FFCP PHASE1:Hg19::chr11:63527205..63527210,+: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport= | |||
|DPIdataset=robust | |||
|EntrezGene=10313 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=10469 | |||
|TSSclassifier=not | |||
|UniProt=Q9BVW7 | |||
|association_with_transcript=388bp_to_BC000865_5end | |||
|coexpression_cluster_id=C32 | |||
|description=CAGE_peak_5_at_RTN3_5end | |||
|id=chr11:63527205..63527210,+ | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019=UBERON:0006241;2.38e-12;3!UBERON:0003057;2.38e-12;3!UBERON:0006601;1.32e-08;82 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001049!1.28e-31!57;UBERON:0005068!1.28e-31!57;UBERON:0006241!1.28e-31!57;UBERON:0007135!1.28e-31!57;UBERON:0002020!3.05e-26!34;UBERON:0003528!3.05e-26!34;UBERON:0002780!2.95e-25!41;UBERON:0001890!2.95e-25!41;UBERON:0006240!2.95e-25!41;UBERON:0001017!1.03e-24!82;UBERON:0002616!1.32e-24!59;UBERON:0003080!2.08e-24!42;UBERON:0001893!1.56e-23!34;UBERON:0002346!1.65e-23!90;UBERON:0001869!2.88e-23!32;UBERON:0005743!7.46e-23!86;UBERON:0000955!1.03e-22!69;UBERON:0006238!1.03e-22!69;UBERON:0002791!1.11e-22!33;UBERON:0000073!2.67e-22!94;UBERON:0001016!2.67e-22!94;UBERON:0003075!6.38e-22!86;UBERON:0007284!6.38e-22!86;UBERON:0002619!3.81e-21!22;UBERON:0001950!2.02e-18!20;UBERON:0000956!6.87e-18!25;UBERON:0000203!6.87e-18!25;UBERON:0007023!4.20e-16!115;UBERON:0003056!1.13e-13!61;UBERON:0000924!2.05e-13!173;UBERON:0006601!2.05e-13!173;UBERON:0004121!2.88e-12!169;UBERON:0000153!2.39e-11!129;UBERON:0007811!2.39e-11!129;UBERON:0000033!1.82e-10!123;UBERON:0002420!4.98e-10!9;UBERON:0007245!4.98e-10!9;UBERON:0010009!4.98e-10!9;UBERON:0010011!4.98e-10!9;UBERON:0000454!4.98e-10!9;UBERON:0002308!5.62e-10!9;UBERON:0000125!5.62e-10!9;UBERON:0001871!4.80e-09!7;UBERON:0000200!1.33e-08!6;UBERON:0003076!2.54e-08!15;UBERON:0003057!2.54e-08!15;UBERON:0000349!9.19e-08!5;UBERON:0009663!2.58e-07!7;UBERON:0001872!6.52e-07!5 | |||
|ontology_enrichment_uberon_v019=UBERON:0003528;2.95e-36;34!UBERON:0002020;2.95e-36;34!UBERON:0002791;2.52e-30;32!UBERON:0002780;4.78e-30;41!UBERON:0001890;4.78e-30;41!UBERON:0002619;6.75e-30;22!UBERON:0000073;1.88e-29;53!UBERON:0002616;1.88e-29;53!UBERON:0000349;1.01e-28;5!UBERON:0001893;1.84e-27;34!UBERON:0001869;5.75e-27;32!UBERON:0000956;2.62e-26;25!UBERON:0000203;2.62e-26;25!UBERON:0002420;4.63e-24;9!UBERON:0007245;4.63e-24;9!UBERON:0010009;4.63e-24;9!UBERON:0010011;4.63e-24;9!UBERON:0000454;4.63e-24;9!UBERON:0000125;6.63e-24;9!UBERON:0002308;6.63e-24;9!UBERON:0001950;6.88e-20;20!UBERON:0001954;5.36e-19;2!UBERON:0003022;5.36e-19;2!UBERON:0002421;5.36e-19;2!UBERON:0002600;5.36e-19;2!UBERON:0001876;1.20e-18;2!UBERON:0001897;1.63e-18;2!UBERON:0010225;1.63e-18;2!UBERON:0002148;2.32e-18;2!UBERON:0006331;2.32e-18;2!UBERON:0009662;2.32e-18;2!UBERON:0001017;7.69e-16;75!UBERON:0001016;1.11e-13;83!UBERON:0002298;1.49e-13;6!UBERON:0000955;5.83e-13;68!UBERON:0000988;1.45e-12;3!UBERON:0002240;2.38e-12;3!UBERON:0005174;2.38e-12;3!UBERON:0001137;2.38e-12;3!UBERON:0001871;5.93e-12;6!UBERON:0004733;1.04e-11;12!UBERON:0002028;1.04e-11;12!UBERON:0009663;1.07e-11;7!UBERON:0004732;7.96e-11;13!UBERON:0002038;6.91e-10;1!UBERON:0003112;6.91e-10;1!UBERON:0011158;6.91e-10;1!UBERON:0009661;6.91e-10;1!UBERON:0002950;6.91e-10;1!UBERON:0003128;6.91e-10;1!UBERON:0001891;6.91e-10;1!UBERON:0001703;6.91e-10;1!UBERON:0002241;6.91e-10;1!UBERON:0002784;1.01e-09;4!UBERON:0002680;3.26e-09;9!UBERON:0001895;3.26e-09;9!UBERON:0001872;5.99e-08;5!UBERON:0011216;9.26e-08;132!UBERON:0000200;8.15e-07;6 | |||
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|phase1_expression=0,0.214100523890983,0,0,0,0,0,0,0,0,0,0,0,0,0,0.672325146451775,0,0,0,0,0,0,0,0,0,0.0764134057479513,0,0,0,0.383829398097213,0.154816123316076,0,0,0,0,0,0,0,0,0,0.223915474239924,0,0,0,0.377875943688809,0.242584061187816,0,0,0,0.28769239232215,0,0,0,0,0,0,0,0.224723484445085,0,0.320929027076094,0,0,0,0,0.290209238628584,0,0,0,0,0,0,0.368277635987565,0,0.211255286311942,0,0,0,0.150176892841506,0,0,0,0,0,0,0,0.426730222566507,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.132957960518865,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.379891534993739,0,0,0.354668382198357,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.30648779579902,0,0.113432183160021,0,0,0,0,0,0,0,0