FFCP PHASE1:Hg19::chr3:191143312..191143322,+: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=NA|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript|HGNC=NA|TSSclassifier=N|UniProt=NA|association_with_transcript=NA|description=CAGE_peak_at_chr3:191143312..191143322,+|id=chr3:191143312..191143322,+|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019=CL:1000306;6.72e-08;4!CL:0002547;6.72e-08;4!CL:0002586;8.04e-07;3!CL:0000064;8.92e-07;3!CL:0000067;8.92e-07;3!CL:0005012;8.92e-07;3!CL:0002304;8.92e-07;3|ontology_enrichment_celltype_v019_2=CL:1000306,7.87e-08,4;CL:0002547,7.87e-08,4;CL:0000064,8.21e-07,3;CL:0000067,8.21e-07,3;CL:0005012,8.21e-07,3;CL:0002304,8.21e-07,3;CL:0002586,8.92e-07,3|ontology_enrichment_development_v019=|ontology_enrichment_disease=DOID:162!6.28e-09!235;DOID:14566!2.37e-08!239|ontology_enrichment_disease_v019=DOID:1036;2.26e-10;8!DOID:3119;6.35e-07;14|ontology_enrichment_disease_v019_2=DOID:1036,2.30e-10,8;DOID:162,2.99e-07,235;DOID:3119,6.24e-07,14;DOID:14566,6.91e-07,239|ontology_enrichment_uberon=UBERON:0003056!4.05e-25!61;UBERON:0003075!4.70e-24!86;UBERON:0007284!4.70e-24!86;UBERON:0002346!3.70e-23!90;UBERON:0001869!4.39e-22!32;UBERON:0001893!1.13e-21!34;UBERON:0002791!1.09e-20!33;UBERON:0002780!2.38e-20!41;UBERON:0001890!2.38e-20!41;UBERON:0006240!2.38e-20!41;UBERON:0003080!1.27e-19!42;UBERON:0002619!5.72e-19!22;UBERON:0002020!1.80e-18!34;UBERON:0003528!1.80e-18!34;UBERON:0001950!3.59e-17!20;UBERON:0000956!6.03e-16!25;UBERON:0000203!6.03e-16!25;UBERON:0000033!1.95e-14!123;UBERON:0001049!1.36e-13!57;UBERON:0005068!1.36e-13!57;UBERON:0006241!1.36e-13!57;UBERON:0007135!1.36e-13!57;UBERON:0000153!5.13e-13!129;UBERON:0007811!5.13e-13!129;UBERON:0005743!5.88e-13!86;UBERON:0002616!8.53e-13!59;UBERON:0000955!1.05e-12!69;UBERON:0006238!1.05e-12!69;UBERON:0000073!3.24e-12!94;UBERON:0001016!3.24e-12!94;UBERON:0004121!3.90e-11!169;UBERON:0000924!5.85e-11!173;UBERON:0006601!5.85e-11!173;UBERON:0001017!1.27e-10!82;UBERON:0007625!6.75e-10!11;UBERON:0007023!7.81e-10!115;UBERON:0000025!1.15e-08!194;UBERON:0000200!2.00e-08!6;UBERON:0000483!2.50e-08!309;UBERON:0000119!4.87e-08!312;UBERON:0002420!9.95e-08!9;UBERON:0007245!9.95e-08!9;UBERON:0010009!9.95e-08!9;UBERON:0010011!9.95e-08!9;UBERON:0000454!9.95e-08!9;UBERON:0000970!2.18e-07!20;UBERON:0002104!7.16e-07!21;UBERON:0000019!8.61e-07!19;UBERON:0000047!8.61e-07!19;UBERON:0004088!8.61e-07!19;UBERON:0003072!8.61e-07!19;UBERON:0003071!8.61e-07!19;UBERON:0004128!8.61e-07!19|ontology_enrichment_uberon_v019=UBERON:0002619;2.54e-27;22!UBERON:0001950;4.61e-27;20!UBERON:0001869;4.93e-26;32!UBERON:0001893;9.83e-25;34!UBERON:0002791;6.90e-24;32!UBERON:0000956;1.47e-23;25!UBERON:0000203;1.47e-23;25!UBERON:0003528;4.07e-22;34!UBERON:0002020;4.07e-22;34!UBERON:0002780;1.42e-14;41!UBERON:0001890;1.42e-14;41!UBERON:0007625;