FFCP PHASE1:Hg19::chr7:989361..989377,-: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=NA|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript|HGNC=NA|TSSclassifier=N|UniProt=NA|association_with_transcript=NA|description=CAGE_peak_at_chr7:989361..989377,-|id=chr7:989361..989377,-|ontology_enrichment_celltype=CL:0000066!1.60e-10!254;CL:0002327!1.98e-10!4;CL:0000239!8.51e-07!3;CL:1000615!8.51e-07!3;CL:0002306!8.51e-07!3|ontology_enrichment_celltype_v019=CL:0000313;5.13e-19;1!CL:0000159;3.42e-10;2!CL:0002535;3.42e-10;2!CL:0000082;3.10e-09;19!CL:0000322;2.25e-07;3|ontology_enrichment_celltype_v019_2=CL:0000313,4.69e-19,1;CL:0000159,3.27e-10,2;CL:0002535,3.58e-10,2;CL:0000082,3.33e-09,19;CL:0000066,6.20e-08,253;CL:0000322,2.32e-07,3|ontology_enrichment_development_v019=UBERON:0008814;2.60e-10;2!UBERON:0010056;2.60e-10;2!UBERON:0001041;5.33e-10;30!UBERON:0009117;4.34e-08;10!UBERON:0005564;4.34e-08;10|ontology_enrichment_disease=DOID:299!1.69e-19!25;DOID:305!1.81e-18!106;DOID:1749!7.73e-15!14;DOID:0050687!3.26e-12!143;DOID:3493!3.63e-10!2;DOID:4929!7.07e-10!2|ontology_enrichment_disease_v019=DOID:1749;7.33e-21;14!DOID:3111;2.97e-19;1!DOID:3603;2.97e-19;1!DOID:2152;5.13e-19;1!DOID:299;3.42e-18;25!DOID:3908;1.40e-15;5!DOID:1324;1.55e-11;15!DOID:305;4.15e-11;106!DOID:0050615;7.46e-11;16!DOID:4468;1.43e-10;2!DOID:3493;1.64e-10;2!DOID:3910;1.98e-10;2!DOID:3905;4.43e-09;9!DOID:4556;1.99e-07;3|ontology_enrichment_disease_v019_2=DOID:1749,8.13e-21,14;DOID:305,6.29e-20,106;DOID:3111,2.25e-19,1;DOID:3603,2.25e-19,1;DOID:2152,4.69e-19,1;DOID:299,3.07e-18,25;DOID:3908,1.51e-15,5;DOID:0050687,1.30e-14,143;DOID:1324,1.70e-11,15;DOID:0050615,8.11e-11,16;DOID:4468,1.43e-10,2;DOID:3493,1.57e-10,2;DOID:3910,2.07e-10,2;DOID:3905,4.61e-09,9;DOID:162,1.45e-08,235;DOID:14566,2.27e-08,239;DOID:4556,2.05e-07,3|ontology_enrichment_uberon=UBERON:0001911!1.98e-10!4;UBERON:0005333!1.98e-10!4;UBERON:0008425!1.98e-10!4;UBERON:0005311!1.98e-10!4;UBERON:0002294!3.18e-10!7;UBERON:0001173!3.18e-10!7;UBERON:0004912!3.18e-10!7;UBERON:0003100!8.91e-09!41;UBERON:0004119!4.62e-07!169;UBERON:0000925!4.62e-07!169;UBERON:0006595!4.62e-07!169;UBERON:0000974!7.25e-07!10;UBERON:0006853!8.51e-07!3;UBERON:0007685!8.51e-07!3;UBERON:0004134!8.51e-07!3|ontology_enrichment_uberon_v019=UBERON:0004911;5.13e-19;1!UBERON:0004903;1.98e-10;2!UBERON:0002173;1.98e-10;2!UBERON:0002186;1.98e-10;2!UBERON:0006955;3.42e-10;2!UBERON:0004909;3.42e-10;2!UBERON:0004801;3.42e-10;2!UBERON:0004802;3.10e-09;19!UBERON:0000115;3.10e-09;19!UBERON:0000058;3.50e-08;10!UBERON:0002048;4.72e-08;22!UBERON:0004807;4.72e-08;22!UBERON:0000117;4.72e-08;22!UBERON:0000171