,0,0,0,0,0.179117045405697,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.224262168690721,0,0,0.129271715757778,0,0,0,0,0,0,0,0,0,0.823240336780769,0,0,0,0.301439377059586,0,0.099972991182057,0,0,0,0.239624855491583,0,0,0,0,0.179060963239896,0,0,0,0.128343036279748,0.508189248444927,2.60279707715243,0.773288812777695,3.51784157202132,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.347534457872331,0.195801157462741,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0821271560138091,0,0,0.120859449591622,0.200506470303285,0,0.114814448164607,0,0.262248829918848,0,0.231046011313244,0,0,0.211103257785751,0,0,0.647747748306418,0,0.270946437543853,0,0.254876273045038,0,0,0,0,0,0,0.325378394664303,0,0.0915694648183434,0,0,0,1.6068392984416,0,0,0.15350367472613,0,0.429680979473094,0.435050081742686,0.340906509664404,0.0890320356467374,0,0,0.127612712494584,0,0,1.25924938732256,0,0,0,0,0,0.286249773483982,0.372158369359667,0.316379424718726,0.190630193923825,0.255897791311334,0,0,0.78494864019923,0.179872457583315,0.274537029736055,0.117812402345686,0,0,0,0,0,0,0,0.141405431953713,0,1.10273068709225,0,0,0,0,0.202910376962704,0,0.281695602532241,0,0.491245205065606,0,0,0,0,0,0,0.0962221127255121,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.111443384277478,0,0,0.296964680832639,0,21.8712482508586,4.92342957436795,0,0,0,0.19924798825107,0,0,0.102268682502155,0,0.311039587661807,0,0,0,0.0986434056369336,0,0,6.78532922266653,12.6164613500118,7.98455192004777,0,0,0,0,1.27126825146383,0,0.344743373241465,0.583209226766509,1.38899995946634,5.31444831488303,5.06505042226713,16.7839909948792,8.84634079449797,7.38869047383869,11.4080406520066,0,0,0.153900517007594,0,0,0,0,0,0.274792780205587,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.593042257361244,0.123563938946503,0.313265848516366,0.943615861729479,0,5.85661114313348,0,0,0,0,0,7.65181904076225,0.505492637027904,0,0,0,0.330991955875499,0.627865836814451,0,0,0,0,0,0,0,1.20390222730132,0,0,0,0,0,1.58186518546373,0,0,13.1053347628669,0,0.320635281006135,0.213452994739353,0.19980960958213,0,0.458146384663663,1.88754497648161,0,0.248505071130865,0,0.407712618220842,0.209205692624666,0,1.44475294950759,2.40168115483916,0.684526894459965,0,0,0.262887354279314,0,0,0,0,0,0,0,0.360299883542404,0,0,0,0,0.295282444544246,0,11.9284453471395,5.0395260261283,0.482259445395058,0.825236619583403,0.415440338029185,0,0,9.71992906528395,0,0,0.629455057619977,0.105600336519406,0.537862017998534,0,0,0,0,0,0,0.326587360109409,0,0,0,0,0,0,2.19781025814636,1.71902382265497,0.684347351537318,0,0,0,0,0,0.197611631897944,0,0,0,0,0,0,2.66991963625398,17.7213635993397,14.6431517882356,7.63664677309649,1.14681839138014,0.998361463831671,2.48385611765534,0.691743174681154,0.74988244777264,0,0,0,0,0.144921028610825,0,0,0,0,0,0,0.457680136793847,0,0.466311601748341,0.73927574994817,0.159296767163702,0,0.465788870628778,0.829412415681711,0.265841714557995,0,0.150257608997218,0,0.406870733204662,0.181848659202559,0.429642228169954,0.464033759878494,0,0,0,0,0,0.770479321629213,0.214441591374926,0,0.680117776536817,0,0,0,0,0,0.530067437837643,0,0,0,0,0,8.57202304140731,0,0,0,0,0,0,0.39997479170986,0,0,0,0.368211900503681,0,3.11038630016486,1.02315497042921,2.80344509631373,1.57265941855896,1.09209638192014,0,1.06287460050841,0.371807292777007,0,0,0.70975570501128,0.80057074828547,0,0,9.12054996369725,18.420554922326,3.51194489925733,11.0762836690008,9.07458106398185,8.71381381049145,8.55820921848811,0,0,0,0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| |||
|short_description=p3@SYT1 | |||
}} |
Revision as of 14:51, 11 January 2014
Short description: | p3@SYT1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_3_at_SYT1_5end |
Coexpression cluster: | C3_occipital_temporal_insula_medial_postcentral_frontal_amygdala |
Association with transcript: | 31bp_to_ENST00000261205, NM_005639, uc001syt.2, uc001syu.2_5end |
EntrezGene: | SYT1 |
HGNC: | 11509 |
UniProt: | P21579Q6AI31 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
ciliated cell | 2.44e-07 | 3 |
ciliated epithelial cell | 2.44e-07 | 3 |
multi-ciliated epithelial cell | 2.44e-07 | 3 |
non-pigmented ciliary epithelial cell | 2.44e-07 | 3 |