1.48e-13;11!UBERON:0000200;2.12e-13;6!UBERON:0000488;1.06e-08;4!UBERON:0000073;1.75e-08;53!UBERON:0002616;1.75e-08;53!UBERON:0000369;3.55e-08;4!UBERON:0002435;3.55e-08;4!UBERON:0000204;3.55e-08;4!UBERON:0001871;4.16e-08;6!UBERON:0004797;6.72e-08;4!UBERON:0000415;6.72e-08;4!UBERON:0007240;6.72e-08;4!UBERON:0005742;6.72e-08;4!UBERON:0005734;6.72e-08;4!UBERON:0004664;6.72e-08;4!UBERON:0004663;6.72e-08;4!UBERON:0001870;8.37e-08;3!UBERON:0002420;1.10e-07;9!UBERON:0007245;1.10e-07;9!UBERON:0010009;1.10e-07;9!UBERON:0010011;1.10e-07;9!UBERON:0000454;1.10e-07;9!UBERON:0001872;2.56e-07;5!UBERON:0002021;2.98e-07;5!UBERON:0000349;3.92e-07;5!UBERON:0000019;4.05e-07;19!UBERON:0000047;4.05e-07;19!UBERON:0004088;4.05e-07;19!UBERON:0010230;4.05e-07;19!UBERON:0000955;4.18e-07;68!UBERON:0001017;6.34e-07;75!UBERON:0001781;8.04e-07;3!UBERON:0001782;8.04e-07;3!UBERON:0001778;8.92e-07;3!UBERON:0001775;8.92e-07;3|ontology_enrichment_uberon_v019_2=UBERON:0001869,3.64e-29,32;UBERON:0002619,2.80e-27,22;UBERON:0001893,4.17e-27,34;UBERON:0001950,5.74e-27,20;UBERON:0003056,1.21e-26,61;UBERON:0002791,1.71e-26,32;UBERON:0003528,1.32e-24,34;UBERON:0002020,1.32e-24,34;UBERON:0000956,1.60e-23,25;UBERON:0000203,1.60e-23,25;UBERON:0003075,1.11e-21,82;UBERON:0007284,1.11e-21,82;UBERON:0002780,1.85e-21,41;UBERON:0001890,1.85e-21,41;UBERON:0003080,1.85e-21,41;UBERON:0006240,1.85e-21,41;UBERON:0002346,3.12e-20,86;UBERON:0010371,1.97e-17,104;UBERON:0010314,8.51e-16,132;UBERON:0000073,3.07e-15,53;UBERON:0002616,3.07e-15,53;UBERON:0001049,4.19e-14,56;UBERON:0005068,4.19e-14,56;UBERON:0006241,4.19e-14,56;UBERON:0007135,4.19e-14,56;UBERON:0007625,1.49e-13,11;UBERON:0000200,1.71e-13,6;UBERON:0000955,1.09e-12,68;UBERON:0006238,1.09e-12,68;UBERON:0001017,1.02e-10,81;UBERON:0001016,5.33e-10,89;UBERON:0004121,1.59e-09,171;UBERON:0000924,1.59e-09,171;UBERON:0006601,1.59e-09,171;UBERON:0004797,2.46e-09,7;UBERON:0007023,7.47e-09,114;UBERON:0000488,9.73e-09,4;UBERON:0000369,2.73e-08,4;UBERON:0002435,2.73e-08,4;UBERON:0000204,2.73e-08,4;UBERON:0010082,2.73e-08,4;UBERON:0001871,4.59e-08,6;UBERON:0000415,7.87e-08,4;UBERON:0007240,7.87e-08,4;UBERON:0005742,7.87e-08,4;UBERON:0005734,7.87e-08,4;UBERON:0004664,7.87e-08,4;UBERON:0004663,7.87e-08,4;UBERON:0001870,8.38e-08,3;UBERON:0002420,9.91e-08,9;UBERON:0007245,9.91e-08,9;UBERON:0010009,9.91e-08,9;UBERON:0010011,9.91e-08,9;UBERON:0000454,9.91e-08,9;UBERON:0001872,2.50e-07,5;UBERON:0002021,3.49e-07,5;UBERON:0000349,3.86e-07,5;UBERON:0001778,8.21e-07,3;UBERON:0001775,8.21e-07,3;UBERON:0001782,8.92e-07,3;UBERON:0005424,8.92e-07,3|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.672325146451775,0,0.730310090387373,0,0,0,0,0,0,0,0,0.246301768349837,0.0787107813136792,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.87613732627923,0.670700859703636,0.255725123687061,0,0,0,0,0,2.74150969