FFCP PHASE1:Hg19::chr4:90229127..90229138,-: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=285513|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding|HGNC=27733|TSSclassifier=S|UniProt=Q6ZVF9|association_with_transcript=22bp_to_ENST00000333209,NM_198281,uc003hsm.1_5end|description=CAGE_peak_4_at_GPRIN3_5end|id=chr4:90229127..90229138,-|ontology_enrichment_celltype=CL:0000791!8.59e-11!18;CL:0000789!8.59e-11!18;CL:0002420!8.59e-11!18;CL:0002419!8.59e-11!18;CL:0000790!8.59e-11!18;CL:0000084!4.51e-09!25;CL:0000827!4.51e-09!25;CL:0000624!1.21e-07!6|ontology_enrichment_celltype_v019=CL:0002127;3.94e-11;1!CL:0000911;3.94e-11;1!CL:0000814;3.94e-11;1!CL:0000895;9.49e-11;1!CL:0000624;3.46e-07;6!CL:0000235;3.46e-07;6|ontology_enrichment_celltype_v019_2=CL:0000893,5.94e-20,2;CL:0002489,5.94e-20,2;CL:0000809,5.94e-20,2;CL:0000808,5.94e-20,2;CL:0000894,5.94e-20,2;CL:0000806,5.94e-20,2;CL:0000807,5.94e-20,2;CL:0000805,5.94e-20,2;CL:0002425,5.94e-20,2;CL:0002127,4.58e-11,1;CL:0000914,4.58e-11,1;CL:0000911,4.58e-11,1;CL:0000814,4.58e-11,1;CL:0002042,4.58e-11,1;CL:0002039,4.58e-11,1;CL:0002040,4.58e-11,1;CL:0002041,4.58e-11,1;CL:0000810,1.21e-10,1;CL:0000895,1.21e-10,1;CL:0002436,1.21e-10,1;CL:0002427,1.21e-10,1;CL:0002428,1.21e-10,1;CL:0002429,1.21e-10,1;CL:0002433,1.21e-10,1;CL:0002431,1.21e-10,1;CL:0002432,1.21e-10,1;CL:0000235,3.80e-07,6;CL:0000624,4.44e-07,6|ontology_enrichment_development_v019=UBERON:0006215;1.34e-29;3!CL:0002425;4.03e-20;2!CL:0002427;9.49e-11;1!UBERON:0004140;9.49e-11;1|ontology_enrichment_disease=|ontology_enrichment_disease_v019=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0007023!1.66e-15!115;UBERON:0001049!1.53e-11!57;UBERON:0005068!1.53e-11!57;UBERON:0006241!1.53e-11!57;UBERON:0007135!1.53e-11!57;UBERON:0000955!9.96e-11!69;UBERON:0006238!9.96e-11!69;UBERON:0002616!1.13e-10!59;UBERON:0001017!7.05e-10!82;UBERON:0005743!1.26e-09!86;UBERON:0002780!2.67e-09!41;UBERON:0001890!2.67e-09!41;UBERON:0006240!2.67e-09!41;UBERON:0000073!5.99e-09!94;UBERON:0001016!5.99e-09!94;UBERON:0003080!6.34e-09!42;UBERON:0003075!6.00e-08!86;UBERON:0007284!6.00e-08!86;UBERON:0002346!3.52e-07!90|ontology_enrichment_uberon_v019=UBERON:0002037;3.97e-15;6!UBERON:0003296;1.54e-10;4!UBERON:0010133;1.54e-10;4!UBERON:0002680;2.87e-10;9!UBERON:0001895;2.87e-10;9!UBERON:0004733;8.00e-08;12!UBERON:0002028;8.00e-08;12!UBERON:0004732;2.95e-07;13|ontology_enrichment_uberon_v019_2=UBERON:0002037,3.45e-15,6;UBERON:0006215,3.45e-15,6;UBERON:0003296,1.62e-10,4;UBERON:0010133,1.62e-10,4;UBERON:0002370,1.86e-10,4;UBERON:0005058,1.86e-10,4;UBERON:0009113,1.86e-10,4;UBERON:0003295,1.86e-10,4;UBERON:0005562,1.86e-10,4;UBERON:0002680,2.61e-10,9;UBERON:0001895,2.61e-10,9;UBERON:0010092,2.61e-10,9;UBERON:0004733,7.46e-08,12;UBERON:0002028,7.46e-08,12;UBERON:0007277,7.46e-08,12;UBERON:0004732,2.77e-07,13;UBERON:0003351,2.96e-07,6|phase1_expression=0,0,0.140954404095971,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.154816123316076,0,0,0,0,0