FFCP PHASE1:Hg19::chr11:2154382..2154391,+: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene= | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC= | |||
|TSSclassifier=strong | |||
|UniProt= | |||
|association_with_transcript=164bp_to_CU674261_5end | |||
|coexpression_cluster_id=C172 | |||
|description=CAGE_peak_6_at_CU674261_5end | |||
|id=chr11:2154382..2154391,+ | |||
|ontology_enrichment_celltype=CL:0002541!2.94e-07!3;CL:0002537!4.45e-07!5 | |||
|ontology_enrichment_celltype_v019=CL:0000349;2.53e-31;19!CL:0002575;3.27e-14;2!CL:0002536;2.88e-13;2!CL:0002537;4.83e-12;5!CL:0002541;1.56e-09;3!CL:0002577;1.92e-09;3!CL:0000182;1.37e-08;12!CL:0000669;1.58e-07;4 | |||
|ontology_enrichment_celltype_v019_2=CL:0000349,1.37e-31,19;CL:0002575,3.50e-14,2;CL:0002536,3.48e-13,2;CL:0002537,5.03e-12,5;CL:0002541,1.04e-09,3;CL:0002577,1.40e-09,3;CL:0000182,1.10e-08,12;CL:0000669,1.64e-07,4 | |||
|ontology_enrichment_development_v019=UBERON:0004161;2.31e-09;11!UBERON:0000358;5.22e-08;1!UBERON:0009497;6.16e-08;13!UBERON:0003124;1.79e-07;1 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0005631!5.16e-20!14;UBERON:0000158!5.16e-20!14;UBERON:0000478!8.90e-17!24;UBERON:0003124!5.05e-11!7;UBERON:0000305!1.22e-10!7;UBERON:0004871!3.47e-09!8;UBERON:0000476!2.94e-07!3;UBERON:0000920!2.94e-07!3 | |||
|ontology_enrichment_uberon_v019=UBERON:0000478;1.88e-35;24!UBERON:0005631;4.68e-30;10!UBERON:0000158;4.68e-30;10!UBERON:0000305;3.04e-22;7!UBERON:0001987;9.56e-15;4!UBERON:0003124;1.56e-09;3!UBERON:0000920;1.56e-09;3!UBERON:0002426;1.79e-07;1!UBERON:0003831;1.79e-07;1!UBERON:0003898;1.79e-07;1!UBERON:0004830;1.79e-07;1!UBERON:0003830;1.79e-07;1!UBERON:0005175;1.79e-07;1!UBERON:0001774;1.79e-07;1!UBERON:0001103;1.79e-07;1 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0005631,2.44e-43,14;UBERON:0000158,2.44e-43,14;UBERON:0000478,1.05e-35,24;UBERON:0003124,8.31e-23,7;UBERON:0000305,3.65e-22,7;UBERON:0004871,2.22e-19,8;UBERON:0001987,7.05e-15,4;UBERON:0004340,7.05e-15,4;UBERON:0004923,2.37e-11,66;UBERON:0000920,1.04e-09,3;UBERON:0002426,1.30e-07,1;UBERON:0003831,1.30e-07,1;UBERON:0003898,1.30e-07,1;UBERON:0004830,1.30e-07,1;UBERON:0003830,1.30e-07,1;UBERON:0005175,1.30e-07,1;UBERON:0001774,1.30e-07,1;UBERON:0001103,1.30e-07,1;UBERON:0010084,1.30e-07,1 | |||
|phase1_expression=0.181678379270557,0,0,1.0007329835313,0,0.872338524100369,0,0,0,0,0.697801167972428,1.09220686065086,1.58260186937072,0,0,0,0,0,0,0,0.408001382488506,0.626909442956176,0,0,0.125542639594803,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.130979075497713,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.151357427644931,0.576175924479999,0,0,0,0,0,0,0,0,0,0,0,0.247266929278557,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.10366105501537,0,0,0,0,0,2.78620756819187,0.721879481669586,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.22988438543114,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.43596006883328,0,0,0,0,0.26593811658487,0,0.257207374262142,0,0,0.142977993658148,1.62786481617433,0.823240336780769,0,0,0,0,0,0,0,0,0,0,0,0,0,0.410952645100767,0,0,0,0,0,0,0,0,0,0,0,0,0,1.10422342547226,0,0,1.03985430765404,1.24900292158013,0.157702415033935,0,0,0,0,0,0,0,2.34961388955289,5.14715135716284,0,0,0,1.81876542867756,0,3.0239029332968,0,0,0,0,0,0,0,0,0,0,0,0,1.45031339509947,0,0,0,0,0.262248829918848,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.412164046590889,0,0,0,0,0,0.096670718292122,0,0,0,0,0,0.0852266274161009,1.15741646340759,0.165284915360978,0.192190067365