775797,4.65631734671384,2.63504357079378,0.851363990735132,0.728590576585084,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.39293562831038,1.05927344650575,3.44203944898576,1.06400514659507,0,0,0,0,0.269421344139376,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.741800787835671,0,0,0,0,0,0.438977620880838,0,0.300476117813194,0.113432183160021,0,0,0,0.300091096084402,0,0,0,0,0,0.252433774244115,0,0,0.355009592516614,0,0,0,0,0,0,0,0.348581828608555,0,0,0,0,0,1.38134921352481,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.122988438543114,5.66173773985134,0.878002283269004,0,0,0,0,0,1.44331342025273,2.31860809950154,0.70445216541493,0,0,0,0,0.858486162094873,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,5.71179872101983,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.3080511260475,3.28014645699706,3.25378394664303,0.103041011647722,0,0,0,0,0,0,0,0,0.137836572484531,0,0,0.0852266274161009,0,0,0,0,0,2.32422774648643,0.31481234683064,0.6970372701606,0,0,0.869932992075073,0,0,0,0,0,0,0,0,0,0,0,0.117812402345686,0.202182481573316,0,0,0,0,0,0,0,2.26016233240486,0,0,0,0.578775534266688,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.31154620495167,0,9.06648799129817,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.06246791284767,14.7704878737255,0,0,0,0,0,95.9961727038651,13.038875960465,0,0,0,0,7.95318118213038,3.09472716103128,0.445234820091624,0,0,0.19924798825107,0,0,0,0.246169610922139,0,0,0,0,0,0,0,2.90799823828566,8.16359263824291,0,0,0,0,0,46.782671653869,0,3.10269035917318,0,4.68787486319889,2.65722415744152,1.4471572635049,0,0,0,6.58156191461918,0,0,0,0.797594390929008,0.23056390438806,0,0.325942115766024,0,0,0,0,0,0.831058409500782,27.2970749346789,23.9196291867642,26.0123459812556,17.8368508760734,20.5028186884688,0,0.652931232636591,0,0,0,0,0,0,0,0,0.134802265961354,0,0,0,0,0,0,0,0,0.63186579628488,0.450970258243478,0,0,0,0,0,0,0.277349346026277,0,0.195984794828755,0,0,37.8369271437556,0,0,0,0,0,0.451961481561065,0.548167698587004,12.3203059255854,10.2563489448524,0.195551382734803,0.320635281006135,0,1.19885765749278,0,0,3.60349495510126,0,0,0,0,0,0.101998217636322,0,0.600420288709789,0.547621515567972,0,0,0,2.23425921017803,0.458320848023367,2.15361907373044,0,0,0,0,0,0,0.0787831823072236,0.247247575143499,0.202210631562555,1.37798474120648,4.99572659188128,3.97614844904652,0.681017030557878,0,0,0,0,0,8.8694352720716,0,0.157611414598396,0.0524545881349981,0,0,0,0,0,0,0,0,0,0,1.31348033198942,0,2.94611437952327,0,0,0,0,0,0,0.106787412567695,0,0,0,0,0,0.638341257770182,0,0,0,0,23.7151685337854,13.2910226995048,34.1673541725497,7.88702863450949,0,0,0.124192805882767,0,0.874862855734746,0,8.27849467280405,1.17632909849086,0,0,0,0,0,0,0.251567901752575,0,3.8902811627477,0.756154618816195,0.310874401165561,0.443565449968902,1.11507737