FFCP PHASE1:Hg19::chr10:80027105..80027119,+: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene= | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_ncRNA | |||
|HGNC= | |||
|TSSclassifier=strong | |||
|UniProt= | |||
|association_with_transcript=6bp_to_uc001jzw.1_5end | |||
|description=CAGE_peak_1_at_uc001jzw.1_5end | |||
|id=chr10:80027105..80027119,+ | |||
|ontology_enrichment_celltype=CL:0002504!8.72e-07!3;CL:1000279!8.72e-07!3;CL:1000280!8.72e-07!3 | |||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease=DOID:0060084!1.77e-07!3;DOID:127!1.77e-07!3 | |||
|ontology_enrichment_disease_v019=DOID:0060084;6.79e-18;3!DOID:127;6.79e-18;3!DOID:0060072;1.14e-13;4 | |||
|ontology_enrichment_disease_v019_2=DOID:0060084,7.09e-18,3;DOID:127,7.09e-18,3;DOID:0060072,1.18e-13,4 | |||
|ontology_enrichment_uberon=UBERON:0007023!3.66e-18!115;UBERON:0001049!5.17e-17!57;UBERON:0005068!5.17e-17!57;UBERON:0006241!5.17e-17!57;UBERON:0007135!5.17e-17!57;UBERON:0000955!4.32e-16!69;UBERON:0006238!4.32e-16!69;UBERON:0005743!1.09e-14!86;UBERON:0001017!1.18e-14!82;UBERON:0000073!1.34e-14!94;UBERON:0001016!1.34e-14!94;UBERON:0002616!2.87e-13!59;UBERON:0002780!3.26e-13!41;UBERON:0001890!3.26e-13!41;UBERON:0006240!3.26e-13!41;UBERON:0003080!8.95e-13!42;UBERON:0002020!1.36e-11!34;UBERON:0003528!1.36e-11!34;UBERON:0001869!8.04e-11!32;UBERON:0003075!9.64e-11!86;UBERON:0007284!9.64e-11!86;UBERON:0001893!5.81e-10!34;UBERON:0002346!6.29e-10!90;UBERON:0003056!2.98e-09!61;UBERON:0002791!3.79e-09!33;UBERON:0000475!1.26e-08!365;UBERON:0002619!4.26e-08!22;UBERON:0000369!1.08e-07!4;UBERON:0002435!1.08e-07!4;UBERON:0000204!1.08e-07!4;UBERON:0010082!1.08e-07!4;UBERON:0000033!1.13e-07!123;UBERON:0000153!1.23e-07!129;UBERON:0007811!1.23e-07!129;UBERON:0001155!1.23e-07!9;UBERON:0002308!6.93e-07!9;UBERON:0000125!6.93e-07!9;UBERON:0000956!7.22e-07!25;UBERON:0000203!7.22e-07!25 | |||
|ontology_enrichment_uberon_v019=UBERON:0003296;6.39e-29;4!UBERON:0010133;6.39e-29;4!UBERON:0001905;1.78e-26;2!UBERON:0002757;1.78e-26;2!UBERON:0010134;1.78e-26;2!UBERON:0005408;1.78e-26;2!UBERON:0001899;1.78e-26;2!UBERON:0001894;7.94e-17;7!UBERON:0002784;9.44e-14;4!UBERON:0000007;1.81e-07;2!UBERON:0000160;8.41e-07;17 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0003296,5.83e-29,4;UBERON:0010133,5.83e-29,4;UBERON:0001905,1.90e-26,2;UBERON:0002757,1.90e-26,2;UBERON:0010134,1.90e-26,2;UBERON:0005408,1.90e-26,2;UBERON:0001899,1.90e-26,2;UBERON:0001894,7.53e-17,7;UBERON:0006222,7.53e-17,7;UBERON:0002784,9.75e-14,4;UBERON:0000007,1.64e-07,2;UBERON:0000160,7.84e-07,17 | |||
|phase1_expression=0,0,0.281908808191942,1.0007329835313,0.446961094427288,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.14828656316206,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.361439152384566,0,0,0,0,0,0,0,0.0654895377488563,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.132409180813219,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.179389635688862,0,0,0,0.103052529238439,0.257640540045629,0,0,0,0,0,0,0.355009592516614,0.503760491138201,0.169560592310488,0,0,0,0,0,0.116193942869518,0.10366105501537,0,0,0,0,0,0,0.721879481669586,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.258543431515556,0,0,0,0,0,0,0,0,0,0,0,0.355391948742546,0,0.602878754119172,0,0,0,0,0,0,0,0,0.579125226670317,0,0.537182889719687,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.256278298511402,0,0,0,0