;4.72e-08;22!UBERON:0000170;4.72e-08;22!UBERON:0004821;2.25e-07;3!UBERON:0007499;2.25e-07;3!UBERON:0003215;2.25e-07;3!UBERON:0010368;2.25e-07;3!UBERON:0009911;2.25e-07;3!UBERON:0002299;2.25e-07;3!UBERON:0006524;2.25e-07;3!UBERON:0008874;2.25e-07;3!UBERON:0002169;2.25e-07;3!UBERON:0004894;2.25e-07;3!UBERON:0001723;2.71e-07;3!UBERON:0001033;2.71e-07;3|ontology_enrichment_uberon_v019_2=UBERON:0004911,4.69e-19,1;UBERON:0004903,2.07e-10,2;UBERON:0002173,2.07e-10,2;UBERON:0002186,2.07e-10,2;UBERON:0004909,3.27e-10,2;UBERON:0006955,3.58e-10,2;UBERON:0004801,3.58e-10,2;UBERON:0004802,3.33e-09,19;UBERON:0000115,3.33e-09,19;UBERON:0002048,5.01e-08,22;UBERON:0000117,5.01e-08,22;UBERON:0000171,5.01e-08,22;UBERON:0000170,5.01e-08,22;UBERON:0005597,5.01e-08,22;UBERON:0000118,5.01e-08,22;UBERON:0004821,2.32e-07,3;UBERON:0003215,2.32e-07,3;UBERON:0010368,2.32e-07,3;UBERON:0009911,2.32e-07,3;UBERON:0002299,2.32e-07,3;UBERON:0006524,2.32e-07,3;UBERON:0008874,2.32e-07,3;UBERON:0002169,2.32e-07,3;UBERON:0004894,2.32e-07,3;UBERON:0001723,2.63e-07,3;UBERON:0001033,2.63e-07,3;UBERON:0010056,2.63e-07,3|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.369754010166788,0,0,0,0,0,0.217010870715852,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.132409180813219,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.447792613514241,0.290633938513962,0.383382679165211,0,0,0,0,0.12624243342638,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.831076008928724,0.223874754722178,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.192190067365106,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.229723400206959,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.55567026775618,0,0,0,0,0,0,0.307160702099232,0,0,0,0,0,0,0,0,0,0,0,2.3365771298305,0,0,0,0,0,0,0,0,0,0,0,0,3.051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| ||
|DPIdataset=robustDPI | |||
|EntrezGene=NA | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |||
|TSSclassifier=N | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|description=CAGE_peak_at_chr7:989361..989377,- | |||
|id=chr7:989361..989377,- | |||
|ontology_enrichment_celltype=CL:0000066!1.60e-10!254;CL:0002327!1.98e-10!4;CL:0000239!8.51e-07!3;CL:1000615!8.51e-07!3;CL:0002306!8.51e-07!3 | |||
|ontology_enrichment_celltype_v019=CL:0000313;5.13e-19;1!CL:0000159;3.42e-10;2!CL:0002535;3.42e-10;2!CL:0000082;3.10e-09;19!CL:0000322;2.25e-07;3 | |||
|ontology_enrichment_celltype_v019_2=CL:0000313,4.69e-19,1;CL:0000159,3.27e-10,2;CL:0002535,3.58e-10,2;CL:0000082,3.33e-09,19;CL:0000066,6.20e-08,253;CL:0000322,2.32e-07,3 | |||
