FFCP PHASE1:Hg19::chr4:74283826..74283880,+: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=213|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding|HGNC=399|TSSclassifier=S|UniProt=|association_with_transcript=103bp_to_ENST00000486939_5end|coexpression_cluster_id=C5|description=CAGE_peak_12_at_ALB_5end|id=chr4:74283826..74283880,+|ontology_enrichment_celltype=CL:0000181!1.49e-31!12;CL:0000417!1.49e-31!12;CL:0000668!1.49e-31!12;CL:0000414!1.49e-31!12;CL:0000412!1.49e-31!12;CL:0000182!1.49e-31!12;CL:0000223!2.04e-09!59|ontology_enrichment_celltype_v019=CL:0000182;2.58e-49;12|ontology_enrichment_celltype_v019_2=CL:0000182,2.58e-49,12;CL:0000223,1.34e-13,58|ontology_enrichment_development_v019=UBERON:0004161;1.86e-37;11!UBERON:0009497;9.79e-32;13!UBERON:0001041;7.66e-14;30!UBERON:0003104;2.25e-13;31!CL:0000223;3.46e-10;58|ontology_enrichment_disease=DOID:178!4.54e-09!1;DOID:326!4.54e-09!1;DOID:3978!4.54e-09!1;DOID:3394!4.54e-09!1;DOID:5844!4.54e-09!1|ontology_enrichment_disease_v019=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0005057!1.67e-34!26;UBERON:0009854!1.02e-32!23;UBERON:0002107!1.76e-32!19;UBERON:0006925!1.76e-32!19;UBERON:0008836!1.76e-32!19;UBERON:0009856!9.25e-29!26;UBERON:0008835!7.11e-28!22;UBERON:0003894!7.11e-28!22;UBERON:0002368!3.77e-25!35;UBERON:0007499!2.27e-24!25;UBERON:0009497!2.27e-24!25;UBERON:0000015!2.27e-24!25;UBERON:0002423!2.27e-24!25;UBERON:0006235!2.27e-24!25;UBERON:0004161!2.27e-24!25;UBERON:0000949!7.09e-23!45;UBERON:0003929!5.13e-22!54;UBERON:0002365!2.15e-19!31;UBERON:0002330!2.15e-19!31;UBERON:0002530!6.89e-17!59;UBERON:0005172!2.10e-15!55;UBERON:0005173!2.10e-15!55;UBERON:0002417!1.06e-13!61;UBERON:0000916!1.06e-13!61;UBERON:0005911!1.07e-13!82;UBERON:0004921!1.11e-10!129;UBERON:0004185!1.11e-10!129;UBERON:0001007!9.49e-10!155;UBERON:0001555!9.49e-10!155;UBERON:0007026!9.49e-10!155;UBERON:0001041!2.31e-09!98;UBERON:0000077!3.75e-09!130;UBERON:0002146!4.19e-09!1;UBERON:0005623!4.19e-09!1;UBERON:0001301!4.91e-09!1;UBERON:0001154!5.75e-09!1;UBERON:0001153!5.75e-09!1;UBERON:0002336!8.49e-09!1;UBERON:0001018!8.49e-09!1;UBERON:0002473!8.49e-09!1;UBERON:0005340!8.49e-09!1;UBERON:0002316!8.49e-09!1;UBERON:0003544!8.49e-09!1;UBERON:0001020!8.49e-09!1;UBERON:0005970!8.49e-09!1;UBERON:0002437!8.49e-09!1;UBERON:0004119!1.06e-08!169;UBERON:0000925!1.06e-08!169;UBERON:0006595!1.06e-08!169;UBERON:0005177!1.96e-08!107;UBERON:0000466!3.85e-08!126;UBERON:0001048!1.27e-07!168;UBERON:0000490!3.42e-07!138|ontology_enrichment_uberon_v019=UBERON:0002107;3.89e-55;19!UBERON:0006925;3.89e-55;19!UBERON:0002423;7.73e-42;25!UBERON:0002365;2.13e-32;31!UBERON:0002330;2.13e-32;31!UBERON:0002368;1.41e-28;33!UBERON:0000949;5.33e-25;43!UBERON:0005172;1.69e-12;52!UBERON:0005173;1.69e-12;52!UBERON:0002417;5.80e-11;58!UBERON:0000916;5.80e-11;58!UBERON:0002530;7.53e-11;57!UBERON:0001007;5.36e-10;81|ontology_enrichment_uberon_v019_2=UBERON:0002107,3.89e-55,19;UBERON:0006925,3.89e-55,19;UBERON:0008836,3.89e-55,19;UBERON:0008835,1.39e-47,22;UBERON:0003894,1.39e-47,22;UBERON:0009854,1.68e-45,23;UBERON:0007499,7.73e-42,25;UBERON:0009497,7.73e-42,25;UBERON:0000015,7.73e-42,25;UBERON:0002423,7.73e-42,25;UBERON:0006235,7.73e-42,25;UBERON:0004161,7.73e-42,25;UBERON:0009856,3.23e-40,26;UBERON:0002365,1.12e-33,31;UBERON:0002330,1.12e-33,31;UBERON:0002368,8.69e-30,35;UBERON:0000949,4.36e-29,45;UBERON:0003929,3.67e-24,54;UBERON:0005172,3.71e-19,54;UBERON:0005173,3.71e-19,54;UBERON:0002530,1.71e-17,59;UBERON:0002417,3.42e-17,60;UBERON:0000916,3.42e-17,60;UBERON:0005911,1.06e-15,82;UBERON:0005177,1.29e-12,101;UBERON:0001041,1.09e-11,87;UBERON:0004921,1.33e-10,118;UBERON:0009569,6.05e-09,112;UBERON:0003914,1.55e-08,117;UBERON:0001007,1.70e-08,145;UBERON:0001555,1.70e-08,145;UBERON:0007026,1.70e-08,145;UBERON:0000490,2.26e-08,148;UBERON:0005256,3.70e-08,122;UBERON:0004119,1.25e-07,160;UBERON:0000925,1.25e-07,160;UBERON:0006595,1.25e-07,160|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0654895377488563,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,292.804130438429,89.437276717664,64.9868897349544,0,2.7057456479485,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.120859449591622,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,46.368455241475,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,45.0948805720772,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,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| ||
