FFCP PHASE1:Hg19::chr6:42110342..42110365,-: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=647024|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding|HGNC=21288|TSSclassifier=S|UniProt=|association_with_transcript=0bp_to_ENST00000356542_5end|coexpression_cluster_id=C543|description=CAGE_peak_1_at_C6orf132_5end|id=chr6:42110342..42110365,-|ontology_enrichment_celltype=CL:0000066!3.27e-35!254;CL:0002076!1.35e-15!43;CL:0000223!1.77e-13!59;CL:0002251!1.31e-08!21;CL:0002368!1.11e-07!13;CL:0002321!9.57e-07!248|ontology_enrichment_celltype_v019=CL:0002076;4.05e-16;42!CL:0002251;9.05e-11;20!CL:0002368;6.77e-10;13!CL:0002202;4.85e-07;9!CL:0002632;4.85e-07;9!CL:1000507;7.62e-07;10!CL:1000494;7.62e-07;10|ontology_enrichment_celltype_v019_2=CL:0000066,1.37e-38,253;CL:0002076,6.70e-21,42;CL:0000223,9.06e-19,58;CL:0002251,9.15e-11,20;CL:0002368,6.95e-10,13;CL:0000076,5.19e-09,63;CL:0002202,4.91e-07,9;CL:0002632,4.91e-07,9;CL:1000507,8.38e-07,10;CL:1000494,8.38e-07,10|ontology_enrichment_development_v019=CL:0000223;1.75e-09;58!UBERON:0006595;8.06e-07;86|ontology_enrichment_disease=DOID:305!4.12e-20!106;DOID:0050687!2.53e-12!143;DOID:1749!3.61e-09!14;DOID:299!5.97e-08!25|ontology_enrichment_disease_v019=DOID:1749;1.51e-11;14!DOID:299;3.98e-08;25|ontology_enrichment_disease_v019_2=DOID:305,2.63e-16,106;DOID:1749,1.52e-11,14;DOID:0050687,5.72e-11,143;DOID:299,3.65e-08,25|ontology_enrichment_uberon=UBERON:0004119!3.10e-24!169;UBERON:0000925!3.10e-24!169;UBERON:0006595!3.10e-24!169;UBERON:0001007!4.02e-19!155;UBERON:0001555!4.02e-19!155;UBERON:0007026!4.02e-19!155;UBERON:0004921!2.42e-17!129;UBERON:0004185!2.42e-17!129;UBERON:0000464!1.32e-16!104;UBERON:0000077!1.61e-16!130;UBERON:0000466!4.79e-16!126;UBERON:0001004!6.80e-15!72;UBERON:0003104!8.05e-13!238;UBERON:0009142!8.05e-13!238;UBERON:0000065!3.22e-12!53;UBERON:0001041!1.18e-11!98;UBERON:0009569!2.61e-10!113;UBERON:0001048!3.41e-10!168;UBERON:0005911!5.61e-10!82;UBERON:0005178!1.94e-09!34;UBERON:0002224!1.94e-09!34;UBERON:0000072!2.37e-09!46;UBERON:0000915!3.35e-09!52;UBERON:0008947!3.66e-09!38;UBERON:0003258!3.66e-09!38;UBERON:0000481!3.93e-09!347;UBERON:0005181!7.79e-09!35;UBERON:0005177!1.13e-08!107;UBERON:0002553!1.22e-08!70;UBERON:0005156!1.86e-08!59;UBERON:0000990!1.86e-08!59;UBERON:0005153!3.44e-08!37;UBERON:0002100!4.09e-08!216;UBERON:0000062!6.24e-08!511;UBERON:0000161!7.59e-08!35;UBERON:0003133!1.08e-07!48;UBERON:0001008!1.25e-07!45;UBERON:0006554!2.58e-07!44;UBERON:0000063!2.96e-07!97;UBERON:0000468!5.30e-07!659;UBERON:0005157!6.84e-07!51;UBERON:0007196!9.42e-07!14;UBERON:0001558!9.42e-07!14|ontology_enrichment_uberon_v019=UBERON:0004921;7.51e-11;33!UBERON:0005178;4.31e-09;34!UBERON:0002224;4.31e-09;34!UBERON:0005181;1.61e-08;35!UBERON:0006554;5.94e-08;30!UBERON:0001008;5.94e-08;30!UBERON:0001555;9.51e-08;54!UBERON:0005911;1.24e-07;36!UBERON:0001041;2.68e-07;14!UBERON:0004807;2.86e-07;22!UBERON:0000161;2.98e-07;19!UBERON:0000166;2.98e-07;19!UBERON:0007196;4.55e-07;15!UBERON:0001558;4.55e-07;15!UBERON:0000165;5.96e-07;28!UBERON:0004211;7.62e-07;10!UBERON:0009773;7.62e-07;10!UBERON:0001231;7.62e-07;10!UBERON:0004810;7.62e-07;10!UBERON:0002048;9.59e-07;22!UBERON:0000117;9.59e-07;22!UBERON:0000171;9.59e-07;22!UBERON:0000170;9.59e-07;22|ontology_enrichment_uberon_v019_2=UBERON:0004119,1.39e-26,160;UBERON:0000925,1.39e-26,160;UBERON:0006595,1.39e-26,160;UBERON:0001007,1.88e-20,145;UBERON:0001555,1.88e-20,145;UBERON:0007026,1.88e-20,145;UBERON:0004921,1.83e-17,118;UBERON:0001004,3.71e-13,74;UBERON:0005177,4.60e-13,101;UBERON:0005911,3.11e-12,82;UBERON:0001008,1.22e-11,48;UBERON:0006554,3.32e-11,47;UBERON:0001041,3.46e-11,87;UBERON:0009569,6.54e-11,112;UBERON:0005178,2.54e-10,34;UBERON:0002224,2.54e-10,34;UBERON:0000161,5.63e-10,36;UBERON:0005181,8.63e-10,35;UBERON:0005153,9.64e-10,37;UBERON:0000065,3.82e-09,54;UBERON