,0,0,0.401088894940283,0.434021741431704,0.223915474239924,0.32389366601898,0,0.726991193897824,0,0.242584061187816,0,0,0,0,0,0,0,0,0,0.188242339542605,0.272906150057846,0,0,0,0.639337125799041,0,0,0,0,0,0,0.251248665256743,0,0,0,0.368277635987565,0.316462387440884,0,0,0,0,0.150176892841506,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.560508562981536,0,0.983548850569165,0.393010762749165,1.02800749499755,0.334372990781356,0.32592226663359,0.473447805734733,0,0.668462741311041,0.294605907474837,0.443067789167242,1.89562704635511,1.0247305578054,0.130059347559878,0.164437904603676,0,0.289803085735052,0,0,0,0.679856056185397,1.14966148080576,0.34362744548263,0.759059076058509,0.318565414324097,0,0,0.150575119077773,0.383959833463255,0,0.236777252044017,0,0.80642697289893,0.802320587350522,0.868946423296794,0,0,0,0,0,0,0,0,0,0.221729397462564,0,0.196468613246569,0,0,0,0,0.132957960518865,0,0,0.371457501329565,0,0,0,0,0,0,0,0,0,0.33472061276467,0,0,0.24406205754817,0,0.81014194788176,0,0,0,0,0,0.183201743930407,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.234004265139238,1.0404181360211,0,0,0,0,0,0,0,0,0,0,0,0.190493682876507,0.763976851116555,0,0,0.102827492703324,0,0.571652865261156,0,0,0,0.129271715757778,0,0.845302752556,0,0,0,0,0,0,0,0,0,0,0,0.602878754119172,0.871533458600294,0.399891964728228,1.2162378064119,0.502257091432126,0,0,0,0,0,0,0,2.01753259188349,0.985153801009636,0.431255149719035,0.513372145118994,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.206768026122887,0,0.106727557803444,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.105551628892876,0,0,0.215915916102139,0,0,0,0,0,0,0,0,0,0,0,0.103041011647722,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.190630193923825,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.281695602532241,0,0,0,0,0,0,0,0,0,0,0,0.0941438007767792,0,0,0,0,0.507447609232169,0,0,0,0,0,0,0,0.320472213382419,0.962479855263359,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| ||
|DPIdataset=robustDPI | |||
|EntrezGene=285513 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=27733 | |||
|TSSclassifier=S | |||
|UniProt=Q6ZVF9 | |||
|association_with_transcript=22bp_to_ENST00000333209,NM_198281,uc003hsm.1_5end | |||
|description=CAGE_peak_4_at_GPRIN3_5end | |||
|id=chr4:90229127..90229138,- | |||
|ontology_enrichment_celltype=CL:0000791!8.59e-11!18;CL:0000789!8.59e-11!18;CL:0002420!8.59e-11!18;CL:0002419!8.59e-11!18;CL:0000790!8.59e-11!18;CL:0000084!4.51e-09!25;CL:0000827!4.51e-09!25;CL:0000624!1.21e-07!6 | |||
|ontology_enrichment_celltype_v019=CL:0002127;3.94e-11;1!CL:0000911;3.94e-11;1!CL:0000814;3.94e-11;1!CL:0000895;9.49e-11;1!CL:0000624;3.46e-07;6!CL:0000235;3.46e-07;6 | |||