106,0,0,0,0,0,0,0,0,0,0,0,0,0.190630193923825,0,0.855877976067841,0,0,0.359744915166629,0,0.117812402345686,0,0,0,0.48763373908959,0,0,0.136499911407986,0,0,0,0,0,0,0,0,0,0,0,0.196498082026242,0,0,0,0,0,0,0,0,0,0.941438007767792,0,0,0,0.689170200620878,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.284136146806413,2.3874448473769,1.48482340416319,2.15012491469462,0,0,0,0,0.211125408127993,0,0,0,0,0,0,0,0,0,0.0986434056369336,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.295547618953547,0,0,0,0.230850775511391,0,0.23056390438806,0,0,1.91400695839152,0.457987967009312,5.86338253620498,0,0,0,0,0,0,0,0,0,0,0.141353071433941,0,0,0,0,0,0,0,0,1.60515529459758,0,0,0,0,0,3.62972148145992,0,0.189559738885464,0,0,0,0,0,0,0,0,0,0,0,0.17472666824203,0.171986032471617,0,0,0,0,0,0.451961481561065,0,0,0,0,0,0,0.999048047910651,0,0,4.46146994441108,0,0,0,0,0.104602846312333,0,0,0,0,0,0,0,0,0,0,0,0,0,0.470284307407084,0.360299883542404,0,1.81201319306614,2.30764403467266,2.89835238572995,1.57483970423598,0,0,0,0,0,0,0,0,0,0,0,0.0524545881349981,0,0,0,0,0,0,0,0,0,0,0,0,0.113312091520126,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0620964029413835,0,0.249960815924213,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.398095888698616,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.3062454773532,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.150420656698515,0,0,0,0,0,0,0,0.206686796501184,0.0634158101939068,0,0,0.496211178389294,0,0,0,0,0,0,1.41923792260222,0,0,0.0679697329768317,0,0,0,0,0,0.280272163313789,0.913158720509496,0,0,0.428859265059938,0,0,1.56472445072321,0,0,0,0,0,0,0,0,0,0,0,0,0,0.365753774946808,0,0,0,0,0,0.795803100645473,0,0,0,0.150962843566674,0,0.437119121007915,0,0.245148321753905,0,0.588925401344836,0,0.4226557275834,0,0,0.0644578879735772,0,0,0,0,0.730336388246517,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.714193294391221,0,0,0,0,0.202117188958219,0,4.44903291410865,0,0,1.33064142618405,0,0,0,0.269475606319761,4.69281884806909,0.122241444182866,0.406896178315738,0,0,0 | |||
|short_description=p6@CU674261 | |||
}} |
Revision as of 06:09, 11 January 2014
Short description: | p6@CU674261 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_6_at_CU674261_5end |
Coexpression cluster: | C172_chorionic_skeletal_tongue_amniotic_liver_gastrointestinal_Pericytes |
Association with transcript: | 164bp_to_CU674261_5end |
EntrezGene: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
extraembryonic cell | 1.37e-31 | 19 |
central nervous system pericyte | 3.50e-14 | 2 |
amniotic epithelial cell | 3.48e-13 | 2 |
amnion mesenchymal stem cell | 5.03e-12 | 5 |
chorionic membrane mesenchymal stem cell | 1.04e-09 | 3 |
placental epithelial cell | 1.40e-09 | 3 |
hepatocyte | 1.10e-08 | 12 |
pericyte cell | 1.64e-07 | 4 |
Ontology term | p-value | n |
---|---|---|
extraembryonic membrane | 2.44e-43 | 14 |
membranous layer | 2.44e-43 | 14 |
extraembryonic structure | 1.05e-35 | 24 |
chorion | 8.31e-23 | 7 |
amnion | 3.65e-22 | 7 |
somatic layer of lateral plate mesoderm | 2.22e-19 | 8 |
placenta | 7.05e-15 | 4 |
allantois | 7.05e-15 | 4 |
organ component layer | 2.37e-11 | 66 |
egg chorion | 1.04e-09 | 3 |
chest muscle | 1.30e-07 | 1 |
respiratory system muscle | 1.30e-07 | 1 |
skeletal muscle of trunk | 1.30e-07 | 1 |
respiratory system skeletal muscle | 1.30e-07 | 1 |
thoracic segment muscle | 1.30e-07 | 1 |
chest organ | 1.30e-07 | 1 |
muscle of trunk | 1.30e-07 | 1 |
diaphragm | 1.30e-07 | 1 |
future diaphragm | 1.30e-07 | 1 |