,0,0.0821271560138091,0,0.116210378459959,0,0,0,0.229628896329213,0,0.393373244878272,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.096670718292122,0,0,0,0,0.145016693914229,0,0.356128142586949,0,0,0,0,0,0,0,0,0,0.869932992075073,0,0,0,0,0,0,0,0,0,0.719489830333259,0.54907405947211,0.471249609382746,0,0,0,0,0,0,0,0.565621727814851,0,0.551365343546124,0,0,0.578775534266688,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.140669416410513,0,0,0,0,0,0,0,0,0,0,0,0,0.0986434056369336,0,0,0,0,1.99613798001194,1.04171104434093,0.0874599999961957,0,0,0,0,0,0.874813840149763,0,0.885741385813839,0.241192877250816,0,0,0.295547618953547,0,0,0,0.307801034015188,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.99052386215701,0.176915129006678,1.22206028986725,0,0,0,0,0,0,0,0,0,0.394584402849391,1.20990716048664,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0821154570532092,0.290967049465258,0,0,0,0,0.189932387867636,0,0,0.213452994739353,0,0,0,0,0,0,0,0.135904206073614,0.209205692624666,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.795229689809303,0.136203406111576,0,0,0,0,0,0.121499113316049,0,0,0,0,0,0,0.714695326373367,0,0,2.71499800876856,4.32110745600634,0.979762080328227,0,0,0.340776043570843,0,0,0,0.258565912723101,0.39669780522807,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.122026264901963,0,0,0,0.620964029413834,0.415045904808692,0,0,0,0,0,0,0,0,0,0,0.251567901752575,0,0,0,0,0,0,0,0,0,0,0,0.300515217994437,0.380805212168795,0,0.181848659202559,0.107410557042488,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.255788742607303,1.1860729253635,0,0,0,0,0,0,0,0,0,0,4.593682160298,0.321146125482298,0,0,0,0,0.0691572524642179,0.322951291263702,0,0,0,0,0,0,0,0,0.0752103283492573,0.40341013740704,0,0,0,0,0.0675375846183947,0,0.206686796501184,0.380494861163441,0,0,0,0,0,3.21421101526972,8.07080933325178,0,1.36597314810779,0,0,0,0.747667062745149,0.0657727735628491,0,0,0.313972371402056,0.157115589916002,0,0,0,0,0.357382720883282,1.26410889386181,0,0,0,0,0,0,0,0,0,0.423387050190929,0,0,0,0,0,0,0,0.102662806856247,3.4794432940146,0,0,0,0,0,0.109940516745429,0,0.771741581079447,0,0,0.490296643507811,0,0.785233868459781,0,0.8453114551668,0,0,0,0,0,0,0,0,0,0,0,0.0679914901909147,0,0.5290268405154,0,0,0,0,0,1.64708051314868,0,0,0,0,0,0.267964130156178,0,0.20686599172379,0,0.714193294391221,0,0,0,0,0,0,0.684466602170562,0,0,0.332660356546013,0,0,0,0,0,0.244482888365733,0.406896178315738,0,0,0 | |||
|short_description=p1@uc001jzw.1 | |||
}} |
Revision as of 03:40, 11 January 2014
Short description: | p1@uc001jzw.1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_uc001jzw.1_5end |
Coexpression cluster: | NA |
Association with transcript: | 6bp_to_uc001jzw.1_5end |
EntrezGene: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
gland of diencephalon | 5.83e-29 | 4 |
neuroendocrine gland | 5.83e-29 | 4 |
pineal body | 1.90e-26 | 2 |
regional part of epithalamus | 1.90e-26 | 2 |
secretory circumventricular organ | 1.90e-26 | 2 |
circumventricular organ | 1.90e-26 | 2 |
epithalamus | 1.90e-26 | 2 |
diencephalon | 7.53e-17 | 7 |
future diencephalon | 7.53e-17 | 7 |
regional part of diencephalon | 9.75e-14 | 4 |
pituitary gland | 1.64e-07 | 2 |
intestine | 7.84e-07 | 17 |
Ontology term | p-value | n |
---|---|---|
cell type benign neoplasm | 7.09e-18 | 3 |
leiomyoma | 7.09e-18 | 3 |
benign neoplasm | 1.18e-13 | 4 |