FFCP PHASE1:Hg19::chr12:123756623..123756646,-: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=8099 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=14002 | |||
|TSSclassifier=strong | |||
|UniProt=O14519 | |||
|association_with_transcript=40bp_to_ENST00000261692,NM_004642,uc001ueq.2_5end | |||
|description=CAGE_peak_3_at_CDK2AP1_5end | |||
|id=chr12:123756623..123756646,- | |||
|ontology_enrichment_celltype=CL:0000066!1.50e-13!254;CL:0002321!1.55e-13!248;CL:0000220!3.45e-13!246;CL:0000213!1.26e-11!57;CL:0000215!1.26e-11!57;CL:0000222!3.70e-11!119;CL:0000115!2.85e-10!35;CL:0002078!4.46e-09!44;CL:1000449!6.65e-08!16;CL:0002139!1.37e-07!24;CL:1000497!4.57e-07!18;CL:0002518!4.57e-07!18;CL:0000055!7.89e-07!180 | |||
|ontology_enrichment_celltype_v019=CL:0000115;1.52e-09;36!CL:1000449;4.04e-09;15!CL:1000497;5.35e-08;17!CL:0002518;5.35e-08;17!CL:0002139;7.73e-08;24!CL:0002681;1.02e-07;12!CL:0002584;1.02e-07;12!CL:0000213;1.83e-07;58!CL:0000215;1.83e-07;58!CL:0002078;8.05e-07;45 | |||
|ontology_enrichment_celltype_v019_2=CL:0002321,3.52e-13,250;CL:0000066,1.17e-12,253;CL:0000213,4.48e-12,58;CL:0000215,4.48e-12,58;CL:0000222,4.23e-11,121;CL:0000115,7.95e-11,36;CL:0002078,1.92e-09,45;CL:1000449,2.77e-09,15;CL:1000497,3.15e-08,17;CL:0002518,3.15e-08,17;CL:0002139,5.82e-08,24;CL:0002681,9.39e-08,12;CL:0002584,9.39e-08,12 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000477!2.76e-24!286;UBERON:0004111!2.90e-23!241;UBERON:0000025!1.14e-18!194;UBERON:0000119!1.74e-16!312;UBERON:0000483!2.22e-16!309;UBERON:0000468!4.72e-15!659;UBERON:0000467!2.20e-14!625;UBERON:0000480!3.57e-14!626;UBERON:0000475!8.22e-13!365;UBERON:0003914!1.52e-12!118;UBERON:0000064!3.54e-12!219;UBERON:0000481!5.20e-12!347;UBERON:0000922!3.73e-10!612;UBERON:0000923!1.49e-09!604;UBERON:0005291!1.49e-09!604;UBERON:0006598!1.49e-09!604;UBERON:0002532!1.49e-09!604;UBERON:0002050!1.52e-09!605;UBERON:0005423!1.52e-09!605;UBERON:0000055!1.04e-08!69;UBERON:0006554!1.55e-08!44;UBERON:0001008!1.85e-08!45;UBERON:0004872!1.90e-08!84;UBERON:0002049!1.93e-08!79;UBERON:0007798!1.93e-08!79;UBERON:0004211!6.65e-08!16;UBERON:0001285!6.65e-08!16;UBERON:0007684!6.65e-08!16;UBERON:0003220!6.65e-08!16;UBERON:0004208!6.65e-08!16;UBERON:0006555!1.13e-07!17;UBERON:0005103!1.13e-07!17;UBERON:0000083!1.13e-07!17;UBERON:0009201!1.13e-07!17;UBERON:0004819!1.13e-07!17;UBERON:0006553!1.13e-07!17;UBERON:0003074!1.13e-07!17;UBERON:0003060!1.13e-07!17;UBERON:0009569!1.31e-07!113;UBERON:0002100!1.88e-07!216;UBERON:0000353!1.93e-07!17;UBERON:0000466!2.23e-07!126;UBERON:0004121!3.96e-07!169;UBERON:0000080!4.12e-07!18;UBERON:0002120!4.12e-07!18;UBERON:0004875!4.12e-07!18;UBERON:0005721!4.12e-07!18;UBERON:0005754!4.12e-07!18;UBERON:0007297!4.12e-07!18;UBERON:0003103!4.19e-07!69;UBERON:0004876!4.44e-07!20;UBERON:0003075!5.20e-07!86;UBERON:0007284!5.20e-07!86;UBERON:0001049!5.31e-07!57;UBERON:0005068!5.31e-07!57;UBERON:0006241!5.31e-07!57;UBERON:0007135!5.31e-07!57;UBERON:0003104!9.49e-07!238;UBERON:0009142!9.49e-07!238 | |||
