FFCP PHASE1:Hg19::chrX:65382336..65382364,+: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=9843|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding|HGNC=4866|TSSclassifier=S|UniProt=E9PHN8|association_with_transcript=-26bp_to_ENST00000519389_5end|coexpression_cluster_id=C1723|description=CAGE_peak_6_at_HEPH_5end|id=chrX:65382336..65382364,+|ontology_enrichment_celltype=CL:0000569!5.21e-09!4;CL:0000011!5.21e-09!4|ontology_enrichment_celltype_v019=CL:0002563;2.17e-08;4|ontology_enrichment_celltype_v019_2=CL:0002563,2.13e-08,4|ontology_enrichment_development_v019=UBERON:0006242;1.02e-08;1!UBERON:0001045;1.71e-08;1|ontology_enrichment_disease=DOID:8692!8.75e-19!31;DOID:1240!2.44e-14!39;DOID:1036!1.37e-12!8;DOID:2531!5.34e-12!51;DOID:0060083!5.34e-12!51|ontology_enrichment_disease_v019=DOID:1036;1.20e-21;8!DOID:8692;4.40e-13;31!DOID:1240;1.01e-08;39|ontology_enrichment_disease_v019_2=DOID:1036,1.40e-21,8;DOID:8692,3.18e-13,31;DOID:1240,2.71e-10,39;DOID:2531,1.27e-07,51;DOID:0060083,1.27e-07,51|ontology_enrichment_uberon=UBERON:0005409!1.26e-19!35;UBERON:0000059!3.00e-18!11;UBERON:0000160!3.40e-16!27;UBERON:0004907!6.28e-14!5;UBERON:0001155!9.32e-12!9;UBERON:0001052!2.76e-10!4|ontology_enrichment_uberon_v019=UBERON:0005409;1.20e-50;22!UBERON:0000160;4.23e-47;17!UBERON:0000059;8.41e-32;11!UBERON:0004921;9.52e-30;33!UBERON:0004907;1.47e-23;5!UBERON:0001155;3.00e-20;9!UBERON:0001052;3.91e-17;4!UBERON:0002108;1.14e-13;4!UBERON:0001555;7.10e-11;54!UBERON:0001007;8.64e-09;81!UBERON:0001154;1.71e-08;1!UBERON:0001153;1.71e-08;1!UBERON:0009854;1.71e-08;1!UBERON:0001242;2.17e-08;4!UBERON:0001262;2.17e-08;4!UBERON:0004786;2.17e-08;4!UBERON:0004808;2.17e-08;4!UBERON:0001277;2.17e-08;4|ontology_enrichment_uberon_v019_2=UBERON:0000160,4.33e-47,17;UBERON:0005409,1.33e-44,25;UBERON:0000059,8.22e-32,11;UBERON:0004907,1.43e-23,5;UBERON:0001155,3.00e-20,9;UBERON:0001052,3.81e-17,4;UBERON:0002108,1.22e-13,4;UBERON:0004921,7.73e-11,118;UBERON:0001007,1.21e-09,145;UBERON:0001555,1.21e-09,145;UBERON:0007026,1.21e-09,145;UBERON:0001046,1.72e-09,19;UBERON:0001154,1.71e-08,1;UBERON:0001153,1.71e-08,1;UBERON:0001045,1.71e-08,1;UBERON:0004119,1.85e-08,160;UBERON:0000925,1.85e-08,160;UBERON:0006595,1.85e-08,160;UBERON:0001242,2.13e-08,4;UBERON:0001262,2.13e-08,4;UBERON:0004786,2.13e-08,4;UBERON:0004808,2.13e-08,4;UBERON:0001277,2.13e-08,4|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.152826811495903,0.0821005894499457,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,20.9080345523293,0,0.109750285408626,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.205476322550383,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,20.3043875313925,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.206082023295445,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.464845549297286,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.438450885253763,0,0,0.202910376962704,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.798317485731266,0,0,0,0,0,0,0,0.338583555603207,0,0,0,0,0,0,0.166849141711909,0,0.835218521685727,1.23087398947712,1.6227340708559,0,1.4098700508785,43.0423242938906,0,0,0,0,0,0,0,0,0,0,0,0,0,4.97311047956066,0,0,0.246169610922139,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.139423744278603,0.0769502585037971,0,0,0,0,0,0,0,0,0,0.166211681900156,1.1279783030859,1.56850027454192,3.02078856556517,2.08729105996604,0,0,0,11.1668926432813,0,21.8957624837271,5.13053874119367,15