FFCP PHASE1:Hg19::chr5:158524625..158524669,-: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=1879|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding|HGNC=3126|TSSclassifier=S|UniProt=|association_with_transcript=0bp_to_ENST00000523315_5end|coexpression_cluster_id=C96|description=CAGE_peak_6_at_EBF1_5end|id=chr5:158524625..158524669,-|ontology_enrichment_celltype=CL:0000136!1.07e-09!15;CL:0000057!5.06e-08!75;CL:0000188!1.47e-07!9;CL:0000055!5.21e-07!180|ontology_enrichment_celltype_v019=CL:0000136;1.58e-15;13!CL:0002564;1.90e-10;3!CL:0002570;3.37e-10;8!CL:0000123;1.23e-07;2!CL:0002575;1.23e-07;2!CL:0000242;1.23e-07;2!CL:0002617;2.79e-07;2!CL:0002602;2.79e-07;2|ontology_enrichment_celltype_v019_2=CL:0000136,7.92e-20,15;CL:0002564,5.04e-10,3;CL:0002570,6.56e-10,8;CL:0000242,7.70e-08,2;CL:0002575,1.32e-07,2;CL:0002617,3.87e-07,2;CL:0002602,4.69e-07,2|ontology_enrichment_development_v019=|ontology_enrichment_disease=|ontology_enrichment_disease_v019=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0004457!5.94e-07!12;UBERON:0000042!5.94e-07!12|ontology_enrichment_uberon_v019=UBERON:0011135;4.91e-16;5!UBERON:0002216;4.91e-16;5!UBERON:0011134;4.91e-16;5!UBERON:0002209;4.91e-16;5!UBERON:0002213;4.91e-16;5!UBERON:0007844;4.91e-16;5!UBERON:0011138;4.91e-16;5!UBERON:0001130;4.91e-16;5!UBERON:0001066;4.91e-16;5!UBERON:0001468;4.91e-16;5!UBERON:0004905;5.83e-14;8!UBERON:0000982;5.83e-14;8!UBERON:0004770;5.83e-14;8!UBERON:0002242;1.90e-10;3!UBERON:0001013;6.96e-08;14!UBERON:0006444;2.79e-07;2!UBERON:0001995;2.79e-07;2!UBERON:0004715;2.79e-07;2!UBERON:0005284;8.46e-07;5|ontology_enrichment_uberon_v019_2=UBERON:0011135,2.15e-15,5;UBERON:0002216,2.15e-15,5;UBERON:0011134,2.15e-15,5;UBERON:0002209,2.15e-15,5;UBERON:0002213,2.15e-15,5;UBERON:0005856,2.15e-15,5;UBERON:0005866,2.15e-15,5;UBERON:0005863,2.15e-15,5;UBERON:0007844,2.15e-15,5;UBERON:0011138,2.15e-15,5;UBERON:0001130,2.15e-15,5;UBERON:0001066,2.15e-15,5;UBERON:0001468,2.15e-15,5;UBERON:0004905,1.28e-13,8;UBERON:0000982,1.28e-13,8;UBERON:0004770,1.28e-13,8;UBERON:0002242,5.04e-10,3;UBERON:0003068,5.04e-10,3;UBERON:0002328,5.04e-10,3;UBERON:0004880,5.04e-10,3;UBERON:0001013,1.15e-07,14;UBERON:0006444,4.69e-07,2;UBERON:0001995,4.69e-07,2;UBERON:0004715,4.69e-07,2;UBERON:0005284,7.33e-07,5|phase1_expression=1.45342703416445,1.07050261945492,1.26858963686374,2.00146596706261,0.893922188854576,0,0,0,0.522371256399677,0,0,0,0,1.11389717664042,1.32558950291166,0,0,0,0,0.123121058076788,0,0.626909442956176,0,0,0.627713197974014,0.152826811495903,0.246301768349837,0.472264687882075,0,0,0,0,0,0,0,0,0.293600439334847,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.400395987036012,0,0,0,0.569212969109448,1.17447437874188,0.382273228125229,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.43806866313962,0,0,0.361439152384566,0,0,0,0,0,0,0,0.130979075497713,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.496971951695318,0.379891534993739,0.662045904066094,0.860509862246441,0.354668382198357,0,0,0,0.933633106199299,0.134710672069688,0,4.99479511228274,0.576175924479999,1.40592859100278,0,0,0,0.587172493218824,0.647491777472526,0.421352420106746,0,0,0.103325781175765,0,0.247266929278557,0,0.718618141816238,0.168336113954066,0.875829639103749,0,0,0,0.300476117813194,0,0.717558542755448,0.427114777637135,0,0.300091096084402,0,0.772921620136887,0.18611685633159,0.168776332241266,0.487185025805993,0.757301322732344,0.0920498986422993,0.323292113637624,0,0,0.169560592310488,0,0,0,0,0,0,0.207322110