FFCP PHASE1:Hg19::chr11:2017349..2017365,-: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene= | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_ncRNA | |||
|HGNC=4713 | |||
|TSSclassifier=strong | |||
|UniProt= | |||
|association_with_transcript=55bp_to_ENST00000442037_5end | |||
|coexpression_cluster_id=C227 | |||
|description=CAGE_peak_7_at_H19_5end | |||
|id=chr11:2017349..2017365,- | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019=CL:0000349;4.84e-15;19!CL:0002577;6.49e-07;3!CL:0002541;8.18e-07;3 | |||
|ontology_enrichment_celltype_v019_2=CL:0000349,5.11e-15,19;CL:0002577,6.51e-07,3;CL:0002541,8.28e-07,3 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0003104!2.75e-12!238;UBERON:0009142!2.75e-12!238;UBERON:0005631!9.27e-12!14;UBERON:0000158!9.27e-12!14;UBERON:0004119!1.16e-10!169;UBERON:0000925!1.16e-10!169;UBERON:0006595!1.16e-10!169;UBERON:0001737!2.90e-10!9;UBERON:0001557!5.68e-10!19;UBERON:0000481!1.06e-09!347;UBERON:0000077!1.10e-09!130;UBERON:0004921!1.25e-09!129;UBERON:0004185!1.25e-09!129;UBERON:0004923!1.92e-09!57;UBERON:0001041!3.20e-09!98;UBERON:0003124!4.44e-09!7;UBERON:0000478!1.11e-08!24;UBERON:0001007!2.13e-08!155;UBERON:0001555!2.13e-08!155;UBERON:0007026!2.13e-08!155;UBERON:0002417!3.54e-08!61;UBERON:0000916!3.54e-08!61;UBERON:0009569!4.24e-08!113;UBERON:0002100!5.46e-08!216;UBERON:0000468!3.34e-07!659;UBERON:0000064!9.40e-07!219 | |||
|ontology_enrichment_uberon_v019=UBERON:0001737;1.52e-15;9!UBERON:0001557;1.52e-15;9!UBERON:0000478;4.10e-15;24!UBERON:0001134;1.66e-14;16!UBERON:0002036;1.66e-14;16!UBERON:0005631;4.77e-12;10!UBERON:0000158;4.77e-12;10!UBERON:0003688;9.39e-09;6!UBERON:0002358;9.39e-09;6!UBERON:0003684;9.39e-09;6!UBERON:0001178;9.39e-09;6!UBERON:0001987;1.77e-08;4!UBERON:0000305;3.13e-07;7!UBERON:0003124;8.18e-07;3!UBERON:0000920;8.18e-07;3 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0005631,1.21e-18,14;UBERON:0000158,1.21e-18,14;UBERON:0001737,1.54e-15,9;UBERON:0000478,4.25e-15,24;UBERON:0003124,1.23e-13,7;UBERON:0001557,1.41e-11,19;UBERON:0001041,9.39e-10,87;UBERON:0003688,9.86e-09,6;UBERON:0002358,9.86e-09,6;UBERON:0003684,9.86e-09,6;UBERON:0001178,9.86e-09,6;UBERON:0004921,1.11e-08,118;UBERON:0001987,1.74e-08,4;UBERON:0004340,1.74e-08,4;UBERON:0004119,4.75e-08,160;UBERON:0000925,4.75e-08,160;UBERON:0006595,4.75e-08,160;UBERON:0000305,3.14e-07,7;UBERON:0009569,5.14e-07,112;UBERON:0002100,6.44e-07,199;UBERON:0005256,6.64e-07,122;UBERON:0000920,8.28e-07,3 | |||
|phase1_expression=9.99231085988061,2.14100523890983,1.26858963686374,2.00146596706261,1.78784437770915,22.6808016266096,0,0,0,0.982935746006035,2.09340350391728,32.7662058195258,40.3563476689534,0.247532705920093,0.994192127183747,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.54816123316076,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.670700859703636,0.383587685530591,0,0,0,0,3.40644409211845,0,0,0.087834785693126,0,0.728590576585084,0.741568885568859,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.33472061276467,0,0,0,0,0,0,0,0,0,0,0,0,0,0.872188104285069,0,0,0,0,0,2.80338800071154,0,0,0.933633106199299,0,0,1.05950199351452,12.67587033856,0.937285727335186,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.125118519871964,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.121973706129595,0.132529768321485,1.51052125730374,1.14027160516907,0.252320850875628,0,0,0,0,0,0,13.605282004582,9.946496714608,15.1836948826594,11.9117490550985,10.4582133164355,9.01628352622167,12.1348177344148,14.9128313495263,12.3119090222845,2.21446636387394,4.20725321410337,1.6462960453256,27.931655163253,1.26755034821831,1.96565443335525,1.77236972004421,0,0,0,0,0,0,5.18495292887766,0,0,0,0.115930404975077,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.07333828582095,0,0,0,0,0,0,0,0,1.71573592389777,200.227372389442,0,0,0.355391948742546,3.16780749173372,0,0,0,0,0,0,0,0,0,3.90909528002464,5.54786070886035,5.90901178691655,0,0,0,0,0.254094624222463,0,0,0.167516265334349,0,0,0,0,2.82190430954022,1.00034104211935,0.271265023699736,0,0,0,0,0.601892199455438,0,1.03473071292505,0,0.368738337083406,0,20.363320376125,36.0300595001399,0,0,0,64.8693002894995,252.981868055956,39.3107381328584,10.1724201205699,0.306923946576125,8.13914273855913,3.84417447767103,3.07024349440022,2.2519548960105,10.3892646511494,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.27466768141793,0.170093705276516,0.647747748306418,9.25363516141736