FFCP PHASE1:Hg19::chr7:99817566..99817579,+: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=79037|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=novel_coding|HGNC=32190|TSSclassifier=S|UniProt=|association_with_transcript=31bp_to_BC032113_5end|coexpression_cluster_id=C1622|description=CAGE_peak_1_at_PVRIG_5end|id=chr7:99817566..99817579,+|ontology_enrichment_celltype=CL:0000542!1.49e-50!53;CL:0000051!1.49e-50!53;CL:0000838!3.10e-49!52;CL:0002087!5.50e-35!119;CL:0000738!6.27e-32!140;CL:0002031!2.00e-27!124;CL:0000084!5.12e-27!25;CL:0000827!5.12e-27!25;CL:0000791!1.10e-25!18;CL:0000789!1.10e-25!18;CL:0002420!1.10e-25!18;CL:0002419!1.10e-25!18;CL:0000790!1.10e-25!18;CL:0000037!1.91e-22!172;CL:0000566!1.91e-22!172;CL:0000988!3.40e-20!182;CL:0002032!4.95e-20!165;CL:0000837!4.95e-20!165;CL:0000625!6.89e-19!11;CL:0000945!1.05e-18!24;CL:0000826!1.05e-18!24;CL:0000236!3.06e-13!14;CL:0000624!4.90e-07!6|ontology_enrichment_celltype_v019=CL:0000084;6.11e-37;25!CL:0000791;2.05e-36;18!CL:0000789;2.05e-36;18!CL:0002419;2.05e-36;18!CL:0000542;3.84e-35;53!CL:0000625;9.18e-28;11!CL:0000236;2.96e-18;13!CL:0000945;1.52e-16;24!CL:0000623;2.62e-10;3!CL:0000898;9.95e-10;3!CL:0002087;2.49e-09;104!CL:0000624;3.60e-08;6!CL:0000815;6.09e-07;2!CL:0000792;6.09e-07;2!CL:0002677;6.09e-07;2|ontology_enrichment_celltype_v019_2=CL:0000838,1.87e-58,52;CL:0000542,3.52e-57,53;CL:0000051,3.52e-57,53;CL:0000084,4.29e-37,25;CL:0000827,4.29e-37,25;CL:0000791,1.44e-36,18;CL:0000789,1.44e-36,18;CL:0002420,1.44e-36,18;CL:0002419,1.44e-36,18;CL:0000790,1.44e-36,18;CL:0000625,6.03e-28,11;CL:0002087,3.88e-26,115;CL:0002031,5.89e-23,120;CL:0000738,3.91e-22,136;CL:0000236,9.38e-17,14;CL:0000945,1.80e-16,24;CL:0000826,1.80e-16,24;CL:0000037,3.75e-16,168;CL:0002032,7.14e-15,161;CL:0000837,7.14e-15,161;CL:0000988,7.24e-15,177;CL:0000623,3.95e-10,3;CL:0000825,3.95e-10,3;CL:0000898,8.83e-10,3;CL:0000624,3.68e-08,6;CL:0000893,1.37e-07,2;CL:0002489,1.37e-07,2;CL:0000809,1.37e-07,2;CL:0000808,1.37e-07,2;CL:0000894,1.37e-07,2;CL:0000806,1.37e-07,2;CL:0000807,1.37e-07,2;CL:0000805,1.37e-07,2;CL:0002425,1.37e-07,2;CL:0000815,5.32e-07,2;CL:0000792,5.32e-07,2;CL:0002677,5.32e-07,2|ontology_enrichment_development_v019=CL:0000790;2.05e-36;18!CL:0000051;3.84e-35;53!CL:0002425;1.35e-07;2|ontology_enrichment_disease=|ontology_enrichment_disease_v019=DOID:0060058;6.57e-08;10|ontology_enrichment_disease_v019_2=DOID:0060058,7.63e-08,10|ontology_enrichment_uberon=UBERON:0000178!2.41e-14!15;UBERON:0000179!2.41e-14!15;UBERON:0000463!2.41e-14!15;UBERON:0004177!1.54e-09!7;UBERON:0002370!2.04e-08!4;UBERON:0005058!2.04e-08!4;UBERON:0009113!2.04e-08!4;UBERON:0003295!2.04e-08!4;UBERON:0005562!2.04e-08!4;UBERON:0002390!7.29e-08!102;UBERON:0003061!7.29e-08!102;UBERON:0002193!8.01e-08!112|ontology_enrichment_uberon_v019=UBERON:0000178;2.79e-15;15!UBERON:0000179;2.79e-15;15!UBERON:0000463;2.79e-15;15!UBERON:0002390;4.41e-12;32!UBERON:0004177;1.06e-10;5!UBERON:0005057;1.06e-10;5!UBERON:0002193;6.67e-09;42!UBERON:0002370;3.91e-08;2!UBERON:0005058;3.91e-08;2!UBERON:0009113;3.91e-08;2|ontology_enrichment_uberon_v019_2=UBERON:0004177,1.88e-16,7;UBERON:0005057,1.88e-16,7;UBERON:0000178,2.66e-15,15;UBERON:0000179,2.66e-15,15;UBERON:0000463,2.66e-15,15;UBERON:0002370,4.92e-14,4;UBERON:0005058,4.92e-14,4;UBERON:0009113,4.92e-14,4;UBERON:0003295,4.92e-14,4;UBERON:0005562,4.92e-14,4;UBERON:0003351,2.42e-09,6;UBERON:0001042,4.53e-08,10;UBERON:0009145,4.53e-08,10;UBERON:0006562,2.68e-07,11|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.382067028739756,0.656804715599566,0.314843125254717,0.393364276848904,0.383829398097213,0.928896739896456,0,0,0,16.2681121218633,1.27952309238679,0,1.10799081706375,0.200544447470142,0.868043482863407,0.223915474239924,0.971680998056939,0,0,0,0.242584061187816,0.232429036905685,0.411167888021826,0,0,0,0,0,1.29096936716765,0,0.188242339542605,0,0,0,0,0,0,0.199463657621632,0,0.290209238628584,0,0,0,0,0.217188844705117,0,0,0.316462387440884,0,0,0,0,0,0,0,0,0,3.51992488922645,1.09227722252426,0,5.54749289336459,2.40237592221607,1.14950487990897,3.30522436392431,0.954053754535364,0,2.93618594685469,3.44045905312706,0,0,0.790152254325231,0.590129310341499,0,1.23360899399706,1.83905144929746,2.28145586643513,0.946895611469467,3.89653456815823,1.6711568532776,1.76763544484902,1.10766947291811,0.812411591295047,1.92136979588513,2.21100890851793,1.80881695064044,0.829050053357545,1.44901542867526,0.741432815810302,0,0,0.906474741580529,2.29932296161153,2.06176467289578,1.26509846009751,2.86708872891687,7.1619179924206,5.70271226669025,3.01150238155546,3.07167866770604,3.74792179657038,5.20909954496837,2.46338399076314,0.80642697289893,1.60464117470104,2.89648807765598,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.238490624305342,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.18157981336281,2.20731549707325,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0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| ||
|DPIdataset=robustDPI | |||
|EntrezGene=79037 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=novel_coding | |||
|HGNC=32190 | |||
|TSSclassifier=S | |||
|UniProt= | |||
|association_with_transcript=31bp_to_BC032113_5end | |||
|coexpression_cluster_id=C1622 | |||
|description=CAGE_peak_1_at_PVRIG_5end | |||
|id=chr7:99817566..99817579,+ | |||
|ontology_enrichment_celltype=CL:0000542!1.49e-50!53;CL:0000051!1.49e-50!53;CL:0000838!3.10e-49!52;CL:0002087!5.50e-35!119;CL:0000738!6.27e-32!140;CL:0002031!2.00e-27!124;CL:0000084!5.12e-27!25;CL:0000827!5.12e-27!25;CL:0000791!1.10e-25!18;CL:0000789!1.10e-25!18;CL:0002420!1.10e-25!18;CL:0002419!1.10e-25!18;CL:0000790!1.10e-25!18;CL:0000037!1.91e-22!172;CL:0000566!1.91e-22!172;CL:0000988!3.40e-20!182;CL:0002032!4.95e-20!165;CL:0000837!4.95e-20!165;CL:0000625!6.89e-19!11;CL:0000945!1.05e-18!24;CL:0000826!1.05e-18!24;CL:0000236!3.06e-13!14;CL:0000624!4.90e-07!6 | |||
|ontology_enrichment_celltype_v019=CL:0000084;6.11e-37;25!CL:0000791;2.05e-36;18!CL:0000789;2.05e-36;18!CL:0002419;2.05e-36;18!CL:0000542;3.84e-35;53!CL:0000625;9.18e-28;11!CL:0000236;2.96e-18;13!CL:0000945;1.52e-16;24!CL:0000623;2.62e-10;3!CL:0000898;9.95e-10;3!CL:0002087;2.49e-09;104!CL:0000624;3.60e-08;6!CL:0000815;6.09e-07;2!CL:0000792;6.09e-07;2!CL:0002677;6.09e-07;2 | |||