030741,0,0,0,0,1.38134921352481,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.821860859650752,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.448524337381443,0.87192013766656,0.22001485746285,0,3.57656445851882,0.845302752556,0,0,0.257207374262142,0,0.266422179016099,0,0,0,0,0,0,0,0,0,0,0,0,1.91699884393266,5.7430967917057,0,0,0.410952645100767,0,0,0,0,0,0,0,0,0,0,0,0,0,1.10422342547226,1.00034104211935,2.71265023699736,0,0,0,0,0.902838299183157,0,0,1.32845119707087,0,0.0868836144680828,2.54541504701563,1.37257369524342,0.206768026122887,0,0.106727557803444,0,0,0,0.992431231275107,0.920771839728375,0.561320188866147,0.512556597022804,0,0.321707842287215,0,0.616838775210622,0.355123450626254,0.821271560138091,0,0.348631135379878,0,0,0,0,0.182091168006717,0,0,0,0,0,0.105551628892876,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.309123034943167,0.27470839445503,0,0,0,1.6068392984416,0.870036464629098,2.61882649094895,1.68854042198743,1.10269257987624,1.39646318328756,0.725083469571143,0.93749290157711,0.623224249527161,0,0,0,0,0,0.31481234683064,0,0,0,0,0,0.143124886741991,1.48863347743867,3.79655309662471,0,0,0,0.95460974377781,0.78494864019923,0.359744915166629,0.274537029736055,0.353437207037059,0,0,0.421258456238981,0,0,0,0.136499911407986,0,0,0,0,0,1.15755106853338,0,0,0,0,0,0,0,0,0.422215270595328,1.64647446479951,0,0,0,0,0,0.470719003883896,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.557409525377156,12.8399599549036,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| ||
|DPIdataset=robustDPI | |||
|EntrezGene=1879 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=3126 | |||
|TSSclassifier=S | |||
|UniProt= | |||
|association_with_transcript=0bp_to_ENST00000523315_5end | |||
|coexpression_cluster_id=C96 | |||
|description=CAGE_peak_6_at_EBF1_5end | |||
|id=chr5:158524625..158524669,- | |||
|ontology_enrichment_celltype=CL:0000136!1.07e-09!15;CL:0000057!5.06e-08!75;CL:0000188!1.47e-07!9;CL:0000055!5.21e-07!180 | |||
|ontology_enrichment_celltype_v019=CL:0000136;1.58e-15;13!CL:0002564;1.90e-10;3!CL:0002570;3.37e-10;8!CL:0000123;1.23e-07;2!CL:0002575;1.23e-07;2!CL:0000242;1.23e-07;2!CL:0002617;2.79e-07;2!CL:0002602;2.79e-07;2 | |||
|ontology_enrichment_celltype_v019_2=CL:0000136,7.92e-20,15;CL:0002564,5.04e-10,3;CL:0002570,6.56e-10,8;CL:0000242,7.70e-08,2;CL:0002575,1.32e-07,2;CL:0002617,3.87e-07,2;CL:0002602,4.69e-07,2 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0004457!5.94e-07!12;UBERON:0000042!5.94e-07!12 | |||
|ontology_enrichment_uberon_v019=UBERON:0011135;4.91e-16;5!UBERON:0002216;4.91e-16;5!UBERON:0011134;4.91e-16;5!UBERON:0002209;4.91e-16;5!UBERON:0002213;4.91e-16;5!UBERON:0007844;4.91e-16;5!UBERON:0011138;4.91e-16;5!UBERON:0001130;4.91e-16;5!UBERON:0001066;4.91e-16;5!UBERON:0001468;4.91e-16;5!UBERON:0004905;5.83e-14;8!UBERON:0000982;5.83e-14;8!UBERON:0004770;5.83e-14;8!UBERON:0002242;1.90e-10;3!UBERON:0001013;6.96e-08;14!UBERON:0006444;2.79e-07;2!UBERON:0001995;2.79e-07;2!UBERON:0004715;2.79e-07;2!UBERON:0005284;8.46e-07;5 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0011135,2.15e-15,5;UBERON:0002216,2.15e-15,5;UBERON:0011134,2.15e-15,5;UBERON:0002209,2.15e-15,5;UBERON:0002213,2.15e-15,5;UBERON:0005856,2.15e-15,5;UBERON:0005866,2.15e-15,5;UBERON:0005863,2.15e-15,5;UBERON:0007844,2.15e-15,5;UBERON:0011138,2.15e-15,5;UBERON:0001130,2.15e-15,5;UBERON:0001066,2.15e-15,5;UBERON:0001468,2.15e-15,5;UBERON:0004905,1.28e-13,8;UBERON:0000982,1.28e-13,8;UBERON:0004770,1.28e-13,8;UBERON:0002242,5.04e-10,3;UBERON:0003068,5.04e-10,3;UBERON:0002328,5.04e-10,3;UBERON:0004880,5.04e-10,3;UBERON:0001013,1.15e-07,14;UBERON:0006444,4.69e-07,2;UBERON:0001995,4.69e-07,2;UBERON:0004715,4.69e-07,2;UBERON:0005284,7.33e-07,5 | |||