.8867837682743,0,0,0,0,0,0,0,0,0,0,8.46935012340647,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.387956065953678,0,0,0,0,0,0,0,9.39193176853151,0,1.72908500584927,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,6.98975697164723,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.08599920350743,0,0,0,1.14929529049075,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.554805861502613,0,0,0,0.228840068396924,0.151230923763239,0.15543720058278,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,24.3836782082996,2.73947616152849,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,12.1917924982269,0,0,0,0,0,0,0,0,0,0,6.09675849052763,8.30526329915038,0,0,0,0,0,0,0,0,0,0.0999411559249289,0,0,0,1.46067277649303,0,0,0,0,0,6.87734892670021,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.217716747896961,0,0,0,0,0,0,0,0,0,0,0,0,0,0|short_description=p6@HEPH}} | ||
|DPIdataset=robustDPI | |||
|EntrezGene=9843 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=4866 | |||
|TSSclassifier=S | |||
|UniProt=E9PHN8 | |||
|association_with_transcript=-26bp_to_ENST00000519389_5end | |||
|coexpression_cluster_id=C1723 | |||
|description=CAGE_peak_6_at_HEPH_5end | |||
|id=chrX:65382336..65382364,+ | |||
|ontology_enrichment_celltype=CL:0000569!5.21e-09!4;CL:0000011!5.21e-09!4 | |||
|ontology_enrichment_celltype_v019=CL:0002563;2.17e-08;4 | |||
|ontology_enrichment_celltype_v019_2=CL:0002563,2.13e-08,4 | |||
|ontology_enrichment_development_v019=UBERON:0006242;1.02e-08;1!UBERON:0001045;1.71e-08;1 | |||
|ontology_enrichment_disease=DOID:8692!8.75e-19!31;DOID:1240!2.44e-14!39;DOID:1036!1.37e-12!8;DOID:2531!5.34e-12!51;DOID:0060083!5.34e-12!51 | |||
|ontology_enrichment_disease_v019=DOID:1036;1.20e-21;8!DOID:8692;4.40e-13;31!DOID:1240;1.01e-08;39 | |||
|ontology_enrichment_disease_v019_2=DOID:1036,1.40e-21,8;DOID:8692,3.18e-13,31;DOID:1240,2.71e-10,39;DOID:2531,1.27e-07,51;DOID:0060083,1.27e-07,51 | |||
|ontology_enrichment_uberon=UBERON:0005409!1.26e-19!35;UBERON:0000059!3.00e-18!11;UBERON:0000160!3.40e-16!27;UBERON:0004907!6.28e-14!5;UBERON:0001155!9.32e-12!9;UBERON:0001052!2.76e-10!4 | |||
|ontology_enrichment_uberon_v019=UBERON:0005409;1.20e-50;22!UBERON:0000160;4.23e-47;17!UBERON:0000059;8.41e-32;11!UBERON:0004921;9.52e-30;33!UBERON:0004907;1.47e-23;5!UBERON:0001155;3.00e-20;9!UBERON:0001052;3.91e-17;4!UBERON:0002108;1.14e-13;4!UBERON:0001555;7.10e-11;54!UBERON:0001007;8.64e-09;81!UBERON:0001154;1.71e-08;1!UBERON:0001153;1.71e-08;1!UBERON:0009854;1.71e-08;1!UBERON:0001242;2.17e-08;4!UBERON:0001262;2.17e-08;4!UBERON:0004786;2.17e-08;4!UBERON:0004808;2.17e-08;4!UBERON:0001277;2.17e-08;4 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000160,4.33e-47,17;UBERON:0005409,1.33e-44,25;UBERON:0000059,8.22e-32,11;UBERON:0004907,1.43e-23,5;UBERON:0001155,3.00e-20,9;UBERON:0001052,3.81e-17,4;UBERON:0002108,1.22e-13,4;UBERON:0004921,7.73e-11,118;UBERON:0001007,1.21e-09,145;UBERON:0001555,1.21e-09,145;UBERON:0007026,1.21e-09,145;UBERON:0001046,1.72e-09,19;UBERON:0001154,1.71e-08,1;UBERON:0001153,1.71e-08,1;UBERON:0001045,1.71e-08,1;UBERON:0004119,1.85e-08,160;UBERON:0000925,1.85e-08,160;UBERON:0006595,1.85e-08,160;UBERON:0001242,2.13e-08,4;UBERON:0001262,2.13e-08,4;UBERON:0004786,2.13e-08,4;UBERON:0004808,2.13e-08,4;UBERON:0001277,2.13e-08,4 