FFCP PHASE1:Hg19::chr9:131675024..131675057,+: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=56262|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding|HGNC=19027|TSSclassifier=S|UniProt=|association_with_transcript=1bp_to_ENST00000492784_5end|description=CAGE_peak_2_at_LRRC8A_5end|id=chr9:131675024..131675057,+|ontology_enrichment_celltype=CL:0000066!2.09e-26!254;CL:0002321!9.87e-20!248;CL:0000220!1.06e-19!246;CL:0002139!2.00e-14!24;CL:0000076!2.82e-13!62;CL:0000115!1.39e-12!35;CL:0000071!1.98e-12!18;CL:0002546!1.98e-12!18;CL:0002076!2.40e-11!43;CL:0002078!4.55e-11!44;CL:0002368!4.95e-11!13;CL:0000222!1.21e-08!119;CL:0000223!1.92e-07!59;CL:0002202!2.51e-07!9;CL:0002632!2.51e-07!9;CL:1000449!4.14e-07!16|ontology_enrichment_celltype_v019=CL:0002368;1.54e-22;13!CL:0002139;6.09e-21;24!CL:0000071;1.16e-17;18!CL:0000115;1.79e-16;36!CL:0002202;1.32e-14;9!CL:0002632;1.32e-14;9!CL:0002078;9.05e-14;45!CL:0002076;3.17e-13;42!CL:0000076;1.32e-10;63!CL:0002159;1.08e-09;14!CL:0000244;8.05e-09;4!CL:0000731;8.05e-09;4!CL:0002543;1.15e-07;6!CL:0002328;1.27e-07;3!CL:1000449;1.29e-07;15!CL:0000307;1.51e-07;3!CL:0002681;1.73e-07;12!CL:0002584;1.73e-07;12!CL:1000413;4.05e-07;9!CL:0000213;7.03e-07;58!CL:0000215;7.03e-07;58!CL:0002144;9.41e-07;3|ontology_enrichment_celltype_v019_2=CL:0000066,7.58e-36,253;CL:0002368,2.36e-22,13;CL:0002139,3.93e-21,24;CL:0000115,5.34e-20,36;CL:0002078,7.74e-20,45;CL:0002321,2.96e-19,250;CL:0000076,4.43e-18,63;CL:0000071,8.50e-18,18;CL:0002546,8.50e-18,18;CL:0002076,1.08e-16,42;CL:0002202,1.82e-14,9;CL:0002632,1.82e-14,9;CL:0000223,8.24e-13,58;CL:0000213,3.93e-10,58;CL:0000215,3.93e-10,58;CL:0002159,4.19e-10,14;CL:0000244,9.15e-09,4;CL:0000731,9.15e-09,4;CL:0002543,1.06e-07,6;CL:0002328,1.32e-07,3;CL:0000068,1.50e-07,3;CL:0000069,1.50e-07,3;CL:0000307,1.50e-07,3;CL:0000377,1.50e-07,3;CL:1000449,1.67e-07,15;CL:0002681,2.29e-07,12;CL:0002584,2.29e-07,12;CL:1000413,3.62e-07,9;CL:0002077,6.15e-07,34;CL:0002144,8.24e-07,3|ontology_enrichment_development_v019=CL:0002546;1.16e-17;18!CL:0000223;6.04e-08;58!CL:0000377;1.51e-07;3|ontology_enrichment_disease=DOID:1749!2.04e-08!14|ontology_enrichment_disease_v019=DOID:1749;9.85e-08;14|ontology_enrichment_disease_v019_2=DOID:1749,1.02e-07,14|ontology_enrichment_uberon=UBERON:0000483!2.52e-17!309;UBERON:0000119!3.15e-17!312;UBERON:0002049!2.56e-13!79;UBERON:0007798!2.56e-13!79;UBERON:0000467!1.40e-12!625;UBERON:0000480!1.87e-12!626;UBERON:0001986!1.98e-12!18;UBERON:0004638!1.98e-12!18;UBERON:0004852!1.98e-12!18;UBERON:0000055!4.25e-12!69;UBERON:0000487!6.49e-12!22;UBERON:0004111!1.36e-11!241;UBERON:0000468!1.88e-11!659;UBERON:0003914!2.28e-11!118;UBERON:0001981!2.62e-11!60;UBERON:0007500!2.62e-11!60;UBERON:0004537!2.62e-11!60;UBERON:0006965!2.62e-11!60;UBERON:0000475!7.36e-10!365;UBERON:0000477!1.13e-09!286;UBERON:0006914!1.32e-09!25;UBERON:0000025!2.13e-09!194;UBERON:0001009!2.20e-09!113;UBERON:0000490!2.53e-09!138;UBERON:0001637!3.20e-09!42;UBERON:0003509!3.20e-09!42;UBERON:0004572!3.20e-09!42;UBERON