|phase1_expression=1.45342703416445,1.07050261945492,1.26858963686374,2.00146596706261,0.893922188854576,0,0,0,0.522371256399677,0,0,0,0,1.11389717664042,1.32558950291166,0,0,0,0,0.123121058076788,0,0.626909442956176,0,0,0.627713197974014,0.152826811495903,0.246301768349837,0.472264687882075,0,0,0,0,0,0,0,0,0.293600439334847,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.400395987036012,0,0,0,0.569212969109448,1.17447437874188,0.382273228125229,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.43806866313962,0,0,0.361439152384566,0,0,0,0,0,0,0,0.130979075497713,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.496971951695318,0.379891534993739,0.662045904066094,0.860509862246441,0.354668382198357,0,0,0,0.933633106199299,0.134710672069688,0,4.99479511228274,0.576175924479999,1.40592859100278,0,0,0,0.587172493218824,0.647491777472526,0.421352420106746,0,0,0.103325781175765,0,0.247266929278557,0,0.718618141816238,0.168336113954066,0.875829639103749,0,0,0,0.300476117813194,0,0.717558542755448,0.427114777637135,0,0.300091096084402,0,0.772921620136887,0.18611685633159,0.168776332241266,0.487185025805993,0.757301322732344,0.0920498986422993,0.323292113637624,0,0,0.169560592310488,0,0,0,0,0,0,0.207322110030741,0,0,0,0,1.38134921352481,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.821860859650752,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.448524337381443,0.87192013766656,0.22001485746285,0,3.57656445851882,0.845302752556,0,0,0.257207374262142,0,0.266422179016099,0,0,0,0,0,0,0,0,0,0,0,0,1.91699884393266,5.7430967917057,0,0,0.410952645100767,0,0,0,0,0,0,0,0,0,0,0,0,0,1.10422342547226,1.00034104211935,2.71265023699736,0,0,0,0,0.902838299183157,0,0,1.32845119707087,0,0.0868836144680828,2.54541504701563,1.37257369524342,0.206768026122887,0,0.106727557803444,0,0,0,0.992431231275107,0.920771839728375,0.561320188866147,0.512556597022804,0,0.321707842287215,0,0.616838775210622,0.355123450626254,0.821271560138091,0,0.348631135379878,0,0,0,0,0.182091168006717,0,0,0,0,0,0.105551628892876,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.309123034943167,0.27470839445503,0,0,0,1.6068392984416,0.870036464629098,2.61882649094895,1.68854042198743,1.10269257987624,1.39646318328756,0.725083469571143,0.93749290157711,0.623224249527161,0,0,0,0,0,0.31481234683064,0,0,0,0,0,0.143124886741991,1.48863347743867,3.79655309662471,0,0,0,0.95460974377781,0.78494864019923,0.359744915166629,0.274537029736055,0.353437207037059,0,0,0.421258456238981,0,0,0,0.136499911407986,0,0,0,0,0,1.15755106853338,0,0,0,0,0,0,0,0,0.422215270595328,1.64647446479951,0,0,0,0,0,0.470719003883896,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.557409525377156,12.8399599549036,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.31857361344705,0,0,0,0,0,0,0,0,0,0,0,0.597743964753209,0.828851746593443,9.06957892275394,0,0.492339221844278,0.311039587661807,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.73624994933292,0,0,0,0.442317039724898,0.295547618953547,0.438770794307945,0,0,0.923403102045565,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.265372693510018,0,0,0,0,0,1.60515529459758,0.234264445725339,0.364909578431332,0,0,0.394584402849391,0,0.30607276163049,2.78020950365347,0,0,0,0,0,0,0,0,0,0,0,0.34945333648406,0,0,0,0,0.193978032