FFCP PHASE1:Hg19::chr6:125367597..125367609,+: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=154214|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding|HGNC=21487|TSSclassifier=W|UniProt=Q8TC41|association_with_transcript=-136bp_to_ENST00000368415_5end|coexpression_cluster_id=C50|description=CAGE_peak_17_at_RNF217_5end|id=chr6:125367597..125367609,+|ontology_enrichment_celltype=CL:0000244!1.09e-15!4;CL:0000731!1.09e-15!4;CL:0002251!1.19e-14!21;CL:0002076!1.48e-14!43;CL:0002541!9.86e-13!3;CL:0002621!1.70e-11!3;CL:0000223!3.66e-11!59;CL:0000066!5.43e-11!254;CL:0002537!1.06e-07!5;CL:0002159!5.94e-07!13;CL:0000622!6.78e-07!5|ontology_enrichment_celltype_v019=CL:0002541;3.16e-55;3!CL:0000349;3.11e-34;19!CL:0002537;4.31e-33;5!CL:0000244;6.47e-19;4!CL:0000731;6.47e-19;4!CL:0000317;3.27e-10;2!CL:1000448;3.27e-10;2!CL:0002308;3.27e-10;2!CL:0002140;3.27e-10;2!CL:0000134;1.24e-08;55!CL:0000723;5.62e-08;61!CL:0002166;2.79e-07;3|ontology_enrichment_celltype_v019_2=CL:0002541,3.47e-55,3;CL:0000349,3.20e-34,19;CL:0002537,4.31e-33,5;CL:0000244,5.64e-19,4;CL:0000731,5.64e-19,4;CL:0000317,3.58e-10,2;CL:1000448,3.58e-10,2;CL:0002308,3.58e-10,2;CL:0002140,3.58e-10,2;CL:0002166,2.79e-07,3|ontology_enrichment_development_v019=UBERON:0003124;4.69e-19;1|ontology_enrichment_disease=DOID:1749!2.49e-08!14|ontology_enrichment_disease_v019=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0005631!4.93e-21!14;UBERON:0000158!4.93e-21!14;UBERON:0000365!1.75e-18!5;UBERON:0005910!2.37e-15!6;UBERON:0003124!8.77e-14!7;UBERON:0000476!9.86e-13!3;UBERON:0000920!9.86e-13!3;UBERON:0000478!1.66e-11!24;UBERON:0001949!1.70e-11!3;UBERON:0000166!2.07e-09!21;UBERON:0000305!3.64e-09!7;UBERON:0000974!9.66e-09!10;UBERON:0003343!1.93e-08!4;UBERON:0004785!1.93e-08!4;UBERON:0004923!3.82e-08!57;UBERON:0004871!5.16e-08!8;UBERON:0000161!5.87e-08!35;UBERON:0004119!1.06e-07!169;UBERON:0000925!1.06e-07!169;UBERON:0006595!1.06e-07!169;UBERON:0003729!7.84e-07!5;UBERON:0000165!9.68e-07!28;UBERON:0000930!9.68e-07!28|ontology_enrichment_uberon_v019=UBERON:0005631;6.54e-65;10!UBERON:0000158;6.54e-65;10!UBERON:0003124;3.16e-55;3!UBERON:0000920;3.16e-55;3!UBERON:0000478;1.47e-36;24!UBERON:0000305;7.15e-24;7!UBERON:0000365;2.42e-15;5!UBERON:0005910;5.94e-13;6!UBERON:0002419;3.27e-10;2!UBERON:0007771;3.27e-10;2!UBERON:0003297;3.27e-10;2!UBERON:0001821;3.27e-10;2!UBERON:0003487;3.27e-10;2!UBERON:0001820;3.27e-10;2!UBERON:0000486;6.26e-07;12|ontology_enrichment_uberon_v019_2=UBERON:0005631,1.13e-62,14;UBERON:0000158,1.13e-62,14;UBERON:0000920,3.47e-55,3;UBERON:0003124,1.21e-41,7;UBERON:0000478,1.51e-36,24;UBERON:0000305,7.15e-24,7;UBERON:0004871,5.52e-21,8;UBERON:0000365,2.17e-15,5;UBERON:0004923,3.72e-13,66;UBERON:0005910,5.42e-13,6;UBERON:0002419,3.58e-10,2;UBERON:0007771,3.58e-10,2;UBERON:0003297,3.58e-10,2;UBERON:0001821,3.58e-10,2;UBERON:0003487,3.58e-10,2;UBERON:0001820,3.58e-10,2;UBERON:0005089,3.58e-10,2;UBERON:0005088,3.58e-10,2|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0.655324116390517,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.087834785693126,0.72038491523742,0,0.370784442784429,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.386521706326594,0.545492241181669,0.286804595389004,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.703702806881416,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.18376766658517,0.283550194484773,0.0895585227028483,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.254094624222463,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.303127571446259,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.200506470303285,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.515205058238611,0,0,0,1.30012049207304,0,0,0,0,0,0,0,0,0,0.495854746082934,0.192190067365106,0.255225424989168,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