FFCP PHASE1:Hg19::chr5:78065820..78065833,-: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=10184|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding|HGNC=6588|TSSclassifier=S|UniProt=|association_with_transcript=10bp_to_ENST00000514587_5end|coexpression_cluster_id=C62|description=CAGE_peak_27_at_LHFPL2_5end|id=chr5:78065820..78065833,-|ontology_enrichment_celltype=CL:0000819!2.37e-29!1;CL:0000945!2.44e-19!24;CL:0000826!2.44e-19!24;CL:0000785!2.05e-15!2;CL:0000955!2.05e-15!2;CL:0000818!2.05e-15!2;CL:0000954!2.05e-15!2;CL:0000816!2.05e-15!2;CL:0000817!9.90e-11!3;CL:0000838!3.30e-09!52;CL:0000542!4.83e-09!53;CL:0000051!4.83e-09!53|ontology_enrichment_celltype_v019=|ontology_enrichment_celltype_v019_2=|ontology_enrichment_development_v019=UBERON:0001045;2.55e-98;1|ontology_enrichment_disease=DOID:0060058!1.98e-45!10;DOID:0060073!2.37e-29!1;DOID:8675!2.37e-29!1;DOID:2531!2.22e-09!51;DOID:0060083!2.22e-09!51|ontology_enrichment_disease_v019=DOID:0060058;2.73e-11;10|ontology_enrichment_disease_v019_2=DOID:0060058,2.73e-11,10|ontology_enrichment_uberon=UBERON:0001154!9.99e-30!1;UBERON:0001153!9.99e-30!1;UBERON:0002372!1.33e-29!1;UBERON:0001961!1.33e-29!1;UBERON:0001744!1.33e-29!1;UBERON:0001735!1.33e-29!1;UBERON:0004907!5.08e-07!5;UBERON:0001046!6.38e-07!19|ontology_enrichment_uberon_v019=UBERON:0001154;2.55e-98;1!UBERON:0001153;2.55e-98;1!UBERON:0009854;2.55e-98;1!UBERON:0009856;7.14e-26;4!UBERON:0004907;5.15e-21;5!UBERON:0001155;2.45e-12;9!UBERON:0000059;2.37e-10;11!UBERON:0000160;7.60e-07;17|ontology_enrichment_uberon_v019_2=UBERON:0001154,2.55e-98,1;UBERON:0001153,2.55e-98,1;UBERON:0001045,2.55e-98,1;UBERON:0004907,5.15e-21,5;UBERON:0001155,2.45e-12,9;UBERON:0000059,2.37e-10,11;UBERON:0000160,7.60e-07,17|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,8.67632646499378,0.284338464974843,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.48655523978033,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.364909578431332,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.60896299190448,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.078493092850514,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.80822463617505,0,0,0,0,0,0,0,0,0,0,0,0|short_description=p27@LHFPL2}} | ||
|DPIdataset=robustDPI | |||
|EntrezGene=10184 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=6588 | |||
|TSSclassifier=S | |||
|UniProt= | |||
|association_with_transcript=10bp_to_ENST00000514587_5end | |||
|coexpression_cluster_id=C62 | |||
|description=CAGE_peak_27_at_LHFPL2_5end | |||
|id=chr5:78065820..78065833,- | |||
|ontology_enrichment_celltype=CL:0000819!2.37e-29!1;CL:0000945!2.44e-19!24;CL:0000826!2.44e-19!24;CL:0000785!2.05e-15!2;CL:0000955!2.05e-15!2;CL:0000818!2.05e-15!2;CL:0000954!2.05e-15!2;CL:0000816!2.05e-15!2;CL:0000817!9.90e-11!3;CL:0000838!3.30e-09!52;CL:0000542!4.83e-09!53;CL:0000051!4.83e-09!53 | |||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019=UBERON:0001045;2.55e-98;1 | |||
|ontology_enrichment_disease=DOID:0060058!1.98e-45!10;DOID:0060073!2.37e-29!1;DOID:8675!2.37e-29!1;DOID:2531!2.22e-09!51;DOID:0060083!2.22e-09!51 | |||
|ontology_enrichment_disease_v019=DOID:0060058;2.73e-11;10 | |||
|ontology_enrichment_disease_v019_2=DOID:0060058,2.73e-11,10 | |||
|ontology_enrichment_uberon=UBERON:0001154!9.99e-30!1;UBERON:0001153!9.99e-30!1;UBERON:0002372!1.33e-29!1;UBERON:0001961!1.33e-29!1;UBERON:0001744!1.33e-29!1;UBERON:0001735!1.33e-29!1;UBERON:0004907!5.08e-07!5;UBERON:0001046!6.38e-07!19 | |||
|ontology_enrichment_uberon_v019=UBERON:0001154;2.55e-98;1!UBERON:0001153;2.55e-98;1!UBERON:0009854;2.55e-98;1!UBERON:0009856;7.14e-26;4!UBERON:0004907;5.15e-21;5!UBERON:0001155;2.45e-12;9!UBERON:0000059;2.37e-10;11!UBERON:0000160;7.60e-07;17 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001154,2.55e-98,1;UBERON:0001153,2.55e-98,1;UBERON:0001045,2.55e-98,1;UBERON:0004907,5.15e-21,5;UBERON:0001155,2.45e-12,9;UBERON:0000059,2.37e-10,11;UBERON:0000160,7.60e-07,17 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,8.67632646499378,0.284338464974843,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.48655523978033,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.364909578431332,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.60896299190448,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.078493092850514,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.80822463617505,0,0,0,0,0,0,0,0,0,0,0,0 | |||
|short_description=p27@LHFPL2 | |||
}} |
Revision as of 16:33, 13 September 2013
Short description: | p27@LHFPL2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_27_at_LHFPL2_5end |
Coexpression cluster: | C62_Burkitt_tonsil_CD19_submaxillary_spleen_salivary_lymph |
Association with transcript: | 10bp_to_ENST00000514587_5end |
EntrezGene: | LHFPL2 |
HGNC: | 6588 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
vermiform appendix | 2.55e-98 | 1 |
caecum | 2.55e-98 | 1 |
midgut | 2.55e-98 | 1 |
lower digestive tract | 5.15e-21 | 5 |
colon | 2.45e-12 | 9 |
large intestine | 2.37e-10 | 11 |
intestine | 7.60e-07 | 17 |
Ontology term | p-value | n |
---|---|---|
lymphoma | 2.73e-11 | 10 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.