|ontology_enrichment_development_v019=UBERON:0008814;2.60e-10;2!UBERON:0010056;2.60e-10;2!UBERON:0001041;5.33e-10;30!UBERON:0009117;4.34e-08;10!UBERON:0005564;4.34e-08;10 | |||
|ontology_enrichment_disease=DOID:299!1.69e-19!25;DOID:305!1.81e-18!106;DOID:1749!7.73e-15!14;DOID:0050687!3.26e-12!143;DOID:3493!3.63e-10!2;DOID:4929!7.07e-10!2 | |||
|ontology_enrichment_disease_v019=DOID:1749;7.33e-21;14!DOID:3111;2.97e-19;1!DOID:3603;2.97e-19;1!DOID:2152;5.13e-19;1!DOID:299;3.42e-18;25!DOID:3908;1.40e-15;5!DOID:1324;1.55e-11;15!DOID:305;4.15e-11;106!DOID:0050615;7.46e-11;16!DOID:4468;1.43e-10;2!DOID:3493;1.64e-10;2!DOID:3910;1.98e-10;2!DOID:3905;4.43e-09;9!DOID:4556;1.99e-07;3 | |||
|ontology_enrichment_disease_v019_2=DOID:1749,8.13e-21,14;DOID:305,6.29e-20,106;DOID:3111,2.25e-19,1;DOID:3603,2.25e-19,1;DOID:2152,4.69e-19,1;DOID:299,3.07e-18,25;DOID:3908,1.51e-15,5;DOID:0050687,1.30e-14,143;DOID:1324,1.70e-11,15;DOID:0050615,8.11e-11,16;DOID:4468,1.43e-10,2;DOID:3493,1.57e-10,2;DOID:3910,2.07e-10,2;DOID:3905,4.61e-09,9;DOID:162,1.45e-08,235;DOID:14566,2.27e-08,239;DOID:4556,2.05e-07,3 | |||
|ontology_enrichment_uberon=UBERON:0001911!1.98e-10!4;UBERON:0005333!1.98e-10!4;UBERON:0008425!1.98e-10!4;UBERON:0005311!1.98e-10!4;UBERON:0002294!3.18e-10!7;UBERON:0001173!3.18e-10!7;UBERON:0004912!3.18e-10!7;UBERON:0003100!8.91e-09!41;UBERON:0004119!4.62e-07!169;UBERON:0000925!4.62e-07!169;UBERON:0006595!4.62e-07!169;UBERON:0000974!7.25e-07!10;UBERON:0006853!8.51e-07!3;UBERON:0007685!8.51e-07!3;UBERON:0004134!8.51e-07!3 | |||
|ontology_enrichment_uberon_v019=UBERON:0004911;5.13e-19;1!UBERON:0004903;1.98e-10;2!UBERON:0002173;1.98e-10;2!UBERON:0002186;1.98e-10;2!UBERON:0006955;3.42e-10;2!UBERON:0004909;3.42e-10;2!UBERON:0004801;3.42e-10;2!UBERON:0004802;3.10e-09;19!UBERON:0000115;3.10e-09;19!UBERON:0000058;3.50e-08;10!UBERON:0002048;4.72e-08;22!UBERON:0004807;4.72e-08;22!UBERON:0000117;4.72e-08;22!UBERON:0000171;4.72e-08;22!UBERON:0000170;4.72e-08;22!UBERON:0004821;2.25e-07;3!UBERON:0007499;2.25e-07;3!UBERON:0003215;2.25e-07;3!UBERON:0010368;2.25e-07;3!UBERON:0009911;2.25e-07;3!UBERON:0002299;2.25e-07;3!UBERON:0006524;2.25e-07;3!UBERON:0008874;2.25e-07;3!UBERON:0002169;2.25e-07;3!UBERON:0004894;2.25e-07;3!UBERON:0001723;2.71e-07;3!UBERON:0001033;2.71e-07;3 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0004911,4.69e-19,1;UBERON:0004903,2.07e-10,2;UBERON:0002173,2.07e-10,2;UBERON:0002186,2.07e-10,2;UBERON:0004909,3.27e-10,2;UBERON:0006955,3.58e-10,2;UBERON:0004801,3.58e-10,2;UBERON:0004802,3.33e-09,19;UBERON:0000115,3.33e-09,19;UBERON:0002048,5.01e-08,22;UBERON:0000117,5.01e-08,22;UBERON:0000171,5.01e-08,22;UBERON:0000170,5.01e-08,22;UBERON:0005597,5.01e-08,22;UBERON:0000118,5.01e-08,22;UBERON:0004821,2.32e-07,3;UBERON:0003215,2.32e-07,3;UBERON:0010368,2.32e-07,3;UBERON:0009911,2.32e-07,3;UBERON:0002299,2.32e-07,3;UBERON:0006524,2.32e-07,3;UBERON:0008874,2.32e-07,3;UBERON:0002169,2.32e-07,3;UBERON:0004894,2.32e-07,3;UBERON:0001723,2.63e-07,3;UBERON:0001033,2.63e-07,3;UBERON:0010056,2.63e-07,3 | |||