,0,1.00337954770971,0,0,0,0,0,0,0,0.325378394664303,0.9273691048295,0,0,0,0,0,1.93341436584244,0.770243085573222,1.99554777143968,1.65403886981437,0.966782203814463,2.17525040871343,1.70453254832202,12.2864209192498,0.165284915360978,0.192190067365106,0,0.10115778085555,0,0,0,0,0,0,0,0,1.116475108079,0.632758849437452,0.762520775695299,0.767693373934002,34.6630580307476,0,0,0.179872457583315,0,0,0,0,0,1.46290121726877,0,0,0,0,0,0,0,0,1.73632660280006,3.27947376023316,0,0,0,0.143411352204052,1.96498082026242,0,0,0,0.987884678879706,0.75894634753143,1.74967360122491,0,0,0,1.7887322147588,0,0,0.886860307073351,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.73254089635947,0,0,0,123.908387578861,70.0836646765027,297.024398929957,0,0,0,0,0.211125408127993,0.597743964753209,0.276283915531148,4.28285671352269,0,0,0,0,0,0,1.08507746200627,0,0,0,0,0,0,0,0.724999575434793,0.1137934482855,0,2.83665218121524,0,0,0,0,0,0,0,0,0,0,0,1.23120413606075,0,0.46112780877612,19.297893548101,9.12637924144868,78.4742852940522,13.0068582630644,291.570022482193,0,0,0,0.902382642468723,0,0,0,0,0,0,0,0,0,0.353830258013357,1.22206028986725,0,0,0,0,77.0474541406837,0,0,0,0,0.394584402849391,6.04953580243319,0,0.063186579628488,0,0,0,0,0,0,0,0,0,0,0,1.7472666824203,0,0,0,0.0821154570532092,0.775912131907355,0,3.84167259326905,0,0,0,0.586654148204409,0,0,96.5080414281689,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.837847203816763,0.229160424011684,0.717873024576814,0.399358000997982,0.858452096273142,0.446342914883745,2.35142153703542,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.157611414598396,2.09818352539992,0,0,0,1.42939065274673,1.98627591109629,0.25426853765475,0,0,0,0,0,0,0,1.46552233678082,42.4022044519108,0,0,0,0,0.106787412567695,1.57204305099666,0,0,0,0,0,0,0.5013797880454,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.50313580350515,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,36.0024988196838,0.686791410365586,0.336749488765919,0,0,0.214441591374926,1.04397716786085,0,0,0,0,0.308801447160972,0,0,0.192914038270915,0,0,0.345430341731199,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.97661808026378,0,5.82253981542082,0,1.74735421107222,0,0,0.123935764259002,0,0,0,0,0.352675943690684,0,0,0,0,0,0,0,0,0,0,0.825788063434183,0.733714394086716,21.3722482378126,0,0,0,0.526472298444801,0,0.781514011233092,17.2858418357739,0,0.739280431085226,0,0,0,0,0,0,3.96968942711435,0,0.255524855279191,0,0,0,0,12.3296294526068,0,0.857440047187092,0,0.0657727735628491,0,0,0.39246546425257,0,5.0448989396482,8.21842848458546,0,0,0.285906176706625,0,0,0,0,0,0.17071847709395,1.38251932362818,0,0,0,0.423387050190929,5.9567785821453,0,0,0,0,0,7.12171720906684,3.59319823996865,16.2374020387348,14.085618798715,0,0,0,0,0,0,0.0771741581079447,3.49695296806332,0,0.245148321753905,0.471353094203252,0,0,2.113278637917,0,0.187967835959707,0.902410431630081,0,1.07132363163395,0,0,2.92134555298607,0.458729283404541,0,0.473314686579554,0,0,10.580536810308,0.743990036333503,1.38652688589425,8.219904680351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| |||
|short_description=p7@H19 | |||
}} |
Revision as of 06:07, 11 January 2014
Short description: | p7@H19 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_7_at_H19_5end |
Coexpression cluster: | C227_chorionic_amniotic_Mesenchymal_Placental_gastric_diaphragm_tongue |
Association with transcript: | 55bp_to_ENST00000442037_5end |
EntrezGene: | NA |
HGNC: | 4713 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
extraembryonic cell | 5.11e-15 | 19 |
placental epithelial cell | 6.51e-07 | 3 |
chorionic membrane mesenchymal stem cell | 8.28e-07 | 3 |
Ontology term | p-value | n |
---|---|---|
extraembryonic membrane | 1.21e-18 | 14 |
membranous layer | 1.21e-18 | 14 |
larynx | 1.54e-15 | 9 |
extraembryonic structure | 4.25e-15 | 24 |
chorion | 1.23e-13 | 7 |
upper respiratory tract | 1.41e-11 | 19 |
foregut | 9.39e-10 | 87 |
omentum | 9.86e-09 | 6 |
peritoneum | 9.86e-09 | 6 |
abdominal cavity | 9.86e-09 | 6 |
visceral peritoneum | 9.86e-09 | 6 |
subdivision of digestive tract | 1.11e-08 | 118 |
placenta | 1.74e-08 | 4 |
allantois | 1.74e-08 | 4 |
endoderm-derived structure | 4.75e-08 | 160 |
endoderm | 4.75e-08 | 160 |
presumptive endoderm | 4.75e-08 | 160 |
amnion | 3.14e-07 | 7 |
subdivision of trunk | 5.14e-07 | 112 |
trunk | 6.44e-07 | 199 |
trunk mesenchyme | 6.64e-07 | 122 |
egg chorion | 8.28e-07 | 3 |