FFCP PHASE1:Hg19::chr11:13030853..13030875,+: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=644943 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_ncRNA | |||
|HGNC=33984 | |||
|TSSclassifier=strong | |||
|UniProt=A6NK89 | |||
|association_with_transcript=-94bp_to_NM_001080521_5end | |||
|description=CAGE_peak_1_at_RASSF10_5end | |||
|id=chr11:13030853..13030875,+ | |||
|ontology_enrichment_celltype=CL:0000066!6.61e-13!254;CL:0002076!1.68e-10!43;CL:0000223!1.55e-08!59;CL:0002368!8.36e-08!13 | |||
|ontology_enrichment_celltype_v019=CL:1000507;9.16e-12;10!CL:1000494;9.16e-12;10!CL:0002076;1.62e-10;42!CL:1000497;8.05e-08;17!CL:0002518;8.05e-08;17!CL:1000449;2.56e-07;15!CL:0002621;3.23e-07;3 | |||
|ontology_enrichment_celltype_v019_2=CL:0000066,1.45e-14,253;CL:0002076,4.81e-12,42;CL:1000507,6.70e-12,10;CL:1000494,6.70e-12,10;CL:0000223,8.26e-12,58;CL:1000497,6.29e-08,17;CL:0002518,6.29e-08,17;CL:1000449,2.11e-07,15;CL:0002621,2.81e-07,3 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000153!2.77e-13!129;UBERON:0007811!2.77e-13!129;UBERON:0000033!1.52e-12!123;UBERON:0004121!1.23e-11!169;UBERON:0000922!1.71e-11!612;UBERON:0000481!2.32e-11!347;UBERON:0005743!5.51e-11!86;UBERON:0007023!6.07e-11!115;UBERON:0004111!7.29e-11!241;UBERON:0000924!8.24e-11!173;UBERON:0006601!8.24e-11!173;UBERON:0000483!2.12e-10!309;UBERON:0001017!2.20e-10!82;UBERON:0000119!3.03e-10!312;UBERON:0000477!3.58e-10!286;UBERON:0000064!4.53e-10!219;UBERON:0000475!7.97e-10!365;UBERON:0003075!9.18e-10!86;UBERON:0007284!9.18e-10!86;UBERON:0000468!1.25e-09!659;UBERON:0000467!1.91e-09!625;UBERON:0000062!1.92e-09!511;UBERON:0002050!2.19e-09!605;UBERON:0005423!2.19e-09!605;UBERON:0000480!2.47e-09!626;UBERON:0001049!3.59e-09!57;UBERON:0005068!3.59e-09!57;UBERON:0006241!3.59e-09!57;UBERON:0007135!3.59e-09!57;UBERON:0004119!4.02e-09!169;UBERON:0000925!4.02e-09!169;UBERON:0006595!4.02e-09!169;UBERON:0000923!4.36e-09!604;UBERON:0005291!4.36e-09!604;UBERON:0006598!4.36e-09!604;UBERON:0002532!4.36e-09!604;UBERON:0006554!8.48e-09!44;UBERON:0002346!1.10e-08!90;UBERON:0000464!1.45e-08!104;UBERON:0000073!1.61e-08!94;UBERON:0001016!1.61e-08!94;UBERON:0003056!1.86e-08!61;UBERON:0000489!1.95e-08!32;UBERON:0001008!2.15e-08!45;UBERON:0000025!4.30e-08!194;UBERON:0002616!6.30e-08!59;UBERON:0000466!9.88e-08!126;UBERON:0005177!1.63e-07!107;UBERON:0000955!2.33e-07!69;UBERON:0006238!2.33e-07!69;UBERON:0003080!2.62e-07!42;UBERON:0001007!2.88e-07!155;UBERON:0001555!2.88e-07!155;UBERON:0007026!2.88e-07!155;UBERON:0001004!3.07e-07!72;UBERON:0005911!3.63e-07!82;UBERON:0002780!7.72e-07!41;UBERON:0001890!7.72e-07!41;UBERON:0006240!7.72e-07!41;UBERON:0003103!9.30e-07!69;UBERON:0000956!9.54e-07!25;UBERON:0000203!9.54e-07!25 | |||
|ontology_enrichment_uberon_v019=UBERON:0004211;9.16e-12;10!UBERON:0009773;9.16e-12;10!UBERON:0001231;9.16e-12;10!UBERON:0004810;9.16e-12;10!UBERON:0006554;3.71e-11;30!UBERON:0001008;3.71e-11;30!UBERON:0000486;8.55e-10;12!UBERON:0005911;1.11e-08;36!UBERON:0000489;1.39e-08;29!UBERON:0000165;5.61e-08;28!UBERON:0002113;1.08e-07;24!UBERON:0011143;1.08e-07;24!UBERON:0000161;2.52e-07;19!UBERON:0000166;2.52e-07;19!UBERON:0006555;2.56e-07;15!UBERON:0004819;2.56e-07;15!UBERON:0001285;2.56e-07;15!UBERON:0007684;2.56e-07;15!UBERON:0001949;3.23e-07;3 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0004119,1.72e-12,160;UBERON:0000925,1.72e-12,160;UBERON:0006595,1.72e-12,160;UBERON:0004810,6.70e-12,10;UBERON:0005177,3.85e-10,101;UBERON:0001007,6.78e-10,145;UBERON:0001555,6.78e-10,145;UBERON:0007026,6.78e-10,145;UBERON:0001004,2.59e-09,74;UBERON:0000166,2.94e-09,22;UBERON:0000489,5.64e-08,31;UBERON:0006554,6.93e-08,47;UBERON:0000161,9.14e-08,36;UBERON:0004921,1.10e-07,118;UBERON:0001008,1.23e-07,48;UBERON:0000165,1.40e-07,29;UBERON:0000930,1.40e-07,29;UBERON:0004211,2.11e-07,15;UBERON:0009773,2.11e-07,15;UBERON:0001231,2.11e-07,15;UBERON:0001285,2.11e-07,15;UBERON:0007684,2.11e-07,15;UBERON:0004208,2.11e-07,15;UBERON:0005911,2.18e-07,82;UBERON:0001949,2.81e-07,3;UBERON:0002113,4.90e-07,26;UBERON:0003918,4.90e-07,26;UBERON:0011143,4.90e-07,26;UBERON:0005095,4.90e-07,26;UBERON:0007687,4.90e-07,26;UBERON:0001041,5.94e-07,87;UBERON:0009569,6.35e-07,112;UBERON:0006555,7.62e-07,16;UBERON:0004819,7.62e-07,16 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0.245733936501509,0.697801167972428,0.655324116390517,0,0,0,0,0,0,0,0.61560529038394,0.204000691244253,0.626909442956176,2.57612388417951,1.64249310087461,0.376627918784408,0.152826811495903,0.164201178899891,0.314843125254717,0,0,0.154816123316076,2.75826367343678,3.31326510656075,1.84877005083394,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.189069634328136,0.665188192387692,1.49319135678314,1.37528029272598,1.09288586487763,0.370784442784429,0,0,0,0,0,0,0,0,0,0.56530794192401,0.419499436209906,0.275118041940067,0,0,0,0,0,0,0.24406205754817,0,0,0,0,0.112611480483322,0,0,0,0,0,2.18047026071267,0,0,0,0,0,0,0,0.98667019366864,0,0.134710672069688,0,1.21085942115945,0.576175924479999,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.300476117813194,0,0,0,0,0,0,0,0,0,0,0,0,0,0.355009592516614,0,0,5.60456474173561,2.72746120590835,4.30206893083506,0.365921118388786,0.927708378250397,1.2781333715647,1.0366105501537,1.51392510525377,1.45990943630332,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.40241773803446,0,0,0,0,0,0,3.19769940212095,0.857839051492628,0.439001141634502,0,0.603173834469785,1.38882667737794,0,0,1.44331342025273,0.579652024875384,0,0.144366447761074,0,0.951270761172991,0,0,0,0,0,1.87467667973554,0.671928512795438,2.83550194484773,0.0895585227028483,1.16253575405585,0,0,0,0,0.144119953416961,0.25248486685276,0,0,0,0,0,0,0,0,0,0.07333828582095,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.01637849688985,0,0,0.335032530668698,0.637938751653163,0,0,0,0,0,0,0,0,0,0,0,0,0,0.664225598535437,0.184369168541703,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.32945394550784,3.00759705454927,0.460404944679482,0,0,0,1.35359883872224,0.385076685522074,2.35304930753057,5.84556898613043,1.89992932007176,0,0,0.215915916102139,0,5.1479823133332,4.01351819083883,0.254876273045038,1.66215201785745,3.1342465661105,0,0,0.256450125116389,0.984043937099117,0,0.515205058238611,0.54941678891006,0.41254749960294,0.574265537996172,1.30012049207304,0,0,0,0,0,0,0,0.0852266274161009,0,0.826424576804891,2.11409074101617,3.1903178123646,1.4162089319777,0,0,0,0.308033580176089,0,0,0.18532421910392,0.143124886741991,0,0,0,0,0,0,0.78494864019923,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.35667105148125,0,0,0,0,0,0.769776901804097,3.35151137767894,0,0.376575203107117,2.58303223602738,3.36942951335251,2.66058092122005,0.229723400206959,0,0,0,0,0,0,0,0,0,0,0.980160863924127,0,0.577076851905779,0,0,0,0,0,0,0,0,0,2.50634477090067,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.293016358543788,0,0,0.284136146806413,0.23874448473769,0,0,0,0.281338832821026,0.111308705022906,0,0,1.59398390600856,0.276283915531148,1.0077309914171,0,0,0,2.15684042753584,0.179021174675609,0,0.0986434056369336,0,0,0.969332746095218,0.463840490809256,0,0.260427761085233,0,1.44999915086959,2.61724931056649,0.762760950878299,4.01859059005492,0,0,0.347249989866585,0,0,0,0,0,0.87754158861589,0,5.43752602686553,0.538651809526579,0,0,0,0,0,0.183195186803725,0,0,0,0,0,0,0,0,0,0,1.63232808159148,0,0.216388639742091,0,0.796118080530053,0,6.52346483097368,3.83048210734159,3.65476823269094,0.606610196826093,0.802577647298789,0.702793337176017