FFCP PHASE1:Hg19::chr6:31830655..31830666,-: Difference between revisions
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{{FFCP | 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57396436479,0,0,0.103432995861895,0,0.714193294391221,0.581300188524055,0.620747142958579,0.560659312903067,0.763765899337979,0.202117188958219,0.653150243690884,0,0.26940821205835,1.43444410785353,0,0.325613074443898,0.320182037633146,0,0.359300808426348,2.34640942403454,0.366724332548599,0,0.665756774185513,1.00636896795513,0|short_description=p3@NEU1}} | ||
|DPIdataset=robustDPI | |||
|EntrezGene=4758 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=7758 | |||
|TSSclassifier=S | |||
|UniProt=Q99519 | |||
|association_with_transcript=16bp_to_ENST00000375631_5end | |||
|description=CAGE_peak_3_at_NEU1_5end | |||
|id=chr6:31830655..31830666,- | |||
|ontology_enrichment_celltype=CL:0002057!1.67e-10!42;CL:0000860!1.99e-10!45;CL:0000557!2.98e-10!71;CL:0000766!3.87e-10!76;CL:0000839!9.93e-10!70;CL:0002009!1.73e-09!65;CL:0002194!1.79e-09!63;CL:0000576!1.79e-09!63;CL:0000040!1.79e-09!63;CL:0000559!1.79e-09!63 | |||
|ontology_enrichment_celltype_v019=CL:0000860;4.78e-11;33!CL:0002057;4.78e-11;33!CL:1000497;4.74e-09;17!CL:0002518;4.74e-09;17!CL:0000473;6.20e-08;39!CL:0000234;6.20e-08;39!CL:1000449;1.05e-07;15!CL:0002681;8.58e-07;12!CL:0002584;8.58e-07;12 | |||
|ontology_enrichment_celltype_v019_2=CL:0000766,1.65e-11,72;CL:0000860,2.20e-11,42;CL:0002057,2.20e-11,42;CL:0000473,4.72e-10,48;CL:0000234,4.72e-10,48;CL:0000557,5.11e-10,67;CL:0000839,1.49e-09,66;CL:1000497,2.17e-09,17;CL:0002518,2.17e-09,17;CL:0002194,1.11e-08,59;CL:0000576,1.11e-08,59;CL:0000040,1.11e-08,59;CL:0000559,1.11e-08,59;CL:0002009,3.90e-08,61;CL:1000449,5.71e-08,15;CL:0000763,9.40e-08,108;CL:0000049,9.40e-08,108;CL:0002681,5.06e-07,12;CL:0002584,5.06e-07,12 | |||
|ontology_enrichment_development_v019=CL:0002057;2.74e-08;42 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002193!7.58e-09!112;UBERON:0002371!9.20e-09!80;UBERON:0001474!9.60e-09!86;UBERON:0002390!1.41e-08!102;UBERON:0003061!1.41e-08!102;UBERON:0004765!2.57e-07!101;UBERON:0001434!2.57e-07!101;UBERON:0003081!3.42e-07!216;UBERON:0002405!4.91e-07!115;UBERON:0000926!8.80e-07!448;UBERON:0004120!8.80e-07!448;UBERON:0006603!8.80e-07!448 | |||
|ontology_enrichment_uberon_v019=UBERON:0006554;5.36e-08;30!UBERON:0001008;5.36e-08;30!UBERON:0006555;1.05e-07;15!UBERON:0004819;1.05e-07;15!UBERON:0001285;1.05e-07;15!UBERON:0007684;1.05e-07;15!UBERON:0002113;1.25e-07;24!UBERON:0011143;1.25e-07;24!UBERON:0001225;8.58e-07;12!UBERON:0008987;8.58e-07;12 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002371,2.20e-08,76;UBERON:0002390,2.59e-08,98;UBERON:0003061,2.59e-08,98;UBERON:0004211,5.71e-08,15;UBERON:0009773,5.71e-08,15;UBERON:0001231,5.71e-08,15;UBERON:0001285,5.71e-08,15;UBERON:0007684,5.71e-08,15;UBERON:0004208,5.71e-08,15;UBERON:0002193,1.13e-07,108;UBERON:0001474,1.24e-07,82;UBERON:0006555,2.79e-07,16;UBERON:0004819,2.79e-07,16;UBERON:0006554,3.05e-07,47;UBERON:0003081,4.25e-07,203;UBERON:0001225,5.06e-07,12;UBERON:0008987,5.06e-07,12;UBERON:0001008,5.83e-07,48;UBERON:0001737,6.80e-07,9;UBERON:0002113,6.94e-07,26;UBERON:0003918,6.94e-07,26;UBERON:0011143,6.94e-07,26;UBERON:0005095,6.94e-07,26;UBERON:0007687,6.94e-07,26 | |||
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| |||
|short_description=p3@NEU1 | |||
}} |
Revision as of 20:18, 13 September 2013
Short description: | p3@NEU1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_3_at_NEU1_5end |
Coexpression cluster: | NA |
Association with transcript: | 16bp_to_ENST00000375631_5end |
EntrezGene: | NEU1 |
HGNC: | 7758 |
UniProt: | Q99519 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
myeloid leukocyte | 1.65e-11 | 72 |
classical monocyte | 2.20e-11 | 42 |
CD14-positive, CD16-negative classical monocyte | 2.20e-11 | 42 |
defensive cell | 4.72e-10 | 48 |
phagocyte | 4.72e-10 | 48 |
granulocyte monocyte progenitor cell | 5.11e-10 | 67 |
myeloid lineage restricted progenitor cell | 1.49e-09 | 66 |
kidney cell | 2.17e-09 | 17 |
kidney epithelial cell | 2.17e-09 | 17 |
monopoietic cell | 1.11e-08 | 59 |
monocyte | 1.11e-08 | 59 |
monoblast | 1.11e-08 | 59 |
promonocyte | 1.11e-08 | 59 |
macrophage dendritic cell progenitor | 3.90e-08 | 61 |
epithelial cell of nephron | 5.71e-08 | 15 |
myeloid cell | 9.40e-08 | 108 |
common myeloid progenitor | 9.40e-08 | 108 |
kidney cortical cell | 5.06e-07 | 12 |
renal cortical epithelial cell | 5.06e-07 | 12 |
Ontology term | p-value | n |
---|---|---|
bone marrow | 2.20e-08 | 76 |
hematopoietic system | 2.59e-08 | 98 |
blood island | 2.59e-08 | 98 |
nephron epithelium | 5.71e-08 | 15 |
renal tubule | 5.71e-08 | 15 |
nephron tubule | 5.71e-08 | 15 |
nephron | 5.71e-08 | 15 |
uriniferous tubule | 5.71e-08 | 15 |
nephrogenic mesenchyme | 5.71e-08 | 15 |
hemolymphoid system | 1.13e-07 | 108 |
bone element | 1.24e-07 | 82 |
excretory tube | 2.79e-07 | 16 |
kidney epithelium | 2.79e-07 | 16 |
urinary system structure | 3.05e-07 | 47 |
lateral plate mesoderm | 4.25e-07 | 203 |
cortex of kidney | 5.06e-07 | 12 |
renal parenchyma | 5.06e-07 | 12 |
renal system | 5.83e-07 | 48 |
larynx | 6.80e-07 | 9 |
kidney | 6.94e-07 | 26 |
kidney mesenchyme | 6.94e-07 | 26 |
upper urinary tract | 6.94e-07 | 26 |
kidney rudiment | 6.94e-07 | 26 |
kidney field | 6.94e-07 | 26 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.