FFCP PHASE1:Hg19::chr11:105481612..105481624,+: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=2893 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=4574 | |||
|TSSclassifier=strong | |||
|UniProt=E9PQY1 | |||
|association_with_transcript=-9bp_to_ENST00000531011_5end | |||
|coexpression_cluster_id=C3 | |||
|description=CAGE_peak_2_at_GRIA4_5end | |||
|id=chr11:105481612..105481624,+ | |||
|ontology_enrichment_celltype=CL:0000540!1.89e-07!6;CL:0000031!1.89e-07!6;CL:0000404!1.89e-07!6;CL:0000047!2.11e-07!8 | |||
|ontology_enrichment_celltype_v019=CL:0000540;2.96e-08;6!CL:0000404;2.96e-08;6!CL:0000064;6.77e-07;3!CL:0000067;6.77e-07;3!CL:0005012;6.77e-07;3!CL:0002304;6.77e-07;3 | |||
|ontology_enrichment_celltype_v019_2=CL:0000047,8.57e-09,8;CL:0000540,3.22e-08,6;CL:0000031,3.22e-08,6;CL:0000404,3.22e-08,6;CL:0000064,6.63e-07,3;CL:0000067,6.63e-07,3;CL:0005012,6.63e-07,3;CL:0002304,6.63e-07,3 | |||
|ontology_enrichment_development_v019=UBERON:0006601;7.85e-22;82!UBERON:0006215;1.01e-08;3!CL:0000031;2.96e-08;6!UBERON:0006241;9.93e-08;3!UBERON:0003057;9.93e-08;3 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
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|ontology_enrichment_uberon_v019=UBERON:0001893;1.75e-52;34!UBERON:0003528;2.44e-52;34!UBERON:0002020;2.44e-52;34!UBERON:0001869;6.32e-52;32!UBERON:0002791;1.17e-51;32!UBERON:0002780;5.34e-51;41!UBERON:0001890;5.34e-51;41!UBERON:0002619;1.15e-50;22!UBERON:0000073;4.45e-48;53!UBERON:0002616;4.45e-48;53!UBERON:0001950;8.20e-47;20!UBERON:0000956;5.72e-44;25!UBERON:0000203;5.72e-44;25!UBERON:0001017;3.06e-33;75!UBERON:0000955;6.44e-32;68!UBERON:0001016;4.22e-30;83!UBERON:0002420;2.30e-19;9!UBERON:0007245;2.30e-19;9!UBERON:0010009;2.30e-19;9!UBERON:0010011;2.30e-19;9!UBERON:0000454;2.30e-19;9!UBERON:0000125;2.35e-19;9!UBERON:0002308;2.35e-19;9!UBERON:0004732;1.62e-17;13!UBERON:0001871;3.15e-16;6!UBERON:0004733;1.08e-15;12!UBERON:0002028;1.08e-15;12!UBERON:0009663;5.73e-15;7!UBERON:0000200;6.16e-15;6!UBERON:0002298;1.24e-14;6!UBERON:0007023;6.25e-14;114!UBERON:0001872;1.45e-12;5!UBERON:0002021;3.46e-12;5!UBERON:0000349;4.83e-12;5!UBERON:0011216;1.24e-11;132!UBERON:0001894;1.37e-10;7!UBERON:0010314;2.72e-10;132!UBERON:0002680;5.75e-10;9!UBERON:0001895;5.75e-10;9!UBERON:0000369;1.77e-09;4!UBERON:0002435;1.77e-09;4!UBERON:0000204;1.77e-09;4!UBERON:0000488;1.76e-08;4!UBERON:0000988;2.05e-08;3!UBERON:0001870;2.39e-08;3!UBERON:0007625;2.86e-08;11!UBERON:0002104;4.86e-08;21!UBERON:0001896;6.72e-08;3!UBERON:0005290;6.72e-08;3!UBERON:0002240;9.93e-08;3!UBERON:0005174;9.93e-08;3!UBERON:0001137;9.93e-08;3!UBERON:0005383;2.66e-07;3!UBERON:0005382;2.66e-07;3!UBERON:0001778;6.77e-07;3!UBERON:0001775;6.77e-07;3!UBERON:0000970;7.85e-07;20!UBERON:0001032;8.57e-07;24!UBERON:0004456;8.57e-07;24!UBERON:0004121;9.23e-07;165 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001049,7.29e-93,56;UBERON:0005068,7.29e-93,56;UBERON:0006241,7.29e-93,56;UBERON:0007135,7.29e-93,56;UBERON:0001016,9.54e-90,89;UBERON:0001017,2.55e-88,81;UBERON:0003075,4.00e-87,82;UBERON:0007284,4.00e-87,82;UBERON:0000073,2.38e-86,53;UBERON:0002616,2.38e-86,53;UBERON:0002346,2.47e-82,86;UBERON:0000955,5.29e-73,68;UBERON:0006238,5.29e-73,68;UBERON:0002780,2.61e-71,41;UBERON:0001890,2.61e-71,41;UBERON:0003080,2.61e-71,41;UBERON:0006240,2.61e-71,41;UBERON:0010371,4.24e-70,104;UBERON:0003056,5.14e-70,61;UBERON:0003528,4.35e-62,34;UBERON:0002020,4.35e-62,34;UBERON:0001893,5.48e-62,34;UBERON:0001869,7.32e-58,32;UBERON:0002791,1.46e-57,32;UBERON:0004121,2.86e-57,171;UBERON:0000924,2.86e-57,171;UBERON:0006601,2.86e-57,171;UBERON:0