FFCP PHASE1:Hg19::chr6:167684651..167684669,+: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=54346|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding|HGNC=12570|TSSclassifier=W|UniProt=D6RFH7|association_with_transcript=0bp_to_ENST00000503433_5end|coexpression_cluster_id=C164|description=CAGE_peak_1_at_UNC93A_5end|id=chr6:167684651..167684669,+|ontology_enrichment_celltype=CL:0002178!3.62e-11!3;CL:0000039!4.08e-10!7;CL:0000586!4.08e-10!7;CL:0002563!9.75e-09!4;CL:0000223!3.53e-07!59|ontology_enrichment_celltype_v019=CL:0002563;3.65e-29;4!CL:0002253;2.37e-15;2!CL:0002076;1.01e-14;42!CL:0002251;1.62e-13;20!CL:0002178;6.73e-11;3!CL:0002231;8.17e-11;3|ontology_enrichment_celltype_v019_2=CL:0002563,3.16e-29,4;CL:0000223,8.11e-18,58;CL:0002076,3.34e-17,42;CL:0002253,2.05e-15,2;CL:0002251,1.56e-13,20;CL:0002178,6.73e-11,3;CL:0002231,8.17e-11,3|ontology_enrichment_development_v019=UBERON:0003104;3.66e-09;31!CL:0000223;4.58e-08;58|ontology_enrichment_disease=DOID:3119!5.70e-09!14;DOID:299!1.78e-07!25|ontology_enrichment_disease_v019=DOID:3119;7.32e-19;14!DOID:3493;1.15e-15;2!DOID:299;6.69e-11;25|ontology_enrichment_disease_v019_2=DOID:3119,6.89e-19,14;DOID:3493,1.15e-15,2;DOID:299,6.69e-11,25|ontology_enrichment_uberon=UBERON:0001042!4.11e-12!10;UBERON:0009145!4.11e-12!10;UBERON:0006562!5.01e-11!11;UBERON:0004921!9.55e-09!129;UBERON:0004185!9.55e-09!129;UBERON:0002372!9.74e-09!1;UBERON:0001961!9.74e-09!1;UBERON:0001744!9.74e-09!1;UBERON:0001735!9.74e-09!1;UBERON:0001242!9.75e-09!4;UBERON:0001262!9.75e-09!4;UBERON:0004786!9.75e-09!4;UBERON:0004808!9.75e-09!4;UBERON:0001277!9.75e-09!4;UBERON:0001052!1.14e-08!4;UBERON:0002370!2.49e-08!4;UBERON:0005058!2.49e-08!4;UBERON:0009113!2.49e-08!4;UBERON:0003295!2.49e-08!4;UBERON:0005562!2.49e-08!4;UBERON:0000077!2.13e-07!130;UBERON:0000974!3.64e-07!10;UBERON:0003350!3.77e-07!5;UBERON:0005409!3.85e-07!35;UBERON:0004119!3.85e-07!169;UBERON:0000925!3.85e-07!169;UBERON:0006595!3.85e-07!169;UBERON:0004907!4.25e-07!5;UBERON:0001007!7.36e-07!155;UBERON:0001555!7.36e-07!155;UBERON:0007026!7.36e-07!155|ontology_enrichment_uberon_v019=UBERON:0001242;3.65e-29;4!UBERON:0001262;3.65e-29;4!UBERON:0004786;3.65e-29;4!UBERON:0004808;3.65e-29;4!UBERON:0001277;3.65e-29;4!UBERON:0001052;6.47e-29;4!UBERON:0004907;2.27e-23;5!UBERON:0005409;3.57e-20;22!UBERON:0000485;3.71e-17;7!UBERON:0003929;3.71e-17;7!UBERON:0003350;3.79e-15;8!UBERON:0000160;7.89e-15;17!UBERON:0004921;2.04e-12;33!UBERON:0000059;3.30e-11;11!UBERON:0000945;4.79e-07;5!UBERON:0010039;4.79e-07;5|ontology_enrichment_uberon_v019_2=UBERON:0001242,3.16e-29,4;UBERON:0001262,3.16e-29,4;UBERON:0004786,3.16e-29,4;UBERON:0004808,3.16e-29,4;UBERON:0001277,3.16e-29,4;UBERON:0001052,5.61e-29,4;UBERON:0004907,2.02e-23,5;UBERON:0005409,6.16e-18,25;UBERON:0003350,3.53e-15,8;UBERON:0000160,7.52e-15,17;UBERON:0001046,4.33e-14,19;UBERON:0000485,1.31e-13,9;UBERON:0000059,3.14e-11,11;UBERON:0003929,6.69e-09,54;UBERON:0004921,8.24e-09,118;UBERON:0001007,3.33e-07,145;UBERON:0001555,3.33e-07,145;UBERON:0007026,3.33e-07,145|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.116193942869518,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,15.3735548178892,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.30239029332968,0,0,0,0,0,0,0,0,0,0,0,0,9.18531816896329,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.561421621224659,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