FFCP PHASE1:Hg19::chr9:77567221..77567264,-: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=55071|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=novel_coding|HGNC=23433|TSSclassifier=S|UniProt=Q8IXQ3|association_with_transcript=471bp_to_BC039588_5end|coexpression_cluster_id=C14|description=CAGE_peak_4_at_C9orf40_5end|id=chr9:77567221..77567264,-|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019=CL:0000764;1.38e-08;2!CL:0000558;1.38e-08;2|ontology_enrichment_celltype_v019_2=CL:0000764,1.44e-08,2;CL:0000765,1.44e-08,2;CL:0000050,1.44e-08,2;CL:0000038,1.44e-08,2;CL:0000558,1.44e-08,2;CL:0000547,1.44e-08,2;CL:0000549,1.44e-08,2;CL:0000550,1.44e-08,2;CL:0000552,1.44e-08,2|ontology_enrichment_development_v019=|ontology_enrichment_disease=|ontology_enrichment_disease_v019=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0007023!1.85e-20!115;UBERON:0001049!9.70e-15!57;UBERON:0005068!9.70e-15!57;UBERON:0006241!9.70e-15!57;UBERON:0007135!9.70e-15!57;UBERON:0002616!5.04e-13!59;UBERON:0002780!2.03e-12!41;UBERON:0001890!2.03e-12!41;UBERON:0006240!2.03e-12!41;UBERON:0003080!1.02e-11!42;UBERON:0001017!1.27e-10!82;UBERON:0000955!2.04e-10!69;UBERON:0006238!2.04e-10!69;UBERON:0001869!4.39e-10!32;UBERON:0005743!8.41e-10!86;UBERON:0002020!8.54e-10!34;UBERON:0003528!8.54e-10!34;UBERON:0001893!9.44e-10!34;UBERON:0002791!1.75e-09!33;UBERON:0003075!1.95e-09!86;UBERON:0007284!1.95e-09!86;UBERON:0002346!5.70e-09!90;UBERON:0000073!4.86e-08!94;UBERON:0001016!4.86e-08!94;UBERON:0003056!1.17e-07!61;UBERON:0002619!1.77e-07!22;UBERON:0000956!1.80e-07!25;UBERON:0000203!1.80e-07!25;UBERON:0001950!5.37e-07!20|ontology_enrichment_uberon_v019=UBERON:0000178;2.03e-23;15!UBERON:0000179;2.03e-23;15!UBERON:0000463;2.03e-23;15!UBERON:0002108;9.70e-12;4!UBERON:0000160;3.47e-11;17!UBERON:0002390;3.48e-09;32!UBERON:0005409;1.85e-08;22|ontology_enrichment_uberon_v019_2=UBERON:0000178,2.14e-23,15;UBERON:0000179,2.14e-23,15;UBERON:0000463,2.14e-23,15;UBERON:0002108,1.27e-11,4;UBERON:0000160,3.68e-11,17;UBERON:0007023,1.24e-09,114;UBERON:0005409,2.58e-07,25|phase1_expression=0.181678379270557,0,0,0,0,0,0,0,0.522371256399677,0.245733936501509,0,0,0.263766978228454,0.37129905888014,0.662794751455832,0.672325146451775,0,0,0.487932798790507,0.246242116153576,0.612002073732759,0,0.286235987131057,0.410623275218653,0.125542639594803,0.0764134057479513,0,0,0,0,0,0,0,0.369754010166788,0,0,0.293600439334847,0,0,0.217010870715852,0,0.32389366601898,0.77272670290256,1.01778767145695,1.13362783106643,0.242584061187816,0.929716147622738,0.411167888021826,0.309706370895104,0.28769239232215,0,0.945928919554341,0,0,0,0.376484679085209,0.545812300115692,0.224723484445085,0.306083892370903,0.320929027076094,0,0,0.598390972864896,0.426224750532694,0.290209238628584,0,0,0.502497330513487,0,0.217188844705117,0.605399502633369,0,0,0,0,0,0,0,0,0,0.19891667719909,0,0,0.546138611262131,0,0,0,0,0,0,0,0,0,0,0.560508562981536,0.263384084775077,0,0.393010762749165,0,0.167186495390678,0,0,0,0.111410456885174,0.883817722424512,0,0.541607727530031,0.128091319725675,0.260118695119756,0.328875809207352,0,0,0.14828656316206,0,0,0.226618685395132,0,0,0,0,0,1.90090408889675,0.150575119077773,0,0,0,1.64225599384209,0.201606743224732,0,0,0,0,0,0.361439152384566,0,0,0,0,0.189069634328136,0.221729397462564,0.175669571386252,0.327447688744282,0,0,0,0.522389211897802,0.398873881556595,0,0,0,0,0,0,0,0,0,0,0.775250277507987,0.71153252537342,0.33472061276467,0.402829317109147,0,0.24406205754817,0.367663080345869,0,0.267899184852239,0,0.112611480483322,0,0,0,0,3.87780264148325,0.436094052142534,0,0.25326102332916,0.132409180813219,0,0.354668382198357,0.560677600142307,0,0.24666754841716,0.311211035399766,0.269421344139376,0.490385709340376,0,0.576175924479999,0,0,0,0.448346041655403,0.704606991862589,0,0,0.408308342509787,0.122834317311768,0.206651562351531,0,1.48360157567134,0,0,0.336672227908132,0.250237039743928,0,0,0,0.150238058906597,0.340296549480063,0.179389635688862,0,0,0.600182192168805,0,0,0,0,0,0,0.276149695926898,0,0,0.10075209822764,0.169560592310488,0,0.272746120590835,0.286804595389004,0.243947412259191,0.397589304964456,0.116193