FFCP PHASE1:Hg19::chr7:107883640..107883652,-: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=4897|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding|HGNC=7994|TSSclassifier=S|UniProt=C9JH43|association_with_transcript=31bp_to_ENST00000417701_5end|coexpression_cluster_id=C445|description=CAGE_peak_21_at_NRCAM_5end|id=chr7:107883640..107883652,-|ontology_enrichment_celltype=CL:0000064!8.78e-26!3;CL:0005012!8.78e-26!3;CL:0000067!8.78e-26!3;CL:0002304!8.78e-26!3|ontology_enrichment_celltype_v019=CL:0000064;1.83e-14;3!CL:0000067;1.83e-14;3!CL:0005012;1.83e-14;3!CL:0002304;1.83e-14;3!CL:0000306;3.42e-11;4!CL:0002222;3.42e-11;4!CL:0002224;3.42e-11;4!CL:0000075;7.45e-07;27|ontology_enrichment_celltype_v019_2=CL:0000064,1.60e-14,3;CL:0000067,1.60e-14,3;CL:0005012,1.60e-14,3;CL:0002304,1.60e-14,3;CL:0000306,3.79e-11,4;CL:0002222,3.79e-11,4;CL:0002224,3.79e-11,4;CL:0000075,7.45e-07,27|ontology_enrichment_development_v019=UBERON:0006222;9.91e-41;1|ontology_enrichment_disease=|ontology_enrichment_disease_v019=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0003075!6.28e-28!86;UBERON:0007284!6.28e-28!86;UBERON:0002346!1.44e-26!90;UBERON:0001778!8.78e-26!3;UBERON:0001775!8.78e-26!3;UBERON:0001017!1.60e-19!82;UBERON:0000488!1.67e-19!4;UBERON:0001049!1.52e-18!57;UBERON:0005068!1.52e-18!57;UBERON:0006241!1.52e-18!57;UBERON:0007135!1.52e-18!57;UBERON:0005743!1.62e-18!86;UBERON:0002616!7.35e-18!59;UBERON:0000955!1.96e-17!69;UBERON:0006238!1.96e-17!69;UBERON:0003056!2.11e-17!61;UBERON:0000073!1.48e-16!94;UBERON:0001016!1.48e-16!94;UBERON:0000033!2.99e-16!123;UBERON:0004121!5.05e-16!169;UBERON:0000924!1.39e-15!173;UBERON:0006601!1.39e-15!173;UBERON:0000153!2.27e-15!129;UBERON:0007811!2.27e-15!129;UBERON:0007023!1.42e-13!115;UBERON:0002203!3.36e-13!6;UBERON:0001768!3.36e-13!6;UBERON:0007625!1.57e-12!11;UBERON:0001896!3.57e-12!3;UBERON:0005290!3.57e-12!3;UBERON:0010096!3.57e-12!3;UBERON:0002780!1.07e-11!41;UBERON:0001890!1.07e-11!41;UBERON:0006240!1.07e-11!41;UBERON:0003080!2.12e-11!42;UBERON:0009663!2.77e-11!7;UBERON:0004733!3.49e-11!12;UBERON:0002028!3.49e-11!12;UBERON:0007277!3.49e-11!12;UBERON:0004732!2.45e-10!13;UBERON:0002336!6.88e-10!1;UBERON:0001018!6.88e-10!1;UBERON:0002473!6.88e-10!1;UBERON:0005340!6.88e-10!1;UBERON:0002316!6.88e-10!1;UBERON:0003544!6.88e-10!1;UBERON:0001020!6.88e-10!1;UBERON:0005970!6.88e-10!1;UBERON:0002437!6.88e-10!1;UBERON:0001801!7.00e-10!14;UBERON:0002298!7.15e-10!8;UBERON:0002135!8.17e-10!1;UBERON:0001882!1.62e-09!1;UBERON:0005403!1.62e-09!1;UBERON:0000369!2.46e-09!4;UBERON:0002435!2.46e-09!4;UBERON:0000204!2.46e-09!4;UBERON:0010082!2.46e-09!4;UBERON:0003076!5.56e-09!15;UBERON:0003057!5.56e-09!15;UBERON:0002308!6.86e-09!9;UBERON:0002420!6.86e-09!9;UBERON:0000125!6.86e-09!9;UBERON:0007245!6.86e-09!9;UBERON:0010009!6.86e-09!9;UBERON:0010011!6.86e-09!9;UBERON:0000454!6.86e-09!9;UBERON:0002791!2.60e-08!33;UBERON:0001893!4.63e-08!34;UBERON:0002200!2.00e-07!11;UBERON:0006876!2.00e-07!11;UBERON:0000483!2.13e-07!309;UBERON:0000019!2.58e-07!19;UBERON:0000047!2.58e-07!19;UBERON:0004088!2.58e-07!19;UBERON:0003072!2.58e-07!19;UBERON:0003071!2.58e-07!19;UBERON:0004128!2.58e-07!19;UBERON:0000119!2.71e-07!312;UBERON:0000970!5.93e-07!20;UBERON:0000064!7.55e-07!219|ontology_enrichment_uberon_v019=UBERON:0007625;2.33e-15;11!UBERON:0001896;1.83e-14;3!UBERON:0001778;1.83e-14;3!UBERON:0001775;1.83e-14;3!UBERON:0005290;1.83e-14;3!UBERON:0001801;2.66e-12;14!UBERON:0010077;3.42e-11;4!UBERON:0005389;3.42e