:0005157,2.33e-08,47;UBERON:0000166,3.12e-08,22;UBERON:0000915,6.09e-08,52;UBERON:0005631,1.05e-07,14;UBERON:0000158,1.05e-07,14;UBERON:0007196,5.41e-07,15;UBERON:0001558,5.41e-07,15;UBERON:0002530,5.98e-07,59;UBERON:0005156,7.89e-07,59;UBERON:0000990,7.89e-07,59;UBERON:0004810,8.38e-07,10;UBERON:0002048,9.74e-07,22;UBERON:0000117,9.74e-07,22;UBERON:0000171,9.74e-07,22;UBERON:0000170,9.74e-07,22;UBERON:0005597,9.74e-07,22;UBERON:0000118,9.74e-07,22|phase1_expression=0.363356758541113,0.214100523890983,0.140954404095971,0,0,0.872338524100369,0,0,0,38.5802280307369,105.367976363837,18.1306338868043,17.9361545195348,0,0,0.672325146451775,0.602694528023977,0,0.487932798790507,0.123121058076788,0.612002073732759,0,0,0,0,0,0,0,0,0,0.464448369948228,34.0185853057203,48.4941529232983,41.4124491386802,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.309706370895104,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.21079900526674,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.255725123687061,0.361439152384566,1.00267582127178,0.434539556882471,0,0,0.0945348171640679,0.221729397462564,0.263504357079378,7.13835961462534,93.2595938028908,78.977086313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| ||
|DPIdataset=robustDPI | |||
|EntrezGene=647024 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=21288 | |||
|TSSclassifier=S | |||
|UniProt= | |||
|association_with_transcript=0bp_to_ENST00000356542_5end | |||
|coexpression_cluster_id=C543 | |||
|description=CAGE_peak_1_at_C6orf132_5end | |||
|id=chr6:42110342..42110365,- | |||
|ontology_enrichment_celltype=CL:0000066!3.27e-35!254;CL:0002076!1.35e-15!43;CL:0000223!1.77e-13!59;CL:0002251!1.31e-08!21;CL:0002368!1.11e-07!13;CL:0002321!9.57e-07!248 | |||
|ontology_enrichment_celltype_v019=CL:0002076;4.05e-16;42!CL:0002251;9.05e-11;20!CL:0002368;6.77e-10;13!CL:0002202;4.85e-07;9!CL:0002632;4.85e-07;9!CL:1000507;7.62e-07;10!CL:1000494;7.62e-07;10 | |||
|ontology_enrichment_celltype_v019_2=CL:0000066,1.37e-38,253;CL:0002076,6.70e-21,42;CL:0000223,9.06e-19,58;CL:0002251,9.15e-11,20;CL:0002368,6.95e-10,13;CL:0000076,5.19e-09,63;CL:0002202,4.91e-07,9;CL:0002632,4.91e-07,9;CL:1000507,8.38e-07,10;CL:1000494,8.38e-07,10 | |||
|ontology_enrichment_development_v019=CL:0000223;1.75e-09;58!UBERON:0006595;8.06e-07;86 | |||
|ontology_enrichment_disease=DOID:305!4.12e-20!106;DOID:0050687!2.53e-12!143;DOID:1749!3.61e-09!14;DOID:299!5.97e-08!25 | |||
|ontology_enrichment_disease_v019=DOID:1749;1.51e-11;14!DOID:299;3.98e-08;25 | |||
|ontology_enrichment_disease_v019_2=DOID:305,2.63e-16,106;DOID:1749,1.52e-11,14;DOID:0050687,5.72e-11,143;DOID:299,3.65e-08,25 | |||
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| |||
|short_description=p1@C6orf132 | |||
}} |
Revision as of 21:01, 13 September 2013
Short description: | p1@C6orf132 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_1_at_C6orf132_5end |
Coexpression cluster: | C543_Alveolar_Corneal_Urothelial_amniotic_Esophageal_Tracheal_esophagus |
Association with transcript: | 0bp_to_ENST00000356542_5end |
EntrezGene: | C6orf132 |
HGNC: | 21288 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
epithelial cell | 1.37e-38 | 253 |
endo-epithelial cell | 6.70e-21 | 42 |
endodermal cell | 9.06e-19 | 58 |
epithelial cell of alimentary canal | 9.15e-11 | 20 |
respiratory epithelial cell | 6.95e-10 | 13 |
squamous epithelial cell | 5.19e-09 | 63 |
epithelial cell of tracheobronchial tree | 4.91e-07 | 9 |
epithelial cell of lower respiratory tract | 4.91e-07 | 9 |
kidney tubule cell | 8.38e-07 | 10 |
nephron tubule epithelial cell | 8.38e-07 | 10 |
Ontology term | p-value | n |
---|---|---|
carcinoma | 2.63e-16 | 106 |
squamous cell carcinoma | 1.52e-11 | 14 |
cell type cancer | 5.72e-11 | 143 |
adenocarcinoma | 3.65e-08 | 25 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.