976839,0,0.225980740780532,0,0,0.0633107959558787,0,0,0.85381197895741,0,0,0,1.54435498075768,0,0,0,0,0,0,0,0,0,1.27746588066972,0,0,0,0.687481272035051,0,0,0,0,0.671834724867263,0,0,0,0,0,0,0.169346664131569,0,0,0,0,0,0,0,0.425246896606173,0,0.709251365692784,1.57363764404994,0,0,0,1.42939065274673,0,0,0,0,0,0,0,0,0,0,0,0.129282956361551,0,0,0,0.427149650270779,1.72924735609633,0,0,0,9.0126522801863,0,2.1760712134779,3.5096585163178,2.14441903734423,6.55745261419609,0,0,0,0,0,0.110929051536852,0.310482014706917,0,0,0,0,0,2.81000943484129,1.59413131471908,0.149254802886874,1.40227985908335,2.21922344601045,0,1.25783950876288,0,0,0.453692771289717,0,0.147855149989634,0.318593534327405,0,0,0,0,0,0,0,0,0,0,0,0,0,1.03018711554838,1.01024846629776,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.132864840313363,0,0,0,0,0,0,0,0,0,0,0,10.4873384468994,0.754773679776773,0,0.109209638192014,0,0,0,0,2.86203915588077,36.7495731705841,0,0,0,0.0642292250964595,0,0,0,0,0.0691572524642179,0,0,0,0,0,0,0,0,0.596748666348824,0.676892955143315,0,0,0,0,0,0.202612753855184,0,0,0,0.546974809018219,0,2.97726707033577,0,0,0,0,0,0,0.0887023701626388,0,0,0.135939465953663,0.131545547125698,0,0,0.549451649953598,0,0,2.73947616152849,0,0,0.357382720883282,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.205325613712494,0,3.39997695141398,0,0,0,0,0,0,0.154348316215889,0,0,0.735444965261716,0,0.588925401344836,0.594092800654172,0.4226557275834,0.339854229375634,0.187967835959707,0.45120521581504,0.799529247399431,0,0,0,0.730336388246517,0.458729283404541,0.143339583151451,0,0,0.436350690340377,0.5290268405154,0.743990036333503,0,0,0,0,0,0,0,0,0,0.454672189309436,0,0,0,0.852935927603924,1.90451545170992,0,0.0620747142958579,0,0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| |||
|short_description=p6@EBF1 | |||
}} |
Revision as of 14:28, 13 September 2013
Short description: | p6@EBF1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_6_at_EBF1_5end |
Coexpression cluster: | C96_non_acute_tonsil_spleen_Burkitt_lymphoma_appendix |
Association with transcript: | 0bp_to_ENST00000523315_5end |
EntrezGene: | EBF1 |
HGNC: | 3126 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
fat cell | 7.92e-20 | 15 |
nucleus pulposus cell of intervertebral disc | 5.04e-10 | 3 |
mesenchymal stem cell of adipose | 6.56e-10 | 8 |
Merkel cell | 7.70e-08 | 2 |
central nervous system pericyte | 1.32e-07 | 2 |
adipocyte of breast | 3.87e-07 | 2 |
annulus pulposus cell | 4.69e-07 | 2 |
Ontology term | p-value | n |
---|---|---|
intervertebral cartilage | 2.15e-15 | 5 |
symphysis | 2.15e-15 | 5 |
nonsynovial joint | 2.15e-15 | 5 |
fibrous joint | 2.15e-15 | 5 |
cartilaginous joint | 2.15e-15 | 5 |
developing mesenchymal condensation | 2.15e-15 | 5 |
pre-cartilage condensation | 2.15e-15 | 5 |
cartilaginous condensation | 2.15e-15 | 5 |
cartilage element | 2.15e-15 | 5 |
post-cranial axial skeletal system | 2.15e-15 | 5 |
vertebral column | 2.15e-15 | 5 |
intervertebral disk | 2.15e-15 | 5 |
intervertebral joint | 2.15e-15 | 5 |
articulation | 1.28e-13 | 8 |
skeletal joint | 1.28e-13 | 8 |
articular system | 1.28e-13 | 8 |
nucleus pulposus | 5.04e-10 | 3 |
axial mesoderm | 5.04e-10 | 3 |
notochord | 5.04e-10 | 3 |
chordamesoderm | 5.04e-10 | 3 |
adipose tissue | 1.15e-07 | 14 |
annulus fibrosus | 4.69e-07 | 2 |
fibrocartilage | 4.69e-07 | 2 |
annulus fibrosus disci intervertebralis | 4.69e-07 | 2 |
brain vasculature | 7.33e-07 | 5 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.