942869518,0,0,0,0,0,0,0,0,0,0,0.241011029883482,0.220587945464788,0.217879444092406,0.237270619111097,0.539325232640658,0.196221465125346,0,0.738155454624648,1.40241773803446,0,0,0,0,0,0,0.122988438543114,0.171567810298526,0,0,0.100528972411631,0,0,0,0,0.231860809950154,0.234817388471643,0.288732895522148,0.462985512576611,0,0,0,0,0.234004265139238,0.297262324577456,0,0.335964256397719,0.141775097242386,0.179117045405697,0,0,0.492663237895943,0.264145302039678,0.414656231081544,0.144119953416961,0.25248486685276,0.190493682876507,0,0,0,0.411309970813294,0,1.14330573052231,0,0,0,0.258543431515556,3.57656445851882,0,0.531876233169741,0,0,0,0,0.142977993658148,0,0,0.325736184293735,0,0.791951872933429,0.301439377059586,0,0.099972991182057,0,0,2.10833939483032,0.239624855491583,0,1.42636905040718,0.144781306667579,0.410952645100767,0.358121926479791,0.224170287987055,0,0.2156275748595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| ||
|DPIdataset=robustDPI | |||
|EntrezGene=55071 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=novel_coding | |||
|HGNC=23433 | |||
|TSSclassifier=S | |||
|UniProt=Q8IXQ3 | |||
|association_with_transcript=471bp_to_BC039588_5end | |||
|coexpression_cluster_id=C14 | |||
|description=CAGE_peak_4_at_C9orf40_5end | |||
|id=chr9:77567221..77567264,- | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019=CL:0000764;1.38e-08;2!CL:0000558;1.38e-08;2 | |||
|ontology_enrichment_celltype_v019_2=CL:0000764,1.44e-08,2;CL:0000765,1.44e-08,2;CL:0000050,1.44e-08,2;CL:0000038,1.44e-08,2;CL:0000558,1.44e-08,2;CL:0000547,1.44e-08,2;CL:0000549,1.44e-08,2;CL:0000550,1.44e-08,2;CL:0000552,1.44e-08,2 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007023!1.85e-20!115;UBERON:0001049!9.70e-15!57;UBERON:0005068!9.70e-15!57;UBERON:0006241!9.70e-15!57;UBERON:0007135!9.70e-15!57;UBERON:0002616!5.04e-13!59;UBERON:0002780!2.03e-12!41;UBERON:0001890!2.03e-12!41;UBERON:0006240!2.03e-12!41;UBERON:0003080!1.02e-11!42;UBERON:0001017!1.27e-10!82;UBERON:0000955!2.04e-10!69;UBERON:0006238!2.04e-10!69;UBERON:0001869!4.39e-10!32;UBERON:0005743!8.41e-10!86;UBERON:0002020!8.54e-10!34;UBERON:0003528!8.54e-10!34;UBERON:0001893!9.44e-10!34;UBERON:0002791!1.75e-09!33;UBERON:0003075!1.95e-09!86;UBERON:0007284!1.95e-09!86;UBERON:0002346!5.70e-09!90;UBERON:0000073!4.86e-08!94;UBERON:0001016!4.86e-08!94;UBERON:0003056!1.17e-07!61;UBERON:0002619!1.77e-07!22;UBERON:0000956!1.80e-07!25;UBERON:0000203!1.80e-07!25;UBERON:0001950!5.37e-07!20 | |||
|ontology_enrichment_uberon_v019=UBERON:0000178;2.03e-23;15!UBERON:0000179;2.03e-23;15!UBERON:0000463;2.03e-23;15!UBERON:0002108;9.70e-12;4!UBERON:0000160;3.47e-11;17!UBERON:0002390;3.48e-09;32!UBERON:0005409;1.85e-08;22 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000178,2.14e-23,15;UBERON:0000179,2.14e-23,15;UBERON:0000463,2.14e-23,15;UBERON:0002108,1.27e-11,4;UBERON:0000160,3.68e-11,17;UBERON:0007023,1.24e-09,114;UBERON:0005409,2.58e-07,25 | |||
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| |||
|short_description=p4@C9orf40 | |||
}} |
Revision as of 09:25, 14 September 2013
Short description: | p4@C9orf40 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_4_at_C9orf40_5end |
Coexpression cluster: | C14_Whole_blood_Reticulocytes_liver_Neutrophils_Eosinophils_spleen |
Association with transcript: | 471bp_to_BC039588_5end |
EntrezGene: | C9orf40 |
HGNC: | 23433 |
UniProt: | Q8IXQ3 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
erythroid lineage cell | 1.44e-08 | 2 |
erythroblast | 1.44e-08 | 2 |
megakaryocyte-erythroid progenitor cell | 1.44e-08 | 2 |
erythroid progenitor cell | 1.44e-08 | 2 |
reticulocyte | 1.44e-08 | 2 |
proerythroblast | 1.44e-08 | 2 |
basophilic erythroblast | 1.44e-08 | 2 |
polychromatophilic erythroblast | 1.44e-08 | 2 |
orthochromatic erythroblast | 1.44e-08 | 2 |
Ontology term | p-value | n |
---|---|---|
blood | 2.14e-23 | 15 |
haemolymphatic fluid | 2.14e-23 | 15 |
organism substance | 2.14e-23 | 15 |
small intestine | 1.27e-11 | 4 |
intestine | 3.68e-11 | 17 |
adult organism | 1.24e-09 | 114 |
gastrointestinal system | 2.58e-07 | 25 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.