|ontology_enrichment_celltype_v019_2=CL:0000838,1.87e-58,52;CL:0000542,3.52e-57,53;CL:0000051,3.52e-57,53;CL:0000084,4.29e-37,25;CL:0000827,4.29e-37,25;CL:0000791,1.44e-36,18;CL:0000789,1.44e-36,18;CL:0002420,1.44e-36,18;CL:0002419,1.44e-36,18;CL:0000790,1.44e-36,18;CL:0000625,6.03e-28,11;CL:0002087,3.88e-26,115;CL:0002031,5.89e-23,120;CL:0000738,3.91e-22,136;CL:0000236,9.38e-17,14;CL:0000945,1.80e-16,24;CL:0000826,1.80e-16,24;CL:0000037,3.75e-16,168;CL:0002032,7.14e-15,161;CL:0000837,7.14e-15,161;CL:0000988,7.24e-15,177;CL:0000623,3.95e-10,3;CL:0000825,3.95e-10,3;CL:0000898,8.83e-10,3;CL:0000624,3.68e-08,6;CL:0000893,1.37e-07,2;CL:0002489,1.37e-07,2;CL:0000809,1.37e-07,2;CL:0000808,1.37e-07,2;CL:0000894,1.37e-07,2;CL:0000806,1.37e-07,2;CL:0000807,1.37e-07,2;CL:0000805,1.37e-07,2;CL:0002425,1.37e-07,2;CL:0000815,5.32e-07,2;CL:0000792,5.32e-07,2;CL:0002677,5.32e-07,2 | |||
|ontology_enrichment_development_v019=CL:0000790;2.05e-36;18!CL:0000051;3.84e-35;53!CL:0002425;1.35e-07;2 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019=DOID:0060058;6.57e-08;10 | |||
|ontology_enrichment_disease_v019_2=DOID:0060058,7.63e-08,10 | |||
|ontology_enrichment_uberon=UBERON:0000178!2.41e-14!15;UBERON:0000179!2.41e-14!15;UBERON:0000463!2.41e-14!15;UBERON:0004177!1.54e-09!7;UBERON:0002370!2.04e-08!4;UBERON:0005058!2.04e-08!4;UBERON:0009113!2.04e-08!4;UBERON:0003295!2.04e-08!4;UBERON:0005562!2.04e-08!4;UBERON:0002390!7.29e-08!102;UBERON:0003061!7.29e-08!102;UBERON:0002193!8.01e-08!112 | |||
|ontology_enrichment_uberon_v019=UBERON:0000178;2.79e-15;15!UBERON:0000179;2.79e-15;15!UBERON:0000463;2.79e-15;15!UBERON:0002390;4.41e-12;32!UBERON:0004177;1.06e-10;5!UBERON:0005057;1.06e-10;5!UBERON:0002193;6.67e-09;42!UBERON:0002370;3.91e-08;2!UBERON:0005058;3.91e-08;2!UBERON:0009113;3.91e-08;2 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0004177,1.88e-16,7;UBERON:0005057,1.88e-16,7;UBERON:0000178,2.66e-15,15;UBERON:0000179,2.66e-15,15;UBERON:0000463,2.66e-15,15;UBERON:0002370,4.92e-14,4;UBERON:0005058,4.92e-14,4;UBERON:0009113,4.92e-14,4;UBERON:0003295,4.92e-14,4;UBERON:0005562,4.92e-14,4;UBERON:0003351,2.42e-09,6;UBERON:0001042,4.53e-08,10;UBERON:0009145,4.53e-08,10;UBERON:0006562,2.68e-07,11 | |||
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|short_description=p1@PVRIG | |||
}} |
Revision as of 02:47, 14 September 2013
Short description: | p1@PVRIG |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_1_at_PVRIG_5end |
Coexpression cluster: | C1622_thymus_CD8_Natural_vein_blood_acute_Basophils |
Association with transcript: | 31bp_to_BC032113_5end |
EntrezGene: | PVRIG |
HGNC: | 32190 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
hemopoietic organ | 1.88e-16 | 7 |
immune organ | 1.88e-16 | 7 |
blood | 2.66e-15 | 15 |
haemolymphatic fluid | 2.66e-15 | 15 |
organism substance | 2.66e-15 | 15 |
thymus | 4.92e-14 | 4 |
hemolymphoid system gland | 4.92e-14 | 4 |
thymic region | 4.92e-14 | 4 |
pharyngeal gland | 4.92e-14 | 4 |
thymus primordium | 4.92e-14 | 4 |
pharyngeal epithelium | 2.42e-09 | 6 |
chordate pharynx | 4.53e-08 | 10 |
pharyngeal region of foregut | 4.53e-08 | 10 |
pharynx | 2.68e-07 | 11 |
Ontology term | p-value | n |
---|---|---|
lymphoma | 7.63e-08 | 10 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.