0769502585037971,0,0,0.359030577639089,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.83758992864123,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.21491816834592,0,0,0,0,0,0,0,0.969890164884194,0,0,0,0,0,0,0,0,0,0.288180834308212,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,6.98975697164723,0,0.0824158583811665,0,0,0,0,0,0,0,0,0,0,0,0,0.236417121897595,0.0524545881349981,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0752103283492573,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.68163297988273,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,140.452984303413,0,0,0,0,0,0,0,0,0,0,0,0.231522474323834,0,0,0,0,0,0,0,0,0,0,0,0,0,0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| ||
|DPIdataset=robustDPI | |||
|EntrezGene=54346 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=12570 | |||
|TSSclassifier=W | |||
|UniProt=D6RFH7 | |||
|association_with_transcript=0bp_to_ENST00000503433_5end | |||
|coexpression_cluster_id=C164 | |||
|description=CAGE_peak_1_at_UNC93A_5end | |||
|id=chr6:167684651..167684669,+ | |||
|ontology_enrichment_celltype=CL:0002178!3.62e-11!3;CL:0000039!4.08e-10!7;CL:0000586!4.08e-10!7;CL:0002563!9.75e-09!4;CL:0000223!3.53e-07!59 | |||
|ontology_enrichment_celltype_v019=CL:0002563;3.65e-29;4!CL:0002253;2.37e-15;2!CL:0002076;1.01e-14;42!CL:0002251;1.62e-13;20!CL:0002178;6.73e-11;3!CL:0002231;8.17e-11;3 | |||
|ontology_enrichment_celltype_v019_2=CL:0002563,3.16e-29,4;CL:0000223,8.11e-18,58;CL:0002076,3.34e-17,42;CL:0002253,2.05e-15,2;CL:0002251,1.56e-13,20;CL:0002178,6.73e-11,3;CL:0002231,8.17e-11,3 | |||
|ontology_enrichment_development_v019=UBERON:0003104;3.66e-09;31!CL:0000223;4.58e-08;58 | |||
|ontology_enrichment_disease=DOID:3119!5.70e-09!14;DOID:299!1.78e-07!25 | |||
|ontology_enrichment_disease_v019=DOID:3119;7.32e-19;14!DOID:3493;1.15e-15;2!DOID:299;6.69e-11;25 | |||
|ontology_enrichment_disease_v019_2=DOID:3119,6.89e-19,14;DOID:3493,1.15e-15,2;DOID:299,6.69e-11,25 | |||
|ontology_enrichment_uberon=UBERON:0001042!4.11e-12!10;UBERON:0009145!4.11e-12!10;UBERON:0006562!5.01e-11!11;UBERON:0004921!9.55e-09!129;UBERON:0004185!9.55e-09!129;UBERON:0002372!9.74e-09!1;UBERON:0001961!9.74e-09!1;UBERON:0001744!9.74e-09!1;UBERON:0001735!9.74e-09!1;UBERON:0001242!9.75e-09!4;UBERON:0001262!9.75e-09!4;UBERON:0004786!9.75e-09!4;UBERON:0004808!9.75e-09!4;UBERON:0001277!9.75e-09!4;UBERON:0001052!1.14e-08!4;UBERON:0002370!2.49e-08!4;UBERON:0005058!2.49e-08!4;UBERON:0009113!2.49e-08!4;UBERON:0003295!2.49e-08!4;UBERON:0005562!2.49e-08!4;UBERON:0000077!2.13e-07!130;UBERON:0000974!3.64e-07!10;UBERON:0003350!3.77e-07!5;UBERON:0005409!3.85e-07!35;UBERON:0004119!3.85e-07!169;UBERON:0000925!3.85e-07!169;UBERON:0006595!3.85e-07!169;UBERON:0004907!4.25e-07!5;UBERON:0001007!7.36e-07!155;UBERON:0001555!7.36e-07!155;UBERON:0007026!7.36e-07!155 | |||
|ontology_enrichment_uberon_v019=UBERON:0001242;3.65e-29;4!UBERON:0001262;3.65e-29;4!UBERON:0004786;3.65e-29;4!UBERON:0004808;3.65e-29;4!UBERON:0001277;3.65e-29;4!UBERON:0001052;6.47e-29;4!UBERON:0004907;2.27e-23;5!UBERON:0005409;3.57e-20;22!UBERON:0000485;3.71e-17;7!UBERON:0003929;3.71e-17;7!UBERON:0003350;3.79e-15;8!UBERON:0000160;7.89e-15;17!UBERON:0004921;2.04e-12;33!UBERON:0000059;3.30e-11;11!UBERON:0000945;4.79e-07;5!UBERON:0010039;4.79e-07;5 