.43050537267123,1.68471475667626,0.886860307073351,6.89170200620878,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,7.87856799634377,5.04839957415486,5.52889263778618,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.236387681767936,0,0,0,0,0,0,0,0,0,0,0.278847488557207,0,0,0,0.0897576444097721,0.434589487688032,12.4410452295449,6.3202339447285,12.2597998484286,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.19566461893209,0,0,0,0,0,0,0,0,0,0,0,0,0.138674673013139,0,0.0979923974143777,0.0870592065804026,0,0,0,0,0,0,0,0,0,0,0,0.586654148204409,0,0,0.19980960958213,0,0,0,0,0,0.235694034616795,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.638341257770182,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,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| ||
|DPIdataset=robustDPI | |||
|EntrezGene=154214 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=21487 | |||
|TSSclassifier=W | |||
|UniProt=Q8TC41 | |||
|association_with_transcript=-136bp_to_ENST00000368415_5end | |||
|coexpression_cluster_id=C50 | |||
|description=CAGE_peak_17_at_RNF217_5end | |||
|id=chr6:125367597..125367609,+ | |||
|ontology_enrichment_celltype=CL:0000244!1.09e-15!4;CL:0000731!1.09e-15!4;CL:0002251!1.19e-14!21;CL:0002076!1.48e-14!43;CL:0002541!9.86e-13!3;CL:0002621!1.70e-11!3;CL:0000223!3.66e-11!59;CL:0000066!5.43e-11!254;CL:0002537!1.06e-07!5;CL:0002159!5.94e-07!13;CL:0000622!6.78e-07!5 | |||
|ontology_enrichment_celltype_v019=CL:0002541;3.16e-55;3!CL:0000349;3.11e-34;19!CL:0002537;4.31e-33;5!CL:0000244;6.47e-19;4!CL:0000731;6.47e-19;4!CL:0000317;3.27e-10;2!CL:1000448;3.27e-10;2!CL:0002308;3.27e-10;2!CL:0002140;3.27e-10;2!CL:0000134;1.24e-08;55!CL:0000723;5.62e-08;61!CL:0002166;2.79e-07;3 | |||
|ontology_enrichment_celltype_v019_2=CL:0002541,3.47e-55,3;CL:0000349,3.20e-34,19;CL:0002537,4.31e-33,5;CL:0000244,5.64e-19,4;CL:0000731,5.64e-19,4;CL:0000317,3.58e-10,2;CL:1000448,3.58e-10,2;CL:0002308,3.58e-10,2;CL:0002140,3.58e-10,2;CL:0002166,2.79e-07,3 | |||
|ontology_enrichment_development_v019=UBERON:0003124;4.69e-19;1 | |||
|ontology_enrichment_disease=DOID:1749!2.49e-08!14 | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0005631!4.93e-21!14;UBERON:0000158!4.93e-21!14;UBERON:0000365!1.75e-18!5;UBERON:0005910!2.37e-15!6;UBERON:0003124!8.77e-14!7;UBERON:0000476!9.86e-13!3;UBERON:0000920!9.86e-13!3;UBERON:0000478!1.66e-11!24;UBERON:0001949!1.70e-11!3;UBERON:0000166!2.07e-09!21;UBERON:0000305!3.64e-09!7;UBERON:0000974!9.66e-09!10;UBERON:0003343!1.93e-08!4;UBERON:0004785!1.93e-08!4;UBERON:0004923!3.82e-08!57;UBERON:0004871!5.16e-08!8;UBERON:0000161!5.87e-08!35;UBERON:0004119!1.06e-07!169;UBERON:0000925!1.06e-07!169;UBERON:0006595!1.06e-07!169;UBERON:0003729!7.84e-07!5;UBERON:0000165!9.68e-07!28;UBERON:0000930!9.68e-07!28 | |||
|ontology_enrichment_uberon_v019=UBERON:0005631;6.54e-65;10!UBERON:0000158;6.54e-65;10!UBERON:0003124;3.16e-55;3!UBERON:0000920;3.16e-55;3!UBERON:0000478;1.47e-36;24!UBERON:0000305;7.15e-24;7!UBERON:0000365;2.42e-15;5!UBERON:0005910;5.94e-13;6!UBERON:0002419;3.27e-10;2!UBERON:0007771;3.27e-10;2!UBERON:0003297;3.27e-10;2!UBERON:0001821;3.27e-10;2!UBERON:0003487;3.27e-10;2!UBERON:0001820;3.27e-10;2!UBERON:0000486;6.26e-07;12 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0005631,1.13e-62,14;UBERON:0000158,1.13e-62,14;UBERON:0000920,3.47e-55,3;UBERON:0003124,1.21e-41,7;UBERON:0000478,1.51e-36,24;UBERON:0000305,7.15e-24,7;UBERON:0004871,5.52e-21,8;UBERON:0000365,2.17e-15,5;UBERON:0004923,3.72e-13,66;UBERON:0005910,5.42e-13,6;UBERON:0002419,3.58e-10,2;UBERON:0007771,3.58e-10,2;UBERON:0003297,3.58e-10,2;UBERON:0001821,3.58e-10,2;UBERON:0003487,3.58e-10,2;UBERON:0001820,3.58e-10,2;UBERON:0005089,3.58e-10,2;UBERON:0005088,3.58e-10,2 