-11;4!UBERON:0000488;3.42e-11;4!UBERON:0000484;3.42e-11;4!UBERON:0000965;3.42e-11;4!UBERON:0001803;3.42e-11;4!UBERON:0000019;2.46e-09;19!UBERON:0000047;2.46e-09;19!UBERON:0004088;2.46e-09;19!UBERON:0010230;2.46e-09;19!UBERON:0000970;6.42e-09;20!UBERON:0002104;1.53e-08;21!UBERON:0001456;1.53e-08;21!UBERON:0002203;6.78e-08;6!UBERON:0001768;6.78e-08;6!UBERON:0002200;6.78e-08;6!UBERON:0002298;6.78e-08;6!UBERON:0000020;6.98e-08;23!UBERON:0001032;1.36e-07;24!UBERON:0004456;1.36e-07;24!UBERON:0001894;5.38e-07;7|ontology_enrichment_uberon_v019_2=UBERON:0007625,2.33e-15,11;UBERON:0001778,1.60e-14,3;UBERON:0001775,1.60e-14,3;UBERON:0001896,1.83e-14,3;UBERON:0005290,1.83e-14,3;UBERON:0010096,1.83e-14,3;UBERON:0001801,2.66e-12,14;UBERON:0000488,3.10e-11,4;UBERON:0010077,3.79e-11,4;UBERON:0005389,3.79e-11,4;UBERON:0000484,3.79e-11,4;UBERON:0002546,3.79e-11,4;UBERON:0000965,3.79e-11,4;UBERON:0001803,3.79e-11,4;UBERON:0003073,3.79e-11,4;UBERON:0005426,3.79e-11,4;UBERON:0000019,6.42e-09,20;UBERON:0000047,6.42e-09,20;UBERON:0010312,6.42e-09,20;UBERON:0004088,6.42e-09,20;UBERON:0010230,6.42e-09,20;UBERON:0003072,6.42e-09,20;UBERON:0004128,6.42e-09,20;UBERON:0003071,6.42e-09,20;UBERON:0000970,1.53e-08,21;UBERON:0002104,1.53e-08,21;UBERON:0003075,2.75e-08,82;UBERON:0007284,2.75e-08,82;UBERON:0001456,3.39e-08,22;UBERON:0002346,6.20e-08,86;UBERON:0002203,6.34e-08,6;UBERON:0001768,6.34e-08,6;UBERON:0002200,6.34e-08,6;UBERON:0002298,6.78e-08,6;UBERON:0000020,1.36e-07,24;UBERON:0001032,1.36e-07,24;UBERON:0004456,1.36e-07,24;UBERON:0001894,5.38e-07,7;UBERON:0006222,5.38e-07,7|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.41802225746102,0.443458794925128,0.087834785693126,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.15930404975077,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.167516265334349,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.211107635297664,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0927680981618513,0,0,0,0,0,0,0,0,0,0,0.885741385813839,0,0,0.110579259931225,0,0.219385397153973,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.471807930864739,0,3.04543779442941,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.171594997861965,0,0,0,0,0,0,0,0,0.136905378891993,0,0,0,0.279282401272254,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,13.3447733549777,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.110929051536852,1.30402446176905,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.138258436151731,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.128458450192919,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0634158101939068,0,0,0,0,0,0,0,0,0,0,0,0,0.0679697329768317,0,0,0,0,0,0,0,0,0,0,0,0.23248285073625,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.829169439458779,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0|short_description=p21@NRCAM}} | ||
|DPIdataset=robustDPI | |||
|EntrezGene=4897 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=7994 | |||
|TSSclassifier=S | |||
|UniProt=C9JH43 | |||
|association_with_transcript=31bp_to_ENST00000417701_5end | |||
|coexpression_cluster_id=C445 | |||
|description=CAGE_peak_21_at_NRCAM_5end | |||
|id=chr7:107883640..107883652,- | |||
|ontology_enrichment_celltype=CL:0000064!8.78e-26!3;CL:0005012!8.78e-26!3;CL:0000067!8.78e-26!3;CL:0002304!8.78e-26!3 | |||
|ontology_enrichment_celltype_v019=CL:0000064;1.83e-14;3!CL:0000067;1.83e-14;3!CL:0005012;1.83e-14;3!CL:0002304;1.83e-14;3!CL:0000306;3.42e-11;4!CL:0002222;3.42e-11;4!CL:0002224;3.42e-11;4!CL:0000075;7.45e-07;27 | |||