,0,0,0.0920498986422993,0,0,0,0.169560592310488,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.110293972732394,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0925884451585296,0,0,0,0,0,0.144366447761074,0,0,0,0,0.246217006087397,0.234004265139238,0.148631162288728,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.129271715757778,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.239624855491583,0,0,0,0,0,0.224170287987055,0.197030760201927,0,0,0,0,0,0,0,0.749007023947182,0,0,0,0,0,0.415941723061614,0,0.157702415033935,0.234282829985426,0,0,0,0,0,0.260650843404249,0,0,0,0,0.106727557803444,0,0,0,0,0,0,0,0,0,0,0.154209693802656,0,0,0,0,0,0,0.0920809889358963,0,0,0,0,0.0770153371044148,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.103041011647722,0.0915694648183434,0,0,0,0,0,0,0,0,0.214840489736547,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0982490410131212,0,0,0,0,0,0,0,0,0,0.188287601553558,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0711418433484141,0,0,0,0,0.324621940274555,0,0.228234679033192,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.4098700508785,0,0,0,0,0,0.23874448473769,0,0,1.9882952955326,6.47079315488359,0,0,0.211125408127993,0,0,0.503865495708552,0,0,0,0,0,0,0,0,0,0.969332746095218,0.278304294485554,0,0.260427761085233,0,0,0.1137934482855,0.254253650292766,0,0,0,0.173624994933292,0.885741385813839,2.17073589525734,0,1.21637185924347,0.591095237907095,0.438770794307945,0.10893846351899,0,0.0769502585037971,0,0,0,0,0,0,0,0,0,0,0,0,0,0.189753732724185,0,0,0.163232808159148,0,0,0,0.0884575645033392,0,0,0.247127877893006,0,0,0,0.234264445725339,0.182454789215666,0,0,0.394584402849391,0,0.30607276163049,0,0,0,0,0,0,0,0,0.277349346026277,0,0,0,0,0.171986032471617,0,0.0730893170861856,0.164230914106418,0.0969890164884194,0.0882561266915003,0.225980740780532,0,0,0.253243183823515,0.391102765469606,0,0,0.39961921916426,0,0,0,0.14405479798815,0.124252535565433,0,0,0,0.203996435272644,0,0,1.50595916781192,0,0,0,0.279282401272254,0,0.717873024576814,0,0,0,0,0.360299883542404,0,0,0,0,0.196854963029498,0,3.97614844904652,3.54128855890097,0,0.137539436597234,0.415440338029185,0,0,0.182248669974074,0,0,0,0,0,0,0,0,0,0,0,0,0,0.164185041498678,0.170388021785422,0,0,0,2.58565912723101,1.71902382265497,0,0,0,0,0,0,0,0,0,0,0.2506898940227,0.919036730290385,0,0,0.886068179966986,0.854183854313742,2.754200475543,1.14681839138014,0.998361463831671,0.0620964029413835,0,0,0,0,0.235265819698172,0.468334905806882,0.144921028610825,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.380805212168795,0,0,0,0.464033759878494,0,0.400027764663154,0,0,0,0.192619830407303,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.90342715918635,0,0,0,0.327609848846413,0,0,0,0.106691729694141,0.172214979660816,0,0,0,0,0,0.107824811396682,0.157265941855896,0.218419276384028,0.169732529954025,0.212574920101683,0.123935764259002,0,0,0.0788617450012534,0,0,0,0.0642292250964595,0,4.62938191265739,0.82046545696302,0.252071696221718,0,1.45328081068666,0,0,0.11796972334774,0,0,0,0,0,0,0,0,0.261906694481422,0,0,0.202612753855184,1.56215619722769,3.30698874401895,0.0634158101939068,0.546974809018219,0,0,0,0.127762427639595,0,0.336283722218824,0,0,0,0,0,0,0.197318320688547,0,0.333694205676207,0,0.942693539496011,0,0,0,0.47775168788705,0,0,0,0,0,0,0,0,0,0,0,0.423387050190929,0,0,0,0,0,0,0,0,0,0.485710993059139,0,0,0,0,0.109940516745429,0,0.0771741581079447,0.218559560503957,0,0,0,1.76677620403451,0.594092800654172,1.2679671827502,0,0,0,0,0,0,0,0,0,1.29005624836306,0,0.271965960763659,1.30905207102113,0,0.371995018166751,0,0,0.126166424835079,0,0.253397002022874,0,0,0,0,0,0,3.31667775783512,1.13776295448085,0.213233981900981,0.23806443146374,0,0,0,0,0,0,0,0,0,0.332660356546013,0,0,0,0.269475606319761,0,0,0,0,0,0 | |||
|short_description=p5@RTN3 | |||
}} |
Revision as of 08:18, 11 January 2014
Short description: | p5@RTN3 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | No |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_5_at_RTN3_5end |
Coexpression cluster: | C32_middle_occipital_parietal_hippocampus_amygdala_medial_olfactory |
Association with transcript: | 388bp_to_BC000865_5end |
EntrezGene: | RTN3 |
HGNC: | 10469 |
UniProt: | Q9BVW7 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data