010314,7.86e-52,132;UBERON:0002619,1.34e-50,22;UBERON:0001950,9.81e-47,20;UBERON:0000956,6.55e-44,25;UBERON:0000203,6.55e-44,25;UBERON:0007023,5.93e-41,114;UBERON:0011216,5.44e-33,223;UBERON:0003076,1.51e-21,15;UBERON:0003057,1.51e-21,15;UBERON:0000125,2.49e-19,9;UBERON:0002308,2.49e-19,9;UBERON:0002420,2.54e-19,9;UBERON:0007245,2.54e-19,9;UBERON:0010009,2.54e-19,9;UBERON:0010011,2.54e-19,9;UBERON:0000454,2.54e-19,9;UBERON:0000025,4.64e-19,192;UBERON:0004732,1.56e-17,13;UBERON:0001871,3.87e-16,6;UBERON:0000483,7.15e-16,306;UBERON:0004733,1.05e-15,12;UBERON:0002028,1.05e-15,12;UBERON:0007277,1.05e-15,12;UBERON:0000119,1.48e-15,309;UBERON:0009663,6.13e-15,7;UBERON:0000200,6.39e-15,6;UBERON:0002298,1.20e-14,6;UBERON:0004111,3.19e-13,240;UBERON:0001872,1.52e-12,5;UBERON:0002021,3.20e-12,5;UBERON:0000349,4.95e-12,5;UBERON:0001894,1.47e-10,7;UBERON:0006222,1.47e-10,7;UBERON:0002680,5.67e-10,9;UBERON:0001895,5.67e-10,9;UBERON:0010092,5.67e-10,9;UBERON:0000369,1.83e-09,4;UBERON:0002435,1.83e-09,4;UBERON:0000204,1.83e-09,4;UBERON:0010082,1.83e-09,4;UBERON:0000923,4.57e-09,560;UBERON:0010316,4.57e-09,560;UBERON:0005291,4.57e-09,560;UBERON:0006598,4.57e-09,560;UBERON:0010317,4.57e-09,560;UBERON:0002532,4.57e-09,560;UBERON:0002050,7.31e-09,564;UBERON:0000922,1.43e-08,592;UBERON:0000488,1.43e-08,4;UBERON:0000988,2.02e-08,3;UBERON:0001870,2.39e-08,3;UBERON:0007625,2.47e-08,11;UBERON:0000970,4.37e-08,21;UBERON:0002104,4.37e-08,21;UBERON:0005423,4.97e-08,581;UBERON:0001896,6.57e-08,3;UBERON:0005290,6.57e-08,3;UBERON:0010096,6.57e-08,3;UBERON:0002240,8.86e-08,3;UBERON:0005174,8.86e-08,3;UBERON:0001137,8.86e-08,3;UBERON:0005383,2.73e-07,3;UBERON:0005382,2.73e-07,3;UBERON:0001778,6.63e-07,3;UBERON:0001775,6.63e-07,3;UBERON:0000019,7.05e-07,20;UBERON:0000047,7.05e-07,20;UBERON:0010312,7.05e-07,20;UBERON:0004088,7.05e-07,20;UBERON:0010230,7.05e-07,20;UBERON:0003072,7.05e-07,20;UBERON:0004128,7.05e-07,20;UBERON:0003071,7.05e-07,20;UBERON:0000020,7.83e-07,24;UBERON:0001032,7.83e-07,24;UBERON:0004456,7.83e-07,24 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0.247532705920093,0.331397375727916,0,0,0,0,0.123121058076788,0,0,0.286235987131057,0.136874425072884,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.217010870715852,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.605399502633369,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.473447805734733,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.486634870302636,5.19941494402373,3.54767035940102,2.72287835648691,2.5540919722054,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.352303495931295,0.323745888736263,0.280901613404497,0,0.122834317311768,0,0,0.247266929278557,0,0,0,0,0,0,0,0,0,0.179389635688862,0,0,0,0,0,0,0,0,0.252433774244115,0,0,0,0,0,0,0,0,0.243947412259191,0,1.04574548582567,0.414644220061482,0.252320850875628,0.36497735907583,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.88724591328378,0,0,0,0,0,0,1.44331342025273,6.95582429850461,2.34817388471643,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.12624243342638,0.126995788584338,0,0,0,0,0,0,0,0,0,0,0,0,0.26593811658487,0,0,0,0,0,0,0,0,0,0,0.602878754119172,0,0,0,0,0,0,0,0,0,0.61642896765115,0,0,0,0,0,11.9424473384558,0,1.54657762555539,1.00509759200609,3.18969375826582,0,0,0,0.12269149171914,0.500170521059677,0,0,0,0,0,0,0,0,0,0,0.0868836144680828,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.131124414959424,0,0,0,0,0.105551628892876,0,0,0,0,0,0,0,0,0,0,0,0,0.328014645699706,0,0.103041011647722,0.183138929636687,0.165018999841176,0,0,0,0.096670718292122,0,0,0,0,0,0,0.178064071293475,