|ontology_enrichment_celltype_v019_2=CL:0000893,5.94e-20,2;CL:0002489,5.94e-20,2;CL:0000809,5.94e-20,2;CL:0000808,5.94e-20,2;CL:0000894,5.94e-20,2;CL:0000806,5.94e-20,2;CL:0000807,5.94e-20,2;CL:0000805,5.94e-20,2;CL:0002425,5.94e-20,2;CL:0002127,4.58e-11,1;CL:0000914,4.58e-11,1;CL:0000911,4.58e-11,1;CL:0000814,4.58e-11,1;CL:0002042,4.58e-11,1;CL:0002039,4.58e-11,1;CL:0002040,4.58e-11,1;CL:0002041,4.58e-11,1;CL:0000810,1.21e-10,1;CL:0000895,1.21e-10,1;CL:0002436,1.21e-10,1;CL:0002427,1.21e-10,1;CL:0002428,1.21e-10,1;CL:0002429,1.21e-10,1;CL:0002433,1.21e-10,1;CL:0002431,1.21e-10,1;CL:0002432,1.21e-10,1;CL:0000235,3.80e-07,6;CL:0000624,4.44e-07,6 | |||
|ontology_enrichment_development_v019=UBERON:0006215;1.34e-29;3!CL:0002425;4.03e-20;2!CL:0002427;9.49e-11;1!UBERON:0004140;9.49e-11;1 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007023!1.66e-15!115;UBERON:0001049!1.53e-11!57;UBERON:0005068!1.53e-11!57;UBERON:0006241!1.53e-11!57;UBERON:0007135!1.53e-11!57;UBERON:0000955!9.96e-11!69;UBERON:0006238!9.96e-11!69;UBERON:0002616!1.13e-10!59;UBERON:0001017!7.05e-10!82;UBERON:0005743!1.26e-09!86;UBERON:0002780!2.67e-09!41;UBERON:0001890!2.67e-09!41;UBERON:0006240!2.67e-09!41;UBERON:0000073!5.99e-09!94;UBERON:0001016!5.99e-09!94;UBERON:0003080!6.34e-09!42;UBERON:0003075!6.00e-08!86;UBERON:0007284!6.00e-08!86;UBERON:0002346!3.52e-07!90 | |||
|ontology_enrichment_uberon_v019=UBERON:0002037;3.97e-15;6!UBERON:0003296;1.54e-10;4!UBERON:0010133;1.54e-10;4!UBERON:0002680;2.87e-10;9!UBERON:0001895;2.87e-10;9!UBERON:0004733;8.00e-08;12!UBERON:0002028;8.00e-08;12!UBERON:0004732;2.95e-07;13 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002037,3.45e-15,6;UBERON:0006215,3.45e-15,6;UBERON:0003296,1.62e-10,4;UBERON:0010133,1.62e-10,4;UBERON:0002370,1.86e-10,4;UBERON:0005058,1.86e-10,4;UBERON:0009113,1.86e-10,4;UBERON:0003295,1.86e-10,4;UBERON:0005562,1.86e-10,4;UBERON:0002680,2.61e-10,9;UBERON:0001895,2.61e-10,9;UBERON:0010092,2.61e-10,9;UBERON:0004733,7.46e-08,12;UBERON:0002028,7.46e-08,12;UBERON:0007277,7.46e-08,12;UBERON:0004732,2.77e-07,13;UBERON:0003351,2.96e-07,6 | |||
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|short_description=p4@GPRIN3 | |||
}} |
Revision as of 12:18, 13 September 2013
Short description: | p4@GPRIN3 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_4_at_GPRIN3_5end |
Coexpression cluster: | NA |
Association with transcript: | 22bp_to_ENST00000333209, NM_198281, uc003hsm.1_5end |
EntrezGene: | GPRIN3 |
HGNC: | 27733 |
UniProt: | Q6ZVF9 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
cerebellum | 3.45e-15 | 6 |
rhombic lip | 3.45e-15 | 6 |
gland of diencephalon | 1.62e-10 | 4 |
neuroendocrine gland | 1.62e-10 | 4 |
thymus | 1.86e-10 | 4 |
hemolymphoid system gland | 1.86e-10 | 4 |
thymic region | 1.86e-10 | 4 |
pharyngeal gland | 1.86e-10 | 4 |
thymus primordium | 1.86e-10 | 4 |
regional part of metencephalon | 2.61e-10 | 9 |
metencephalon | 2.61e-10 | 9 |
future metencephalon | 2.61e-10 | 9 |
segmental subdivision of hindbrain | 7.46e-08 | 12 |
hindbrain | 7.46e-08 | 12 |
presumptive hindbrain | 7.46e-08 | 12 |
segmental subdivision of nervous system | 2.77e-07 | 13 |
pharyngeal epithelium | 2.96e-07 | 6 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.