FFCP PHASE1:Hg19::chr11:2160538..2160549,-: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=3481 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=5466 | |||
|TSSclassifier=strong | |||
|UniProt=P01344 | |||
|association_with_transcript=69bp_to_ENST00000416167_5end | |||
|coexpression_cluster_id=C172 | |||
|description=CAGE_peak_45_at_IGF2_5end | |||
|id=chr11:2160538..2160549,- | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019=CL:0000349;1.25e-22;19!CL:0002541;2.49e-09;3!CL:0002577;5.49e-09;3!CL:0002575;3.24e-07;2!CL:0002536;7.76e-07;2 | |||
|ontology_enrichment_celltype_v019_2=CL:0000349,9.60e-23,19;CL:0002541,2.36e-09,3;CL:0002577,4.47e-09,3;CL:0002575,3.20e-07,2;CL:0002536,8.10e-07,2 | |||
|ontology_enrichment_development_v019=UBERON:0003104;2.59e-10;31!UBERON:0004161;7.95e-09;11!UBERON:0009497;2.39e-07;13 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0005631!1.33e-12!14;UBERON:0000158!1.33e-12!14;UBERON:0000478!1.05e-09!24;UBERON:0003124!1.60e-09!7;UBERON:0004119!2.55e-08!169;UBERON:0000925!2.55e-08!169;UBERON:0006595!2.55e-08!169;UBERON:0007023!3.18e-07!115 | |||
|ontology_enrichment_uberon_v019=UBERON:0000478;1.58e-23;24!UBERON:0005631;9.58e-18;10!UBERON:0000158;9.58e-18;10!UBERON:0000922;1.06e-11;49!UBERON:0001987;1.16e-11;4!UBERON:0000305;1.47e-10;7!UBERON:0003124;2.49e-09;3!UBERON:0000920;2.49e-09;3!UBERON:0004151;2.17e-08;3!UBERON:0005409;5.76e-08;22 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0005631,1.48e-27,14;UBERON:0000158,1.48e-27,14;UBERON:0000478,1.24e-23,24;UBERON:0003124,2.14e-19,7;UBERON:0001987,9.40e-12,4;UBERON:0004340,9.40e-12,4;UBERON:0000305,1.47e-10,7;UBERON:0000920,2.36e-09,3;UBERON:0004871,3.51e-09,8;UBERON:0004151,1.73e-08,3;UBERON:0004923,5.50e-07,66;UBERON:0005409,7.01e-07,25 | |||
|phase1_expression=0.181678379270557,0,0,0,0,3.48935409640147,0,0,0,0,0,7.42700665242586,6.33040747748289,0.37129905888014,0.331397375727916,0,0,0,0,0,0.816002764977012,0,0,0,0,0,0,0,0,0,0.154816123316076,0,0.30120591877825,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.130979075497713,0,0,0,0,0,0,0,0,0.198762407366705,0,0,0,0,0.275118041940067,0.208994966536811,0,0,0,0,0,0,0,0.81014194788176,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.311211035399766,0,0,1.05950199351452,0.576175924479999,0,0,0,0,0,0,0,0,0,0,1.18800285728205,0.494533858557114,0,0,0.168336113954066,0.375355559615893,0,0,0,0.45071417671979,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.580969714347592,0.207322110030741,0.252320850875628,0,0,0,0,0.928735856063958,0,0,0,0,0,0,0,0,0,0,0,0,0,1.47008711385542,0,0,0.590789906681404,0,4.05861847192275,0,0,0,0,0.277765335475589,0,0,0,0,0.117408694235822,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.207328115540772,0,0,0,0,0,0,0,0,0,0,3.05172048183296,0,0,0,0,0,0,0.257207374262142,0,0.266422179016099,0.285955987316295,8.13932408087165,1.64648067356154,0,0,0,0,0,0,0,0,0,0,0,0,0.289562613335158,0.410952645100767,0,0,0,0,0,0,0,0,0,0,0,0,0,0.613457458595699,0,0.813795071099207,0.415941723061614,0.178428988797162,0.157702415033935,0.585707074963566,0.601892199455438,0,1.03473071292505,0,0,0,13.3144787074664,20.5886054286514,0,0,0,1.5156378572313,4.99306318531491,11.7932214398575,0,0,0,0,1.02341449813341,0,0,0,0,0,0.519254429183621,0,6.64726972753922,0,0,0.114814448164607,0,0.262248829918848,0,0,0,0,0,1.13733384070897,0.170093705276516,0.431831832204279,0,0.270946437543853,0,0,0,0,0,0,0,0,0,2.88514832613622,0,0,0,0,0,0.290012154876366,0,0.15350367472613,0.137836572484531,0,0.290033387828457,0.0852266274161009,1.95870478422822,0,0.192190067365106,0,0,0,0,0,0,0,0,0,0,0.372158369359667,0.316379424718726,0,0.255897791311334,2.99557291623744,0,0,0,0,0.117812402345686,0,0,0,0.975267478179181,0,0,0.9554993798559,0,0,0,0,0,0,0,0,0,0,0,0.196498082026242,0,0,0,0,0,0,0,0,0,3.38917682796405,1.72202149