:0004535!5.32e-09!110;UBERON:0004872!1.82e-08!84;UBERON:0000922!1.51e-07!612;UBERON:0000923!2.99e-07!604;UBERON:0005291!2.99e-07!604;UBERON:0006598!2.99e-07!604;UBERON:0002532!2.99e-07!604;UBERON:0002050!3.75e-07!605;UBERON:0005423!3.75e-07!605;UBERON:0007196!3.98e-07!14;UBERON:0001558!3.98e-07!14;UBERON:0004211!4.14e-07!16;UBERON:0001285!4.14e-07!16;UBERON:0007684!4.14e-07!16;UBERON:0003220!4.14e-07!16;UBERON:0004208!4.14e-07!16;UBERON:0000064!5.00e-07!219;UBERON:0004573!5.08e-07!33;UBERON:0004571!5.08e-07!33;UBERON:0000947!7.16e-07!21;UBERON:0010191!7.16e-07!21|ontology_enrichment_uberon_v019=UBERON:0000487;2.06e-18;22!UBERON:0004638;1.16e-17;18!UBERON:0001986;1.16e-17;18!UBERON:0004852;1.16e-17;18!UBERON:0000490;8.00e-17;33!UBERON:0006914;1.11e-15;25!UBERON:0007196;4.39e-12;15!UBERON:0001558;4.39e-12;15!UBERON:0004815;1.27e-07;3!UBERON:0002031;1.27e-07;3!UBERON:0006555;1.29e-07;15!UBERON:0004819;1.29e-07;15!UBERON:0001285;1.29e-07;15!UBERON:0007684;1.29e-07;15!UBERON:0001225;1.73e-07;12!UBERON:0008987;1.73e-07;12!UBERON:0003914;2.14e-07;74!UBERON:0000353;2.59e-07;15!UBERON:0006554;2.65e-07;30!UBERON:0001008;2.65e-07;30!UBERON:0003126;3.49e-07;7!UBERON:0001005;3.49e-07;7!UBERON:0003915;4.05e-07;9!UBERON:0004700;4.05e-07;9!UBERON:0001917;4.05e-07;9!UBERON:0000025;4.99e-07;93!UBERON:0000365;5.03e-07;5!UBERON:0005178;5.79e-07;34!UBERON:0002224;5.79e-07;34!UBERON:0010523;9.41e-07;3!UBERON:0001915;9.41e-07;3!UBERON:0001982;9.41e-07;3|ontology_enrichment_uberon_v019_2=UBERON:0000487,1.92e-18,22;UBERON:0004638,8.50e-18,18;UBERON:0001986,8.50e-18,18;UBERON:0004852,8.50e-18,18;UBERON:0006914,1.05e-15,25;UBERON:0007196,8.00e-12,15;UBERON:0001558,8.00e-12,15;UBERON:0000055,3.44e-09,68;UBERON:0000483,4.81e-09,306;UBERON:0000119,8.19e-09,309;UBERON:0003914,1.60e-08,117;UBERON:0002049,4.76e-08,78;UBERON:0007798,4.76e-08,78;UBERON:0004815,1.32e-07,3;UBERON:0002031,1.32e-07,3;UBERON:0004211,1.67e-07,15;UBERON:0009773,1.67e-07,15;UBERON:0001231,1.67e-07,15;UBERON:0001285,1.67e-07,15;UBERON:0007684,1.67e-07,15;UBERON:0004208,1.67e-07,15;UBERON:0007500,2.13e-07,59;UBERON:0001981,2.13e-07,59;UBERON:0004537,2.13e-07,59;UBERON:0006965,2.13e-07,59;UBERON:0001225,2.29e-07,12;UBERON:0008987,2.29e-07,12;UBERON:0000353,3.18e-07,15;UBERON:0005178,3.19e-07,34;UBERON:0002224,3.19e-07,34;UBERON:0003915,3.62e-07,9;UBERON:0004700,3.62e-07,9;UBERON:0001917,3.62e-07,9;UBERON:0003126,5.21e-07,7;UBERON:0001005,5.21e-07,7;UBERON:0000365,5.56e-07,5;UBERON:0006555,6.13e-07,16;UBERON:0004819,6.13e-07,16;UBERON:0005181,6.26e-07,35;UBERON:0010523,8.24e-07,3;UBERON:0001915,8.24e-07,3;UBERON:0001982,8.24e-07,3;UBERON:0000065,8.76e-07,54|phase1_expression=0.181678379270557,0,0,0,0,0,0,0,0,3.19454117451962,9.76921635161399,0.873765488520689,0.263766978228454,0,0,0.672325146451775,1.20538905604795,0,1.46379839637152,0.61560529038394,0.612002073732759,0.626909442956176,0.572471974262113,0.958120975510189,0.87879847716362,0,0,0,0,0,0,4.59710612239464,7.228942050678,14.0506523863379,