,0,1.56531695145672,0,0,2.41981432097328,0.30607276163049,0.189559738885464,0.150323419414493,0.103688191397247,0,0,0,0,2.27687636823834,0,0.520679215005393,1.86185555087318,0,0.698906672968121,0,0,0,0,4.46149475846729,0,0.451961481561065,0.274083849293502,0,0.443175571691151,1.36885967914362,0.0801588202515337,1.06726497369676,0,0,0,6.00582492516876,0,0,20.0339929424276,0,0,0,0,0,0.273810757783986,0,0,14.195917131083,0.558564802544508,0.458320848023367,0,0,0.429226048136571,0.223171457441873,0.604651252380536,0,6.98975697164723,0,0,0,0,0,0,0.681017030557878,0.321506296930038,0.962776056180637,2.07720169014593,0.449947783103001,1.5476039091159,0.668245123238271,0.335434687599266,1.65491985328316,7.08136939822474,0,0,2.87872795979168,0,0,0,0,0,0,0,0,0,0,0,1.32506888912221,0,0.13223260174269,0.342173675768659,0,0.640724475406168,1.25763444079733,0.828478110694391,0,0,0,0.638341257770182,0,2.0055191521816,0,0,0,0,0.122026264901963,0.3755727921195,0.573409195690071,0.443716206147409,0.558867626472451,0.276697269872462,8.24870692549904,0,0,0,0,1.01444720027578,0,0,0,0,0,0,0,0,0,0.443565449968902,0.159296767163702,0,0,0,0,0,0,0,0.406870733204662,0,0.429642228169954,0,0,0,0,0,0,0,0,0,0,0.231522474323834,0,0,0,0,0,0,0,0.512483037175893,0,0,0.276516872303462,0.194860308839388,0.265729680626726,0.163565394255844,0,0,0.633936370075881,1.39991177098451,0,0,0,0,0.699397538597222,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.513833800771676,0,0.319267718114302,1.02558182120378,0.252071696221718,0.276629009856872,0.484426936895553,0,0.196295437002051,1.1796972334774,7.52057253938884,0.808679663052368,0,0,0,0.752103283492572,0,0,0,0.163771917510097,18.1862986046966,0,0.781078098613847,0,0.4439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| |||
|short_description=p1@RASSF10 | |||
}} |
Revision as of 06:41, 11 January 2014
Short description: | p1@RASSF10 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_RASSF10_5end |
Coexpression cluster: | NA |
Association with transcript: | -94bp_to_NM_001080521_5end |
EntrezGene: | RASSF10 |
HGNC: | 33984 |
UniProt: | A6NK89 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
epithelial cell | 1.45e-14 | 253 |
endo-epithelial cell | 4.81e-12 | 42 |
kidney tubule cell | 6.70e-12 | 10 |
nephron tubule epithelial cell | 6.70e-12 | 10 |
endodermal cell | 8.26e-12 | 58 |
kidney cell | 6.29e-08 | 17 |
kidney epithelial cell | 6.29e-08 | 17 |
epithelial cell of nephron | 2.11e-07 | 15 |
gingival epithelial cell | 2.81e-07 | 3 |
Ontology term | p-value | n |
---|---|---|
endoderm-derived structure | 1.72e-12 | 160 |
endoderm | 1.72e-12 | 160 |
presumptive endoderm | 1.72e-12 | 160 |
nephron tubule epithelium | 6.70e-12 | 10 |
trunk region element | 3.85e-10 | 101 |
digestive system | 6.78e-10 | 145 |
digestive tract | 6.78e-10 | 145 |
primitive gut | 6.78e-10 | 145 |
respiratory system | 2.59e-09 | 74 |
oral opening | 2.94e-09 | 22 |
cavitated compound organ | 5.64e-08 | 31 |
urinary system structure | 6.93e-08 | 47 |
orifice | 9.14e-08 | 36 |
subdivision of digestive tract | 1.10e-07 | 118 |
renal system | 1.23e-07 | 48 |
mouth | 1.40e-07 | 29 |
stomodeum | 1.40e-07 | 29 |
nephron epithelium | 2.11e-07 | 15 |
renal tubule | 2.11e-07 | 15 |
nephron tubule | 2.11e-07 | 15 |
nephron | 2.11e-07 | 15 |
uriniferous tubule | 2.11e-07 | 15 |
nephrogenic mesenchyme | 2.11e-07 | 15 |
endo-epithelium | 2.18e-07 | 82 |
gingival epithelium | 2.81e-07 | 3 |
kidney | 4.90e-07 | 26 |
kidney mesenchyme | 4.90e-07 | 26 |
upper urinary tract | 4.90e-07 | 26 |
kidney rudiment | 4.90e-07 | 26 |
kidney field | 4.90e-07 | 26 |
foregut | 5.94e-07 | 87 |
subdivision of trunk | 6.35e-07 | 112 |
excretory tube | 7.62e-07 | 16 |
kidney epithelium | 7.62e-07 | 16 |