|ontology_enrichment_uberon_v019=UBERON:0006554;1.90e-09;30!UBERON:0001008;1.90e-09;30!UBERON:0006555;4.04e-09;15!UBERON:0004819;4.04e-09;15!UBERON:0001285;4.04e-09;15!UBERON:0007684;4.04e-09;15!UBERON:0000353;1.20e-08;15!UBERON:0002113;3.15e-08;24!UBERON:0011143;3.15e-08;24!UBERON:0000489;4.96e-08;29!UBERON:0001225;1.02e-07;12!UBERON:0008987;1.02e-07;12 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0004111,8.71e-23,240;UBERON:0000025,2.77e-18,192;UBERON:0000119,1.15e-15,309;UBERON:0000483,1.47e-15,306;UBERON:0003914,1.86e-13,117;UBERON:0006554,1.12e-10,47;UBERON:0001008,1.41e-10,48;UBERON:0004211,2.77e-09,15;UBERON:0009773,2.77e-09,15;UBERON:0001231,2.77e-09,15;UBERON:0001285,2.77e-09,15;UBERON:0007684,2.77e-09,15;UBERON:0004208,2.77e-09,15;UBERON:0006555,5.74e-09,16;UBERON:0004819,5.74e-09,16;UBERON:0000055,8.99e-09,68;UBERON:0000353,1.09e-08,15;UBERON:0002049,1.15e-08,78;UBERON:0007798,1.15e-08,78;UBERON:0004872,1.66e-08,83;UBERON:0000922,2.18e-08,592;UBERON:0005423,2.89e-08,581;UBERON:0001225,9.39e-08,12;UBERON:0008987,9.39e-08,12;UBERON:0003103,1.09e-07,68;UBERON:0000489,1.40e-07,31;UBERON:0002113,1.56e-07,26;UBERON:0003918,1.56e-07,26;UBERON:0011143,1.56e-07,26;UBERON:0005095,1.56e-07,26;UBERON:0007687,1.56e-07,26;UBERON:0011216,1.75e-07,223;UBERON:0003075,1.84e-07,82;UBERON:0007284,1.84e-07,82;UBERON:0009569,4.22e-07,112;UBERON:0002417,6.21e-07,60;UBERON:0000916,6.21e-07,60 | |||
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| |||
|short_description=p3@CDK2AP1 | |||
}} |
Revision as of 16:32, 11 January 2014
Short description: | p3@CDK2AP1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_3_at_CDK2AP1_5end |
Coexpression cluster: | NA |
Association with transcript: | 40bp_to_ENST00000261692, NM_004642, uc001ueq.2_5end |
EntrezGene: | CDK2AP1 |
HGNC: | 14002 |
UniProt: | O14519 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
embryonic cell | 3.52e-13 | 250 |
epithelial cell | 1.17e-12 | 253 |
lining cell | 4.48e-12 | 58 |
barrier cell | 4.48e-12 | 58 |
mesodermal cell | 4.23e-11 | 121 |
endothelial cell | 7.95e-11 | 36 |
meso-epithelial cell | 1.92e-09 | 45 |
epithelial cell of nephron | 2.77e-09 | 15 |
kidney cell | 3.15e-08 | 17 |
kidney epithelial cell | 3.15e-08 | 17 |
endothelial cell of vascular tree | 5.82e-08 | 24 |
kidney cortical cell | 9.39e-08 | 12 |
renal cortical epithelial cell | 9.39e-08 | 12 |