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.383587685530591,0,0.50133791063589,0,0,0,1.32348744029695,0.886917589850256,0.263504357079378,0.196468613246569,9.10738220731355,0.741568885568859,0,0,0,0,0,0,2.18638648103376,0.860234595106124,2.42998351125316,0.56530794192401,1.67799774483962,2.47606237746061,2.50793959844173,0.258416759169329,0,1.00416183829401,3.62546385398232,5.32190474002959,1.46437234528902,1.47065232138347,0,1.25019619597712,0.673588117878509,1.46394924628319,1.53316637465883,2.84779697870439,3.48083313467774,0,0,13.5189156164186,0,0.379891534993739,0.132409180813219,0.286836620748814,0.354668382198357,0.560677600142307,1.06748995729705,0.24666754841716,0,0.269421344139376,0.163461903113459,0.151357427644931,0,0.234321431833797,0,1.71141546463335,0.149448680551801,0.587172493218824,0.323745888736263,0.561803226808994,0,0.491337269247072,0,0,0,0,0,0.336672227908132,0.750711119231785,0,0.438977620880838,0,0,0.340296549480063,0.358779271377724,0,0.211931901159562,0,0.515262646192195,0.257640540045629,0,0.168776332241266,0.389748020644795,0.504867548488229,0.184099797284599,0.323292113637624,0,0.503760491138201,0.847802961552438,1.93260853163297,3.27295344709002,0.860413786167011,0.243947412259191,0,0.116193942869518,0.207322110030741,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.4763109092493,0,0,0,0,0,0,0,0.491953754172454,0.343135620597051,2.52425656439839,7.86812272803337,2.91534019993729,2.59247646443883,0,0,2.88662684050547,0.231860809950154,0.234817388471643,2.59859605969933,1.85194205030644,1.52203321787679,0,0,0,0,0,1.87467667973554,1.6798212819886,2.41017665312057,2.4180801129769,2.61570544662566,1.15014803749563,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.36669142910475,0,0,0,0.531876233169741,0,0.257207374262142,1.41849132023278,0.266422179016099,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.42636905040718,0.144781306667579,0.410952645100767,0.179060963239896,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.271265023699736,0,0.178428988797162,0,0,0,0,0,0,0.368738337083406,0,0.195801157462741,0,0,0,0,0.303127571446259,0,0.30239029332968,0,0,0,0,0,0,0,0.462629081407967,0,0,0,0.116210378459959,0,0.601519410909855,6.16942625870505,0,0,0,2.25599806453706,0.693138033939733,0.784349769176855,7.30696123266303,0.422206515571503,0,2.2112181685947,0.215915916102139,4.62681758070868,0.270946437543853,0,1.27438136522519,2.49322802678617,3.1342465661105,0,0,0.256450125116389,0,0,0.206082023295445,0,0,1.72279661398852,1.95018073810956,0,0,0.154048617114644,0.15350367472613,0.137836572484531,0,0,0.0852266274161009,0,10.5782345831026,5.18913181885787,18.2486178867255,7.18220244074405,0.929691098594572,0.31481234683064,1.3940745403212,0,1.06461206063404,0,0.37064843820784,0.143124886741991,0,0.316379424718726,0,0,0,0,0.78494864019923,0.179872457583315,0,0,0.202182481573316,1.58510321173008,0.421258456238981,0.975267478179181,0,0,0.136499911407986,0,0,0,0.66343897524122,0,0.578775534266688,0,0.202910376962704,0.6196469961995,0.563391