|DPIdataset=robustDPI | |||
|EntrezGene=213 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=399 | |||
|TSSclassifier=S | |||
|UniProt= | |||
|association_with_transcript=103bp_to_ENST00000486939_5end | |||
|coexpression_cluster_id=C5 | |||
|description=CAGE_peak_12_at_ALB_5end | |||
|id=chr4:74283826..74283880,+ | |||
|ontology_enrichment_celltype=CL:0000181!1.49e-31!12;CL:0000417!1.49e-31!12;CL:0000668!1.49e-31!12;CL:0000414!1.49e-31!12;CL:0000412!1.49e-31!12;CL:0000182!1.49e-31!12;CL:0000223!2.04e-09!59 | |||
|ontology_enrichment_celltype_v019=CL:0000182;2.58e-49;12 | |||
|ontology_enrichment_celltype_v019_2=CL:0000182,2.58e-49,12;CL:0000223,1.34e-13,58 | |||
|ontology_enrichment_development_v019=UBERON:0004161;1.86e-37;11!UBERON:0009497;9.79e-32;13!UBERON:0001041;7.66e-14;30!UBERON:0003104;2.25e-13;31!CL:0000223;3.46e-10;58 | |||
|ontology_enrichment_disease=DOID:178!4.54e-09!1;DOID:326!4.54e-09!1;DOID:3978!4.54e-09!1;DOID:3394!4.54e-09!1;DOID:5844!4.54e-09!1 | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0005057!1.67e-34!26;UBERON:0009854!1.02e-32!23;UBERON:0002107!1.76e-32!19;UBERON:0006925!1.76e-32!19;UBERON:0008836!1.76e-32!19;UBERON:0009856!9.25e-29!26;UBERON:0008835!7.11e-28!22;UBERON:0003894!7.11e-28!22;UBERON:0002368!3.77e-25!35;UBERON:0007499!2.27e-24!25;UBERON:0009497!2.27e-24!25;UBERON:0000015!2.27e-24!25;UBERON:0002423!2.27e-24!25;UBERON:0006235!2.27e-24!25;UBERON:0004161!2.27e-24!25;UBERON:0000949!7.09e-23!45;UBERON:0003929!5.13e-22!54;UBERON:0002365!2.15e-19!31;UBERON:0002330!2.15e-19!31;UBERON:0002530!6.89e-17!59;UBERON:0005172!2.10e-15!55;UBERON:0005173!2.10e-15!55;UBERON:0002417!1.06e-13!61;UBERON:0000916!1.06e-13!61;UBERON:0005911!1.07e-13!82;UBERON:0004921!1.11e-10!129;UBERON:0004185!1.11e-10!129;UBERON:0001007!9.49e-10!155;UBERON:0001555!9.49e-10!155;UBERON:0007026!9.49e-10!155;UBERON:0001041!2.31e-09!98;UBERON:0000077!3.75e-09!130;UBERON:0002146!4.19e-09!1;UBERON:0005623!4.19e-09!1;UBERON:0001301!4.91e-09!1;UBERON:0001154!5.75e-09!1;UBERON:0001153!5.75e-09!1;UBERON:0002336!8.49e-09!1;UBERON:0001018!8.49e-09!1;UBERON:0002473!8.49e-09!1;UBERON:0005340!8.49e-09!1;UBERON:0002316!8.49e-09!1;UBERON:0003544!8.49e-09!1;UBERON:0001020!8.49e-09!1;UBERON:0005970!8.49e-09!1;UBERON:0002437!8.49e-09!1;UBERON:0004119!1.06e-08!169;UBERON:0000925!1.06e-08!169;UBERON:0006595!1.06e-08!169;UBERON:0005177!1.96e-08!107;UBERON:0000466!3.85e-08!126;UBERON:0001048!1.27e-07!168;UBERON:0000490!3.42e-07!138 | |||
|ontology_enrichment_uberon_v019=UBERON:0002107;3.89e-55;19!UBERON:0006925;3.89e-55;19!UBERON:0002423;7.73e-42;25!UBERON:0002365;2.13e-32;31!UBERON:0002330;2.13e-32;31!UBERON:0002368;1.41e-28;33!UBERON:0000949;5.33e-25;43!UBERON:0005172;1.69e-12;52!UBERON:0005173;1.69e-12;52!UBERON:0002417;5.80e-11;58!UBERON:0000916;5.80e-11;58!UBERON:0002530;7.53e-11;57!UBERON:0001007;5.36e-10;81 | |||
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|short_description=p12@ALB | |||
}} |
Revision as of 11:35, 13 September 2013
Short description: | p12@ALB |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_12_at_ALB_5end |
Coexpression cluster: | C5_Hepatocyte_liver_hepatocellular_Intestinal_kidney_small_pancreas |
Association with transcript: | 103bp_to_ENST00000486939_5end |
EntrezGene: | ALB |
HGNC: | 399 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
hepatocyte | 2.58e-49 | 12 |
endodermal cell | 1.34e-13 | 58 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.