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.274537029736055,0,0,0,0,0.48763373908959,0,0,1.36499911407986,0.141405431953713,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,28.8302817852226,15.6143052215669,0,0,0,0.19924798825107,0.552567831062295,0,0,0,0,0,0,0,0,0,0,9.69332746095218,25.5112269945091,17.9652418201075,0,0,0,0,0,0,6.55012409158783,0.874813840149763,0,7.08593108651071,6.15041836989581,28.9905299002458,71.6553604354336,34.5790714175651,20.4028419353194,0,0,0.230850775511391,0,0,0,0,0,1.19076871422421,0,0,0,0,0,0,0,0,0,0,0,0,0,0.995261931078505,0.265372693510018,1.83309043480088,0.593042257361244,1.35920332841153,1.14864144456001,12.4018084684446,0,9.60484227473891,0,0,0,0,1.20990716048664,10.1004011338062,0.379119477770928,0.150323419414493,0,0,0,0,0,0,0,0,0,0,0.17472666824203,0,0,0,0,0,11.5615525965865,8.3612874088797,0,0,32.6050599172775,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.60252173225874,5.61312053457172,0,0,0,0,0.458320848023367,1.43574604915363,0,0,0,0,0,0,0,0,0,0,0,4.77137813885582,10.2152554583682,0.964518890790115,2.61324929534744,3.73896304226267,0,0.77380195455795,31.954266802121,0,0.0788057072991982,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,25.9858742286717,16.2646100143509,0,0,0,0.157204305099666,0,0,0,0,0,0,0,0,0,0,19.4934999592737,39.0484047686282,17.025966576084,9.17454713104114,13.533344287496,20.5539093735979,0.138348634936231,0,0.758245587708239,0,0,3.27834434064817,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.300515217994437,0,0,0,0.107410557042488,0,0.398095888698616,0,0,0,0,0,0,0,0,0,0,0.179088841081487,0,0,0,0,0,0,0,0,11.1989333282902,0,0,0.163565394255844,0,0,0,0,0,0,0,0.368211900503681,0,0,4.85998610953876,2.47997066212368,0.157265941855896,4.6960144422566,0,0,0.123935764259002,0,0,0,0,0,4.2874366829448,19.4614552042272,14.1696576325585,15.6441181876008,20.5116364240755,7.81422258287326,20.954647496658,14.048381169971,8.56616521554926,0,0,0,0,0,1.3807198521202,1.5913297769302,0.0752103283492573,0,0,0,0,0,22.2198653394518,14.8404838736631,23.562294801135,20.1028118314685,11.4864709893826,0,0,0.879356221798103,0,0.535701835878287,1.00885116665647,1.82089681270989,4.55324382702595,0.0887023701626388,0.230467975111559,0,30.7902890385048,26.9010643872053,0,0,0,8.64135744538011,0,0,0,0,4.78892845983597,0,6.85824409671939,0,0.801711364730253,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.102662806856247,0,1.45713297917742,0,0,1.66488127088596,0,0.329821550236287,0,0.540219106755613,0.218559560503957,0,0,0,15.7046773691956,9.80253121079384,10.9890489171684,0,0,0,0,0,0,0,0,0,9.03039373854143,0,20.3974470572744,3.9271562130634,0,0,0,0,0,0,0,0,0,0,0,0,0,9.12086383404657,10.1364335944657,0,0.476128862927481,0,0,1.12131862580613,0,0,0,0,0.0673520530145875,0,0.99798106963804,0,0,0,0,0,0.122241444182866,0.406896178315738,0,0,0 | |||
|short_description=p2@GRIA4 | |||
}} |
Revision as of 10:08, 11 January 2014
Short description: | p2@GRIA4 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_2_at_GRIA4_5end |
Coexpression cluster: | C3_occipital_temporal_insula_medial_postcentral_frontal_amygdala |
Association with transcript: | -9bp_to_ENST00000531011_5end |
EntrezGene: | GRIA4 |
HGNC: | 4574 |
UniProt: | E9PQY1 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
neuronal stem cell | 8.57e-09 | 8 |
neuron | 3.22e-08 | 6 |
neuroblast | 3.22e-08 | 6 |
electrically signaling cell | 3.22e-08 | 6 |
ciliated cell | 6.63e-07 | 3 |
ciliated epithelial cell | 6.63e-07 | 3 |
multi-ciliated epithelial cell | 6.63e-07 | 3 |
non-pigmented ciliary epithelial cell | 6.63e-07 | 3 |