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.152826811495903,0.0821005894499457,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,20.9080345523293,0,0.109750285408626,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.205476322550383,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,20.3043875313925,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.206082023295445,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.464845549297286,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.438450885253763,0,0,0.202910376962704,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.798317485731266,0,0,0,0,0,0,0,0.338583555603207,0,0,0,0,0,0,0.166849141711909,0,0.835218521685727,1.23087398947712,1.6227340708559,0,1.4098700508785,43.0423242938906,0,0,0,0,0,0,0,0,0,0,0,0,0,4.97311047956066,0,0,0.246169610922139,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.139423744278603,0.0769502585037971,0,0,0,0,0,0,0,0,0,0.166211681900156,1.1279783030859,1.56850027454192,3.02078856556517,2.08729105996604,0,0,0,11.1668926432813,0,21.8957624837271,5.13053874119367,15.8867837682743,0,0,0,0,0,0,0,0,0,0,8.46935012340647,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.387956065953678,0,0,0,0,0,0,0,9.39193176853151,0,1.72908500584927,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,6.98975697164723,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.08599920350743,0,0,0,1.14929529049075,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.554805861502613,0,0,0,0.228840068396924,0.151230923763239,0.15543720058278,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,24.3836782082996,2.73947616152849,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,12.1917924982269,0,0,0,0,0,0,0,0,0,0,6.09675849052763,8.30526329915038,0,0,0,0,0,0,0,0,0,0.0999411559249289,0,0,0,1.46067277649303,0,0,0,0,0,6.87734892670021,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.217716747896961,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | |||
|short_description=p6@HEPH | |||
}} |
Revision as of 12:21, 14 September 2013
Short description: | p6@HEPH |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_6_at_HEPH_5end |
Coexpression cluster: | C1723_adenocarcinoma_Intestinal_Prostate_rectal_colon_small_duodenum |
Association with transcript: | -26bp_to_ENST00000519389_5end |
EntrezGene: | HEPH |
HGNC: | 4866 |
UniProt: | E9PHN8 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
intestinal epithelial cell | 2.13e-08 | 4 |
Ontology term | p-value | n |
---|---|---|
intestine | 4.33e-47 | 17 |
gastrointestinal system | 1.33e-44 | 25 |
large intestine | 8.22e-32 | 11 |
lower digestive tract | 1.43e-23 | 5 |
colon | 3.00e-20 | 9 |
rectum | 3.81e-17 | 4 |
small intestine | 1.22e-13 | 4 |
subdivision of digestive tract | 7.73e-11 | 118 |
digestive system | 1.21e-09 | 145 |
digestive tract | 1.21e-09 | 145 |
primitive gut | 1.21e-09 | 145 |
hindgut | 1.72e-09 | 19 |
vermiform appendix | 1.71e-08 | 1 |
caecum | 1.71e-08 | 1 |
midgut | 1.71e-08 | 1 |
endoderm-derived structure | 1.85e-08 | 160 |
endoderm | 1.85e-08 | 160 |
presumptive endoderm | 1.85e-08 | 160 |
intestinal mucosa | 2.13e-08 | 4 |
wall of intestine | 2.13e-08 | 4 |
gastrointestinal system mucosa | 2.13e-08 | 4 |
gastrointestinal system epithelium | 2.13e-08 | 4 |
intestinal epithelium | 2.13e-08 | 4 |
Ontology term | p-value | n |
---|---|---|
chronic leukemia | 1.40e-21 | 8 |
myeloid leukemia | 3.18e-13 | 31 |
leukemia | 2.71e-10 | 39 |
hematologic cancer | 1.27e-07 | 51 |
immune system cancer | 1.27e-07 | 51 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.