FFCP PHASE1:Hg19::chr5:142077232..142077314,-: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=2246|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding|HGNC=3665|TSSclassifier=N|UniProt=|association_with_transcript=302bp_to_ENST00000489937,ENST00000494344_5end|coexpression_cluster_id=C4470|description=CAGE_peak_5_at_FGF1_5end|id=chr5:142077232..142077314,-|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019=CL:0000138;4.25e-12;6!CL:0000153;5.04e-11;9!CL:0000447;5.04e-11;9|ontology_enrichment_celltype_v019_2=CL:0000058,4.46e-12,6;CL:0000138,4.46e-12,6;CL:0000153,4.85e-11,9;CL:0000447,4.85e-11,9|ontology_enrichment_development_v019=UBERON:0006601;1.63e-16;82!UBERON:0006241;1.12e-08;3!UBERON:0003057;1.12e-08;3|ontology_enrichment_disease=|ontology_enrichment_disease_v019=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0007023!1.12e-62!115;UBERON:0001049!2.71e-33!57;UBERON:0005068!2.71e-33!57;UBERON:0006241!2.71e-33!57;UBERON:0007135!2.71e-33!57;UBERON:0002616!1.55e-27!59;UBERON:0002780!1.10e-25!41;UBERON:0001890!1.10e-25!41;UBERON:0006240!1.10e-25!41;UBERON:0003080!8.30e-25!42;UBERON:0002346!1.89e-24!90;UBERON:0002020!2.49e-24!34;UBERON:0003528!2.49e-24!34;UBERON:0003075!3.17e-24!86;UBERON:0007284!3.17e-24!86;UBERON:0001893!4.30e-24!34;UBERON:0001017!5.00e-24!82;UBERON:0000955!1.11e-23!69;UBERON:0006238!1.11e-23!69;UBERON:0005743!2.38e-23!86;UBERON:0002791!4.99e-23!33;UBERON:0001869!9.26e-22!32;UBERON:0000073!1.33e-20!94;UBERON:0001016!1.33e-20!94;UBERON:0002619!6.08e-17!22;UBERON:0001950!8.86e-17!20;UBERON:0003056!7.97e-15!61;UBERON:0000956!3.08e-14!25;UBERON:0000203!3.08e-14!25;UBERON:0000153!1.40e-13!129;UBERON:0007811!1.40e-13!129;UBERON:0002308!1.20e-12!9;UBERON:0000125!1.20e-12!9;UBERON:0002420!1.61e-12!9;UBERON:0007245!1.61e-12!9;UBERON:0010009!1.61e-12!9;UBERON:0010011!1.61e-12!9;UBERON:0000454!1.61e-12!9;UBERON:0000033!4.01e-12!123;UBERON:0009663!4.35e-10!7;UBERON:0000924!9.54e-10!173;UBERON:0006601!9.54e-10!173;UBERON:0003076!1.60e-09!15;UBERON:0003057!1.60e-09!15;UBERON:0004121!2.23e-09!169;UBERON:0002298!6.30e-09!8;UBERON:0000200!3.58e-08!6;UBERON:0000025!4.14e-08!194;UBERON:0000475!3.02e-07!365|ontology_enrichment_uberon_v019=UBERON:0001893;7.40e-36;34!UBERON:0003528;5.93e-35;34!UBERON:0002020;5.93e-35;34!UBERON:0002791;2.74e-34;32!UBERON:0001869;2.12e-33;32!UBERON:0002780;9.23e-33;41!UBERON:0001890;9.23e-33;41!UBERON:0000073;2.54e-29;53!UBERON:0002616;2.54e-29;53!UBERON:0002619;4.37e-27;22!UBERON:0001950;3.34e-26;20!UBERON:0000956;1.96e-23;25!UBERON:0000203;1.96e-23;25!UBERON:0000125;3.97e-23;9!UBERON:0002308;3.97e-23;9!UBERON:0002420;8.41e-23