205064483,0,0,0,0,0,0,0.379473173765715,0,19.3406446578279,3.35151137767894,6.53345909167936,0.188287601553558,2.15252686335615,5.05414427002877,5.32116184244011,2.52695740227655,0,0,0,0,0,0.648473311192717,0,0.79312517629427,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,6.44610108791763,0,5.52889263778618,0,0.281338832821026,0.222617410045812,0,3.3780065300479,0.19924798825107,0,0,7.4656138226573,0,0.311039587661807,2.06697207638852,0,0,0.197286811273867,0,0,0,0.0927680981618513,0,0,0,0,1.137934482855,1.27126825146383,0,0,0,0,0,1.5677537021303,0,0,0,0,0,0.139423744278603,0,0,0,0,0,0.957003479195758,0.0915975934018623,0,0,0,0,0,0,0,0,0,0.210998064528027,0.816164040795739,0.141353071433941,0,0,0,0,0,0,0,0,0,0.234264445725339,0,2.34797542718508,0,0,0,0,0,0,0,0,0,0,0,0,0,0.520679215005393,2.25382514053069,2.52471699083167,0,5.84752510403496,0,0,0,0.387956065953678,0,0,0.274083849293502,0.19871461170299,0,0.195551382734803,0.48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| ||
|DPIdataset=robustDPI | |||
|EntrezGene=56262 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=19027 | |||
|TSSclassifier=S | |||
|UniProt= | |||
|association_with_transcript=1bp_to_ENST00000492784_5end | |||
|description=CAGE_peak_2_at_LRRC8A_5end | |||
|id=chr9:131675024..131675057,+ | |||
|ontology_enrichment_celltype=CL:0000066!2.09e-26!254;CL:0002321!9.87e-20!248;CL:0000220!1.06e-19!246;CL:0002139!2.00e-14!24;CL:0000076!2.82e-13!62;CL:0000115!1.39e-12!35;CL:0000071!1.98e-12!18;CL:0002546!1.98e-12!18;CL:0002076!2.40e-11!43;CL:0002078!4.55e-11!44;CL:0002368!4.95e-11!13;CL:0000222!1.21e-08!119;CL:0000223!1.92e-07!59;CL:0002202!2.51e-07!9;CL:0002632!2.51e-07!9;CL:1000449!4.14e-07!16 | |||
|ontology_enrichment_celltype_v019=CL:0002368;1.54e-22;13!CL:0002139;6.09e-21;24!CL:0000071;1.16e-17;18!CL:0000115;1.79e-16;36!CL:0002202;1.32e-14;9!CL:0002632;1.32e-14;9!CL:0002078;9.05e-14;45!CL:0002076;3.17e-13;42!CL:0000076;1.32e-10;63!CL:0002159;1.08e-09;14!CL:0000244;8.05e-09;4!CL:0000731;8.05e-09;4!CL:0002543;1.15e-07;6!CL:0002328;1.27e-07;3!CL:1000449;1.29e-07;15!CL:0000307;1.51e-07;3!CL:0002681;1.73e-07;12!CL:0002584;1.73e-07;12!CL:1000413;4.05e-07;9!CL:0000213;7.03e-07;58!CL:0000215;7.03e-07;58!CL:0002144;9.41e-07;3 | |||
|ontology_enrichment_celltype_v019_2=CL:0000066,7.58e-36,253;CL:0002368,2.36e-22,13;CL:0002139,3.93e-21,24;CL:0000115,5.34e-20,36;CL:0002078,7.74e-20,45;CL:0002321,2.96e-19,250;CL:0000076,4.43e-18,63;CL:0000071,8.50e-18,18;CL:0002546,8.50e-18,18;CL:0002076,1.08e-16,42;CL:0002202,1.82e-14,9;CL:0002632,1.82e-14,9;CL:0000223,8.24e-13,58;CL:0000213,3.93e-10,58;CL:0000215,3.93e-10,58;CL:0002159,4.19e-10,14;CL:0000244,9.15e-09,4;CL:0000731,9.15e-09,4;CL:0002543,1.06e-07,6;CL:0002328,1.32e-07,3;CL:0000068,1.50e-07,3;CL:0000069,1.50e-07,3;CL:0000307,1.50e-07,3;CL:0000377,1.50e-07,3;CL:1000449,1.67e-07,15;CL:0002681,2.29e-07,12;CL:0002584,2.29e-07,12;CL:1000413,3.62e-07,9;CL:0002077,6.15e-07,34;CL:0002144,8.24e-07,3 | |||