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|short_description=p@chr7:989361..989377,- | |||
}} |
Revision as of 02:42, 14 September 2013
Short description: | p@chr7:989361..989377, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr7:989361..989377, - |
Coexpression cluster: | NA |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
serous secreting cell | 4.69e-19 | 1 |
seromucus secreting cell | 3.27e-10 | 2 |
epithelial cell of cervix | 3.58e-10 | 2 |
epithelial cell of lung | 3.33e-09 | 19 |
epithelial cell | 6.20e-08 | 253 |
pneumocyte | 2.32e-07 | 3 |
Ontology term | p-value | n |
---|---|---|
epithelium of female gonad | 4.69e-19 | 1 |
bronchoalveolar duct junction | 2.07e-10 | 2 |
alveolar duct | 2.07e-10 | 2 |
bronchiole | 2.07e-10 | 2 |
epithelium of gonad | 3.27e-10 | 2 |
uterine epithelium | 3.58e-10 | 2 |
cervix epithelium | 3.58e-10 | 2 |
respiratory tract epithelium | 3.33e-09 | 19 |
lung epithelium | 3.33e-09 | 19 |
lung | 5.01e-08 | 22 |
respiratory tube | 5.01e-08 | 22 |
respiration organ | 5.01e-08 | 22 |
pair of lungs | 5.01e-08 | 22 |
lung primordium | 5.01e-08 | 22 |
lung bud | 5.01e-08 | 22 |
pulmonary alveolus epithelium | 2.32e-07 | 3 |
alveolus | 2.32e-07 | 3 |
pulmonary lobule | 2.32e-07 | 3 |
lobule | 2.32e-07 | 3 |
alveolus of lung | 2.32e-07 | 3 |
alveolar system | 2.32e-07 | 3 |
pulmonary acinus | 2.32e-07 | 3 |
alveolar sac | 2.32e-07 | 3 |
alveolar wall | 2.32e-07 | 3 |
tongue | 2.63e-07 | 3 |
gustatory system | 2.63e-07 | 3 |
future tongue | 2.63e-07 | 3 |
Ontology term | p-value | n |
---|---|---|
squamous cell carcinoma | 8.13e-21 | 14 |
carcinoma | 6.29e-20 | 106 |
cystadenocarcinoma | 2.25e-19 | 1 |
mucinous cystadenocarcinoma | 2.25e-19 | 1 |
ovary epithelial cancer | 4.69e-19 | 1 |
adenocarcinoma | 3.07e-18 | 25 |
non-small cell lung carcinoma | 1.51e-15 | 5 |
cell type cancer | 1.30e-14 | 143 |
lung cancer | 1.70e-11 | 15 |
respiratory system cancer | 8.11e-11 | 16 |
clear cell adenocarcinoma | 1.43e-10 | 2 |
signet ring cell adenocarcinoma | 1.57e-10 | 2 |
lung adenocarcinoma | 2.07e-10 | 2 |
lung carcinoma | 4.61e-09 | 9 |
cancer | 1.45e-08 | 235 |
disease of cellular proliferation | 2.27e-08 | 239 |
lung large cell carcinoma | 2.05e-07 | 3 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.