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0.655324116390517,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.087834785693126,0.72038491523742,0,0.370784442784429,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.386521706326594,0.545492241181669,0.286804595389004,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.703702806881416,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.18376766658517,0.283550194484773,0.0895585227028483,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.254094624222463,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.303127571446259,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.200506470303285,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.515205058238611,0,0,0,1.30012049207304,0,0,0,0,0,0,0,0,0,0.495854746082934,0.192190067365106,0.255225424989168,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.43050537267123,1.68471475667626,0.886860307073351,6.89170200620878,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,7.87856799634377,5.04839957415486,5.52889263778618,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.236387681767936,0,0,0,0,0,0,0,0,0,0,0.278847488557207,0,0,0,0.0897576444097721,0.434589487688032,12.4410452295449,6.3202339447285,12.2597998484286,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.19566461893209,0,0,0,0,0,0,0,0,0,0,0,0,0.138674673013139,0,0.0979923974143777,0.0870592065804026,0,0,0,0,0,0,0,0,0,0,0,0.586654148204409,0,0,0.19980960958213,0,0,0,0,0,0.235694034616795,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.638341257770182,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.622077260032973,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.196295437002051,0.825788063434183,0,0.115525666150338,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.255524855279191,0,0,0,0,1.50794029276486,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.207216164163037,0.17071847709395,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.485710993059139,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.26721740526556,0,0,0.454672189309436,0.535928260312357,0,0,0,0,0.516711278688049,0.496597714366863,0,0,0,0,0,0,0,0,0.0814032686109745,0,0,0,0,0,0,0,0.402547587182052,0 | |||
|short_description=p17@RNF217 | |||
}} |
Revision as of 17:47, 13 September 2013
Short description: | p17@RNF217 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_17_at_RNF217_5end |
Coexpression cluster: | C50_chorionic_placenta_amniotic_migratory_smallcell_chronic_choriocarcinoma |
Association with transcript: | -136bp_to_ENST00000368415_5end |
EntrezGene: | RNF217 |
HGNC: | 21487 |
UniProt: | Q8TC41 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
chorionic membrane mesenchymal stem cell | 3.47e-55 | 3 |
extraembryonic cell | 3.20e-34 | 19 |
amnion mesenchymal stem cell | 4.31e-33 | 5 |
transitional epithelial cell | 5.64e-19 | 4 |
urothelial cell | 5.64e-19 | 4 |
sebum secreting cell | 3.58e-10 | 2 |
epithelial cell of sweat gland | 3.58e-10 | 2 |
epithelial cell of skin gland | 3.58e-10 | 2 |
acinar cell of sebaceous gland | 3.58e-10 | 2 |
epithelial cell of Malassez | 2.79e-07 | 3 |
Ontology term | p-value | n |
---|---|---|
extraembryonic membrane | 1.13e-62 | 14 |
membranous layer | 1.13e-62 | 14 |
egg chorion | 3.47e-55 | 3 |
chorion | 1.21e-41 | 7 |
extraembryonic structure | 1.51e-36 | 24 |
amnion | 7.15e-24 | 7 |
somatic layer of lateral plate mesoderm | 5.52e-21 | 8 |
urothelium | 2.17e-15 | 5 |
organ component layer | 3.72e-13 | 66 |
transitional epithelium | 5.42e-13 | 6 |
skin gland | 3.58e-10 | 2 |
epidermis gland | 3.58e-10 | 2 |
gland of integumental system | 3.58e-10 | 2 |
sebaceous gland | 3.58e-10 | 2 |
skin sebaceous gland | 3.58e-10 | 2 |
sweat gland | 3.58e-10 | 2 |
sweat gland placode | 3.58e-10 | 2 |
sebaceous gland placode | 3.58e-10 | 2 |
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