|ontology_enrichment_celltype_v019_2=CL:0000064,1.60e-14,3;CL:0000067,1.60e-14,3;CL:0005012,1.60e-14,3;CL:0002304,1.60e-14,3;CL:0000306,3.79e-11,4;CL:0002222,3.79e-11,4;CL:0002224,3.79e-11,4;CL:0000075,7.45e-07,27 | |||
|ontology_enrichment_development_v019=UBERON:0006222;9.91e-41;1 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0003075!6.28e-28!86;UBERON:0007284!6.28e-28!86;UBERON:0002346!1.44e-26!90;UBERON:0001778!8.78e-26!3;UBERON:0001775!8.78e-26!3;UBERON:0001017!1.60e-19!82;UBERON:0000488!1.67e-19!4;UBERON:0001049!1.52e-18!57;UBERON:0005068!1.52e-18!57;UBERON:0006241!1.52e-18!57;UBERON:0007135!1.52e-18!57;UBERON:0005743!1.62e-18!86;UBERON:0002616!7.35e-18!59;UBERON:0000955!1.96e-17!69;UBERON:0006238!1.96e-17!69;UBERON:0003056!2.11e-17!61;UBERON:0000073!1.48e-16!94;UBERON:0001016!1.48e-16!94;UBERON:0000033!2.99e-16!123;UBERON:0004121!5.05e-16!169;UBERON:0000924!1.39e-15!173;UBERON:0006601!1.39e-15!173;UBERON:0000153!2.27e-15!129;UBERON:0007811!2.27e-15!129;UBERON:0007023!1.42e-13!115;UBERON:0002203!3.36e-13!6;UBERON:0001768!3.36e-13!6;UBERON:0007625!1.57e-12!11;UBERON:0001896!3.57e-12!3;UBERON:0005290!3.57e-12!3;UBERON:0010096!3.57e-12!3;UBERON:0002780!1.07e-11!41;UBERON:0001890!1.07e-11!41;UBERON:0006240!1.07e-11!41;UBERON:0003080!2.12e-11!42;UBERON:0009663!2.77e-11!7;UBERON:0004733!3.49e-11!12;UBERON:0002028!3.49e-11!12;UBERON:0007277!3.49e-11!12;UBERON:0004732!2.45e-10!13;UBERON:0002336!6.88e-10!1;UBERON:0001018!6.88e-10!1;UBERON:0002473!6.88e-10!1;UBERON:0005340!6.88e-10!1;UBERON:0002316!6.88e-10!1;UBERON:0003544!6.88e-10!1;UBERON:0001020!6.88e-10!1;UBERON:0005970!6.88e-10!1;UBERON:0002437!6.88e-10!1;UBERON:0001801!7.00e-10!14;UBERON:0002298!7.15e-10!8;UBERON:0002135!8.17e-10!1;UBERON:0001882!1.62e-09!1;UBERON:0005403!1.62e-09!1;UBERON:0000369!2.46e-09!4;UBERON:0002435!2.46e-09!4;UBERON:0000204!2.46e-09!4;UBERON:0010082!2.46e-09!4;UBERON:0003076!5.56e-09!15;UBERON:0003057!5.56e-09!15;UBERON:0002308!6.86e-09!9;UBERON:0002420!6.86e-09!9;UBERON:0000125!6.86e-09!9;UBERON:0007245!6.86e-09!9;UBERON:0010009!6.86e-09!9;UBERON:0010011!6.86e-09!9;UBERON:0000454!6.86e-09!9;UBERON:0002791!2.60e-08!33;UBERON:0001893!4.63e-08!34;UBERON:0002200!2.00e-07!11;UBERON:0006876!2.00e-07!11;UBERON:0000483!2.13e-07!309;UBERON:0000019!2.58e-07!19;UBERON:0000047!2.58e-07!19;UBERON:0004088!2.58e-07!19;UBERON:0003072!2.58e-07!19;UBERON:0003071!2.58e-07!19;UBERON:0004128!2.58e-07!19;UBERON:0000119!2.71e-07!312;UBERON:0000970!5.93e-07!20;UBERON:0000064!7.55e-07!219 | |||
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|short_description=p21@NRCAM | |||
}} |
Revision as of 22:41, 13 September 2013
Short description: | p21@NRCAM |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_21_at_NRCAM_5end |
Coexpression cluster: | C445_lung_Lens_Ciliary_diencephalon_thalamus_bile_hepatoma |
Association with transcript: | 31bp_to_ENST00000417701_5end |
EntrezGene: | NRCAM |
HGNC: | 7994 |
UniProt: | C9JH43 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
ciliated cell | 1.60e-14 | 3 |
ciliated epithelial cell | 1.60e-14 | 3 |
multi-ciliated epithelial cell | 1.60e-14 | 3 |
non-pigmented ciliary epithelial cell | 1.60e-14 | 3 |
crystallin accumulating cell | 3.79e-11 | 4 |
vertebrate lens cell | 3.79e-11 | 4 |
lens epithelial cell | 3.79e-11 | 4 |
columnar/cuboidal epithelial cell | 7.45e-07 | 27 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.