FFCP PHASE1:Hg19::chr8:6334788..6334803,+: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=79648|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding|HGNC=6954|TSSclassifier=S|UniProt=|association_with_transcript=1bp_to_ENST00000519221_5end|coexpression_cluster_id=C46|description=CAGE_peak_2_at_MCPH1_5end|id=chr8:6334788..6334803,+|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019=|ontology_enrichment_celltype_v019_2=|ontology_enrichment_development_v019=UBERON:0006965;6.30e-21;2!UBERON:0004872;6.21e-07;7|ontology_enrichment_disease=|ontology_enrichment_disease_v019=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0004177!4.63e-11!7;UBERON:0002370!2.35e-09!4;UBERON:0005058!2.35e-09!4;UBERON:0009113!2.35e-09!4;UBERON:0003295!2.35e-09!4;UBERON:0005562!2.35e-09!4;UBERON:0002363!5.72e-09!1;UBERON:0007647!5.72e-09!1;UBERON:0010115!5.72e-09!1;UBERON:0000974!4.62e-08!10;UBERON:0003408!5.86e-08!10;UBERON:0005174!1.60e-07!5;UBERON:0001137!1.60e-07!5|ontology_enrichment_uberon_v019=UBERON:0002370;2.34e-79;2!UBERON:0005058;2.34e-79;2!UBERON:0009113;2.34e-79;2!UBERON:0004177;1.44e-32;5!UBERON:0005057;1.44e-32;5!UBERON:0000077;6.82e-07;27!UBERON:0002405;6.82e-07;27|ontology_enrichment_uberon_v019_2=UBERON:0002370,2.22e-40,4;UBERON:0005058,2.22e-40,4;UBERON:0009113,2.22e-40,4;UBERON:0003295,2.22e-40,4;UBERON:0005562,2.22e-40,4;UBERON:0003351,2.38e-27,6;UBERON:0004177,1.28e-23,7;UBERON:0005057,1.28e-23,7;UBERON:0000974,6.93e-17,10;UBERON:0003408,6.93e-17,10;UBERON:0001042,6.93e-17,10;UBERON:0009145,6.93e-17,10;UBERON:0006562,1.88e-15,11;UBERON:0009722,1.88e-15,11;UBERON:0007690,1.88e-15,11;UBERON:0008814,7.42e-10,18;UBERON:0001557,2.17e-09,19|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.662794751455832,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.272906150057846,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.130059347559878,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.311211035399766,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.252433774244115,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.7658523976586,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0895585227028483,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.142977993658148,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.167516265334349,0,0,0,0,0.12269149171914,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.286249773483982,0,0.316379424718726,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,32.6541060969221,0.159426272728822,0,0,0,0,0.280797178113459,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.19924798825107,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.291604613383254,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.063186579628488,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.17071847709395,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.4226557275834,0,0,0.0644578879735772,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.476128862927481,20.2809176885059,18.6224142887574,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.00636896795513,0|short_description=p2@MCPH1}} | ||
|DPIdataset=robustDPI | |||
|EntrezGene=79648 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=6954 | |||
|TSSclassifier=S | |||
|UniProt= | |||
|association_with_transcript=1bp_to_ENST00000519221_5end | |||
|coexpression_cluster_id=C46 | |||
|description=CAGE_peak_2_at_MCPH1_5end | |||
|id=chr8:6334788..6334803,+ | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019=UBERON:0006965;6.30e-21;2!UBERON:0004872;6.21e-07;7 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0004177!4.63e-11!7;UBERON:0002370!2.35e-09!4;UBERON:0005058!2.35e-09!4;UBERON:0009113!2.35e-09!4;UBERON:0003295!2.35e-09!4;UBERON:0005562!2.35e-09!4;UBERON:0002363!5.72e-09!1;UBERON:0007647!5.72e-09!1;UBERON:0010115!5.72e-09!1;UBERON:0000974!4.62e-08!10;UBERON:0003408!5.86e-08!10;UBERON:0005174!1.60e-07!5;UBERON:0001137!1.60e-07!5 | |||
|ontology_enrichment_uberon_v019=UBERON:0002370;2.34e-79;2!UBERON:0005058;2.34e-79;2!UBERON:0009113;2.34e-79;2!UBERON:0004177;1.44e-32;5!UBERON:0005057;1.44e-32;5!UBERON:0000077;6.82e-07;27!UBERON:0002405;6.82e-07;27 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002370,2.22e-40,4;UBERON:0005058,2.22e-40,4;UBERON:0009113,2.22e-40,4;UBERON:0003295,2.22e-40,4;UBERON:0005562,2.22e-40,4;UBERON:0003351,2.38e-27,6;UBERON:0004177,1.28e-23,7;UBERON:0005057,1.28e-23,7;UBERON:0000974,6.93e-17,10;UBERON:0003408,6.93e-17,10;UBERON:0001042,6.93e-17,10;UBERON:0009145,6.93e-17,10;UBERON:0006562,1.88e-15,11;UBERON:0009722,1.88e-15,11;UBERON:0007690,1.88e-15,11;UBERON:0008814,7.42e-10,18;UBERON:0001557,2.17e-09,19 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.662794751455832,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.272906150057846,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.130059347559878,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.311211035399766,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.252433774244115,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.7658523976586,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0895585227028483,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.142977993658148,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.167516265334349,0,0,0,0,0.12269149171914,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.286249773483982,0,0.316379424718726,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,32.6541060969221,0.159426272728822,0,0,0,0,0.280797178113459,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.19924798825107,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.291604613383254,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.063186579628488,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.17071847709395,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.4226557275834,0,0,0.0644578879735772,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.476128862927481,20.2809176885059,18.6224142887574,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.00636896795513,0 | |||
|short_description=p2@MCPH1 | |||
}} |
Revision as of 05:45, 14 September 2013
Short description: | p2@MCPH1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_2_at_MCPH1_5end |
Coexpression cluster: | C46_acute_Hodgkin_thymus_CD8_chronic_CD4_merkel |
Association with transcript: | 1bp_to_ENST00000519221_5end |
EntrezGene: | MCPH1 |
HGNC: | 6954 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
thymus | 2.22e-40 | 4 |
hemolymphoid system gland | 2.22e-40 | 4 |
thymic region | 2.22e-40 | 4 |
pharyngeal gland | 2.22e-40 | 4 |
thymus primordium | 2.22e-40 | 4 |
pharyngeal epithelium | 2.38e-27 | 6 |
hemopoietic organ | 1.28e-23 | 7 |
immune organ | 1.28e-23 | 7 |
neck | 6.93e-17 | 10 |
gland of gut | 6.93e-17 | 10 |
chordate pharynx | 6.93e-17 | 10 |
pharyngeal region of foregut | 6.93e-17 | 10 |
pharynx | 1.88e-15 | 11 |
entire pharyngeal arch endoderm | 1.88e-15 | 11 |
early pharyngeal endoderm | 1.88e-15 | 11 |
pharyngeal arch system | 7.42e-10 | 18 |
upper respiratory tract | 2.17e-09 | 19 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.