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001242,3.16e-29,4;UBERON:0001262,3.16e-29,4;UBERON:0004786,3.16e-29,4;UBERON:0004808,3.16e-29,4;UBERON:0001277,3.16e-29,4;UBERON:0001052,5.61e-29,4;UBERON:0004907,2.02e-23,5;UBERON:0005409,6.16e-18,25;UBERON:0003350,3.53e-15,8;UBERON:0000160,7.52e-15,17;UBERON:0001046,4.33e-14,19;UBERON:0000485,1.31e-13,9;UBERON:0000059,3.14e-11,11;UBERON:0003929,6.69e-09,54;UBERON:0004921,8.24e-09,118;UBERON:0001007,3.33e-07,145;UBERON:0001555,3.33e-07,145;UBERON:0007026,3.33e-07,145 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.116193942869518,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,15.3735548178892,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.30239029332968,0,0,0,0,0,0,0,0,0,0,0,0,9.18531816896329,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.561421621224659,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0769502585037971,0,0,0.359030577639089,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.83758992864123,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.21491816834592,0,0,0,0,0,0,0,0.969890164884194,0,0,0,0,0,0,0,0,0,0.288180834308212,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,6.98975697164723,0,0.0824158583811665,0,0,0,0,0,0,0,0,0,0,0,0,0.236417121897595,0.0524545881349981,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0752103283492573,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.68163297988273,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,140.452984303413,0,0,0,0,0,0,0,0,0,0,0,0.231522474323834,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.109265571963696,0,0.713921808193872,0,0.0918948995348449,0,0,0,0,0,0.213233981900981,0,0.129177819672012,0.372448285775147,0,0,0,0.653150243690884,0,0.26940821205835,0,0,0,0,0,0,0,0,0,0,0,0 | |||
|short_description=p1@UNC93A | |||
}} |
Revision as of 19:23, 13 September 2013
Short description: | p1@UNC93A |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_1_at_UNC93A_5end |
Coexpression cluster: | C164_signet_corpus_optic_mucinous_substantia_salivary_choriocarcinoma |
Association with transcript: | 0bp_to_ENST00000503433_5end |
EntrezGene: | UNC93A |
HGNC: | 12570 |
UniProt: | D6RFH7 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
intestinal epithelial cell | 3.16e-29 | 4 |
endodermal cell | 8.11e-18 | 58 |
endo-epithelial cell | 3.34e-17 | 42 |
epithelial cell of large intestine | 2.05e-15 | 2 |
epithelial cell of alimentary canal | 1.56e-13 | 20 |
epithelial cell of stomach | 6.73e-11 | 3 |
epithelial cell of prostate | 8.17e-11 | 3 |
Ontology term | p-value | n |
---|---|---|
intestinal mucosa | 3.16e-29 | 4 |
wall of intestine | 3.16e-29 | 4 |
gastrointestinal system mucosa | 3.16e-29 | 4 |
gastrointestinal system epithelium | 3.16e-29 | 4 |
intestinal epithelium | 3.16e-29 | 4 |
rectum | 5.61e-29 | 4 |
lower digestive tract | 2.02e-23 | 5 |
gastrointestinal system | 6.16e-18 | 25 |
epithelium of mucosa | 3.53e-15 | 8 |
intestine | 7.52e-15 | 17 |
hindgut | 4.33e-14 | 19 |
simple columnar epithelium | 1.31e-13 | 9 |
large intestine | 3.14e-11 | 11 |
gut epithelium | 6.69e-09 | 54 |
subdivision of digestive tract | 8.24e-09 | 118 |
digestive system | 3.33e-07 | 145 |
digestive tract | 3.33e-07 | 145 |
primitive gut | 3.33e-07 | 145 |
Ontology term | p-value | n |
---|---|---|
gastrointestinal system cancer | 6.89e-19 | 14 |
signet ring cell adenocarcinoma | 1.15e-15 | 2 |
adenocarcinoma | 6.69e-11 | 25 |
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