;9!UBERON:0007245;8.41e-23;9!UBERON:0010009;8.41e-23;9!UBERON:0010011;8.41e-23;9!UBERON:0000454;8.41e-23;9!UBERON:0001017;1.78e-18;75!UBERON:0009663;3.81e-18;7!UBERON:0000955;1.16e-16;68!UBERON:0002298;3.12e-16;6!UBERON:0000200;1.63e-14;6!UBERON:0007023;3.97e-14;114!UBERON:0001016;7.30e-14;83!UBERON:0000369;1.44e-10;4!UBERON:0002435;1.44e-10;4!UBERON:0000204;1.44e-10;4!UBERON:0000988;3.68e-09;3!UBERON:0000349;5.19e-09;5!UBERON:0001871;6.91e-09;6!UBERON:0001896;9.06e-09;3!UBERON:0005290;9.06e-09;3!UBERON:0002240;1.12e-08;3!UBERON:0005174;1.12e-08;3!UBERON:0001137;1.12e-08;3!UBERON:0001870;2.88e-08;3!UBERON:0005383;3.48e-08;3!UBERON:0005382;3.48e-08;3!UBERON:0002021;5.23e-08;5!UBERON:0004733;1.08e-07;12!UBERON:0002028;1.08e-07;12!UBERON:0004732;4.89e-07;13|ontology_enrichment_uberon_v019_2=UBERON:0001049,2.44e-59,56;UBERON:0005068,2.44e-59,56;UBERON:0006241,2.44e-59,56;UBERON:0007135,2.44e-59,56;UBERON:0000073,7.55e-53,53;UBERON:0002616,7.55e-53,53;UBERON:0007023,1.94e-52,114;UBERON:0002780,5.84e-47,41;UBERON:0001890,5.84e-47,41;UBERON:0003080,5.84e-47,41;UBERON:0006240,5.84e-47,41;UBERON:0003528,5.52e-43,34;UBERON:0002020,5.52e-43,34;UBERON:0001893,1.55e-42,34;UBERON:0003075,5.13e-42,82;UBERON:0007284,5.13e-42,82;UBERON:0001017,1.18e-41,81;UBERON:0000955,8.96e-41,68;UBERON:0006238,8.96e-41,68;UBERON:0002346,1.51e-39,86;UBERON:0002791,2.28e-38,32;UBERON:0001869,4.94e-38,32;UBERON:0001016,1.92e-36,89;UBERON:0010371,8.76e-31,104;UBERON:0010314,4.04e-29,132;UBERON:0003056,5.28e-29,61;UBERON:0002619,2.65e-27,22;UBERON:0001950,2.02e-26,20;UBERON:0000956,1.27e-23,25;UBERON:0000203,1.27e-23,25;UBERON:0000125,3.25e-23,9;UBERON:0002308,3.25e-23,9;UBERON:0002420,5.76e-23,9;UBERON:0007245,5.76e-23,9;UBERON:0010009,5.76e-23,9;UBERON:0010011,5.76e-23,9;UBERON:0000454,5.76e-23,9;UBERON:0004121,2.86e-19,171;UBERON:0000924,2.86e-19,171;UBERON:0006601,2.86e-19,171;UBERON:0009663,3.29e-18,7;UBERON:0002298,2.48e-16,6;UBERON:0000025,3.06e-16,192;UBERON:0000200,1.79e-14,6;UBERON:0011216,2.10e-14,223;UBERON:0003076,3.32e-13,15;UBERON:0003057,3.32e-13,15;UBERON:0004111,6.10e-13,240;UBERON:0000369,1.10e-10,4;UBERON:0002435,1.10e-10,4;UBERON:0000204,1.10e-10,4;UBERON:0010082,1.10e-10,4;UBERON:0000988,3.69e-09,3;UBERON:0000349,4.14e-09,5;UBERON:0001871,6.64e-09,6;UBERON:0001896,7.18e-09,3;UBERON:0005290,7.18e-09,3;UBERON:0010096,7.18e-09,3;UBERON:0002240,1.06e-08,3;UBERON:0005174,1.06e-0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| ||
|DPIdataset=robustDPI | |||
|EntrezGene=2246 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=3665 | |||
|TSSclassifier=N | |||
|UniProt= | |||