|ontology_enrichment_development_v019=CL:0002546;1.16e-17;18!CL:0000223;6.04e-08;58!CL:0000377;1.51e-07;3 | |||
|ontology_enrichment_disease=DOID:1749!2.04e-08!14 | |||
|ontology_enrichment_disease_v019=DOID:1749;9.85e-08;14 | |||
|ontology_enrichment_disease_v019_2=DOID:1749,1.02e-07,14 | |||
|ontology_enrichment_uberon=UBERON:0000483!2.52e-17!309;UBERON:0000119!3.15e-17!312;UBERON:0002049!2.56e-13!79;UBERON:0007798!2.56e-13!79;UBERON:0000467!1.40e-12!625;UBERON:0000480!1.87e-12!626;UBERON:0001986!1.98e-12!18;UBERON:0004638!1.98e-12!18;UBERON:0004852!1.98e-12!18;UBERON:0000055!4.25e-12!69;UBERON:0000487!6.49e-12!22;UBERON:0004111!1.36e-11!241;UBERON:0000468!1.88e-11!659;UBERON:0003914!2.28e-11!118;UBERON:0001981!2.62e-11!60;UBERON:0007500!2.62e-11!60;UBERON:0004537!2.62e-11!60;UBERON:0006965!2.62e-11!60;UBERON:0000475!7.36e-10!365;UBERON:0000477!1.13e-09!286;UBERON:0006914!1.32e-09!25;UBERON:0000025!2.13e-09!194;UBERON:0001009!2.20e-09!113;UBERON:0000490!2.53e-09!138;UBERON:0001637!3.20e-09!42;UBERON:0003509!3.20e-09!42;UBERON:0004572!3.20e-09!42;UBERON:0004535!5.32e-09!110;UBERON:0004872!1.82e-08!84;UBERON:0000922!1.51e-07!612;UBERON:0000923!2.99e-07!604;UBERON:0005291!2.99e-07!604;UBERON:0006598!2.99e-07!604;UBERON:0002532!2.99e-07!604;UBERON:0002050!3.75e-07!605;UBERON:0005423!3.75e-07!605;UBERON:0007196!3.98e-07!14;UBERON:0001558!3.98e-07!14;UBERON:0004211!4.14e-07!16;UBERON:0001285!4.14e-07!16;UBERON:0007684!4.14e-07!16;UBERON:0003220!4.14e-07!16;UBERON:0004208!4.14e-07!16;UBERON:0000064!5.00e-07!219;UBERON:0004573!5.08e-07!33;UBERON:0004571!5.08e-07!33;UBERON:0000947!7.16e-07!21;UBERON:0010191!7.16e-07!21 | |||
|ontology_enrichment_uberon_v019=UBERON:0000487;2.06e-18;22!UBERON:0004638;1.16e-17;18!UBERON:0001986;1.16e-17;18!UBERON:0004852;1.16e-17;18!UBERON:0000490;8.00e-17;33!UBERON:0006914;1.11e-15;25!UBERON:0007196;4.39e-12;15!UBERON:0001558;4.39e-12;15!UBERON:0004815;1.27e-07;3!UBERON:0002031;1.27e-07;3!UBERON:0006555;1.29e-07;15!UBERON:0004819;1.29e-07;15!UBERON:0001285;1.29e-07;15!UBERON:0007684;1.29e-07;15!UBERON:0001225;1.73e-07;12!UBERON:0008987;1.73e-07;12!UBERON:0003914;2.14e-07;74!UBERON:0000353;2.59e-07;15!UBERON:0006554;2.65e-07;30!UBERON:0001008;2.65e-07;30!UBERON:0003126;3.49e-07;7!UBERON:0001005;3.49e-07;7!UBERON:0003915;4.05e-07;9!UBERON:0004700;4.05e-07;9!UBERON:0001917;4.05e-07;9!UBERON:0000025;4.99e-07;93!UBERON:0000365;5.03e-07;5!UBERON:0005178;5.79e-07;34!UBERON:0002224;5.79e-07;34!UBERON:0010523;9.41e-07;3!UBERON:0001915;9.41e-07;3!UBERON:0001982;9.41e-07;3 | |||
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| |||
|short_description=p2@LRRC8A | |||
}} |
Revision as of 07:43, 14 September 2013
Short description: | p2@LRRC8A |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_2_at_LRRC8A_5end |
Coexpression cluster: | NA |
Association with transcript: | 1bp_to_ENST00000492784_5end |
EntrezGene: | LRRC8A |
HGNC: | 19027 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
squamous cell carcinoma | 1.02e-07 | 14 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.