068492,0,0,0.918893600827838,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.223676107892416,0,0,0,1.23087398947712,0,0,0,0,0.73254089635947,0,0,0,12.1759687216222,6.83018765915069,28.8731059973278,0,0,0,0,0,0.597743964753209,0,0.503865495708552,0,0,0,0,0,0,0.690503839458535,0,0,0,0.0927680981618513,0,0,0,4.34999745260876,0,0,0,0,0,0,0,0,0,0,0,0.219385397153973,0,0,0.615602068030377,0,2.76676685265672,0,0,10.5270382711533,1.4655614944298,51.7043732738076,0,0,0,0,0,0,0,0,0,0,0.282706142867882,0,0,0.176915129006678,7.33236173920351,0,0,0,0.202203398942031,17.6567082405734,0,0,0,0,0,8.46935012340647,0.91821828489147,0.505492637027904,0,0,0,0.330991955875499,0.313932918407225,0,0,0,0,0,0,0.873633341210151,0,0,0,0,0.290967049465258,0,4.29363407483012,0,0,0.126621591911757,0,0,0,3.9961921916426,0,0,23.8517047028131,0,0,0,0,0,0,0,0,0,0,0,0,0.837847203816763,0.687481272035051,2.15361907373044,1.59743200399193,0.429226048136571,0.223171457441873,2.8217058444425,0.360299883542404,1.16495949527454,6.77535367842123,7.49984311268615,8.56025006948148,3.34653437150146,0,0,0,0,0,0,0,0,0,0,0.157611414598396,2.25554728980492,0.105600336519406,0,0,2.85878130549347,1.98627591109629,0,0,0,0,0,0,0,0.113312091520126,0,68.9035822343551,0,0,0,0,0.106787412567695,1.57204305099666,0,0,0,0,0,0,0.5013797880454,0,0,0,0,0,0,0,0.110929051536852,0.124192805882767,0,0,0,0,0.235265819698172,0,0,0,0,0,0,0,0,0,0,0,0,0,0.449803112163605,0,0,0,0,0,0,0,0,0,0,0,0.800055529326307,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.211312123358627,0,0,0,3.40509572140102,0,0,0,0,0,0,0.109209638192014,0,0,0,0,0,0,0,0,0.3062454773532,0,0,0,0,0.756215088665154,0,0,0,0,0,0,0,0,0,0.795664888465099,0.752103283492572,0,0,0,0,0,0.0675375846183947,0,0,0,0.546974809018219,0,0,0,0,0,0,0.606965604236632,0,9.84596308805291,0,0,0.0679697329768317,0,0,0,0.156986185701028,0,4.48435461302062,2.73947616152849,0,0,0.643288897589907,0.316027223465453,0,8.34519707052381,0,0,0,0,0,0,0,1.27016115057279,0.22910686854405,0,0,0,0,1.09726132484042,1.29485767437579,0.615976841137482,77.7075668996593,24.285549652957,0,4.77481860387284,0,0,0,0,0.0771741581079447,1.74847648403166,0,0.245148321753905,0,0.588925401344836,0,3.3812458206672,0,0.0939839179798536,0.45120521581504,0,0,0,0,4.3820183294791,0,0,0.157771562193185,0,1.30905207102113,4.2322147241232,0,0,0,0,0,0,0,0,0,0,1.21245917149183,0.803892390468535,0,0,0.213233981900981,10.2367705529408,0.258355639344024,0.806971285846153,0,0,2.22328907854041,0.653150243690884,32.854396904187,0,0.0717222053926763,13.3064142618405,0.325613074443898,0,0,0.718601616852695,16.4248659682418,0.611207220914332,4.06896178315738,0.665756774185513,0.402547587182052,0 | |||
|short_description=p45@IGF2 | |||
}} |
Revision as of 06:10, 11 January 2014
Short description: | p45@IGF2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_45_at_IGF2_5end |
Coexpression cluster: | C172_chorionic_skeletal_tongue_amniotic_liver_gastrointestinal_Pericytes |
Association with transcript: | 69bp_to_ENST00000416167_5end |
EntrezGene: | IGF2 |
HGNC: | 5466 |
UniProt: | P01344 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
extraembryonic cell | 9.60e-23 | 19 |
chorionic membrane mesenchymal stem cell | 2.36e-09 | 3 |
placental epithelial cell | 4.47e-09 | 3 |
central nervous system pericyte | 3.20e-07 | 2 |
amniotic epithelial cell | 8.10e-07 | 2 |
Ontology term | p-value | n |
---|---|---|
extraembryonic membrane | 1.48e-27 | 14 |
membranous layer | 1.48e-27 | 14 |
extraembryonic structure | 1.24e-23 | 24 |
chorion | 2.14e-19 | 7 |
placenta | 9.40e-12 | 4 |
allantois | 9.40e-12 | 4 |
amnion | 1.47e-10 | 7 |
egg chorion | 2.36e-09 | 3 |
somatic layer of lateral plate mesoderm | 3.51e-09 | 8 |
cardiac chamber | 1.73e-08 | 3 |
organ component layer | 5.50e-07 | 66 |
gastrointestinal system | 7.01e-07 | 25 |