|association_with_transcript=302bp_to_ENST00000489937,ENST00000494344_5end | |||
|coexpression_cluster_id=C4470 | |||
|description=CAGE_peak_5_at_FGF1_5end | |||
|id=chr5:142077232..142077314,- | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019=CL:0000138;4.25e-12;6!CL:0000153;5.04e-11;9!CL:0000447;5.04e-11;9 | |||
|ontology_enrichment_celltype_v019_2=CL:0000058,4.46e-12,6;CL:0000138,4.46e-12,6;CL:0000153,4.85e-11,9;CL:0000447,4.85e-11,9 | |||
|ontology_enrichment_development_v019=UBERON:0006601;1.63e-16;82!UBERON:0006241;1.12e-08;3!UBERON:0003057;1.12e-08;3 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007023!1.12e-62!115;UBERON:0001049!2.71e-33!57;UBERON:0005068!2.71e-33!57;UBERON:0006241!2.71e-33!57;UBERON:0007135!2.71e-33!57;UBERON:0002616!1.55e-27!59;UBERON:0002780!1.10e-25!41;UBERON:0001890!1.10e-25!41;UBERON:0006240!1.10e-25!41;UBERON:0003080!8.30e-25!42;UBERON:0002346!1.89e-24!90;UBERON:0002020!2.49e-24!34;UBERON:0003528!2.49e-24!34;UBERON:0003075!3.17e-24!86;UBERON:0007284!3.17e-24!86;UBERON:0001893!4.30e-24!34;UBERON:0001017!5.00e-24!82;UBERON:0000955!1.11e-23!69;UBERON:0006238!1.11e-23!69;UBERON:0005743!2.38e-23!86;UBERON:0002791!4.99e-23!33;UBERON:0001869!9.26e-22!32;UBERON:0000073!1.33e-20!94;UBERON:0001016!1.33e-20!94;UBERON:0002619!6.08e-17!22;UBERON:0001950!8.86e-17!20;UBERON:0003056!7.97e-15!61;UBERON:0000956!3.08e-14!25;UBERON:0000203!3.08e-14!25;UBERON:0000153!1.40e-13!129;UBERON:0007811!1.40e-13!129;UBERON:0002308!1.20e-12!9;UBERON:0000125!1.20e-12!9;UBERON:0002420!1.61e-12!9;UBERON:0007245!1.61e-12!9;UBERON:0010009!1.61e-12!9;UBERON:0010011!1.61e-12!9;UBERON:0000454!1.61e-12!9;UBERON:0000033!4.01e-12!123;UBERON:0009663!4.35e-10!7;UBERON:0000924!9.54e-10!173;UBERON:0006601!9.54e-10!173;UBERON:0003076!1.60e-09!15;UBERON:0003057!1.60e-09!15;UBERON:0004121!2.23e-09!169;UBERON:0002298!6.30e-09!8;UBERON:0000200!3.58e-08!6;UBERON:0000025!4.14e-08!194;UBERON:0000475!3.02e-07!365 | |||
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|short_description=p5@FGF1 | |||
}} |
Revision as of 13:41, 13 September 2013
Short description: | p5@FGF1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_5_at_FGF1_5end |
Coexpression cluster: | C4470_Chondrocyte_substantia_globus_kidney_spinal_diencephalon_medulla |
Association with transcript: | 302bp_to_ENST00000489937, ENST00000494344_5end |
EntrezGene: | FGF1 |
HGNC: | 3665 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
chondroblast | 4.46e-12 | 6 |
chondrocyte | 4.46e-12 | 6 |
GAG secreting cell | 4.85e-11 | 9 |
carbohydrate secreting cell | 4.85e-11 | 9 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.