014592,0,0.155262956876259,0,0,0,0,0.380805212168795,1.62748293281865,0,0,0.464033759878494,0.398095888698616,0,0,0,0,0,0,0.521988583930423,0.226705925512272,0,40.8710296525801,0,0,0,2.47364804324233,0,1.68942440653073,0,0,0,9.67809053062115,0,0,0,10.8111250119316,31.2131594117224,5.07149096060705,0,0,11.5384036372746,0,2.76158925377761,0,0,0,0.862598491173454,0,9.61044816089722,0,0,0.123935764259002,0,0,0,0,0,0,3.27569047991944,8.5017945795351,3.19267718114303,9.84558548355624,0,2.07471757392654,12.7565760049162,0,0,0,0,0,0.381382095467167,1.3807198521202,0,0.526472298444801,4.43751151147744,0,0,8.51613971052503,0,3.37687923091973,17.1837181695046,7.85409826704499,3.17079050969534,0.546974809018219,0,0,0,0,0,0,0,0.455324382702595,0,0,0.171488009437418,0.135939465953663,2.95977481032821,0,0,0,2.98519620840404,3.92381028639305,0,0.215927591218621,0,0.929195074296532,0,4.30093273862063,0,0,0,0.17071847709395,0,0,0,0,0,0,0,0,0.559277158988962,22.2801030306602,0,0,0,0,0,0,64.6590019274447,0.118920090777569,0,0,18.5684297587008,0,0,16.9314226690148,0,0,0,0,0,0,0,0,0,0,15.5273743554904,0,0,0,0,0.315543124386369,4.35145537221854,0,0.5290268405154,0,0,0,0,0,0.126698501011437,0,0,0,0,1.51557396436479,2.14371304124943,0.829169439458779,0.103432995861895,0,0,0,0,0,0,0,0,0,0,0,0,0.0814032686109745,0,0,0,0,0.122241444182866,0.406896178315738,0,0,0|short_description=p@chr3:191143312..191143322,+}} | ||
|DPIdataset=robustDPI | |||
|EntrezGene=NA | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |||
|TSSclassifier=N | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|description=CAGE_peak_at_chr3:191143312..191143322,+ | |||
|id=chr3:191143312..191143322,+ | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019=CL:1000306;6.72e-08;4!CL:0002547;6.72e-08;4!CL:0002586;8.04e-07;3!CL:0000064;8.92e-07;3!CL:0000067;8.92e-07;3!CL:0005012;8.92e-07;3!CL:0002304;8.92e-07;3 | |||
|ontology_enrichment_celltype_v019_2=CL:1000306,7.87e-08,4;CL:0002547,7.87e-08,4;CL:0000064,8.21e-07,3;CL:0000067,8.21e-07,3;CL:0005012,8.21e-07,3;CL:0002304,8.21e-07,3;CL:0002586,8.92e-07,3 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease=DOID:162!6.28e-09!235;DOID:14566!2.37e-08!239 | |||
|ontology_enrichment_disease_v019=DOID:1036;2.26e-10;8!DOID:3119;6.35e-07;14 | |||
|ontology_enrichment_disease_v019_2=DOID:1036,2.30e-10,8;DOID:162,2.99e-07,235;DOID:3119,6.24e-07,14;DOID:14566,6.91e-07,239 | |||
|ontology_enrichment_uberon=UBERON:0003056!4.05e-25!61;UBERON:0003075!4.70e-24!86;UBERON:0007284!4.70e-24!86;UBERON:0002346!3.70e-23!90;UBERON:0001869!4.39e-22!32;UBERON:0001893!1.13e-21!34;UBERON:0002791!1.09e-20!33;UBERON:0002780!2.38e-20!41;UBERON:0001890!2.38e-20!41;UBERON:0006240!2.38e-20!41;UBERON:0003080!1.27e-19!42;UBERON:0002619!5.72e-19!22;UBERON:0002020!1.80e-18!34;UBERON:0003528!1.80e-18!34;UBERON:0001950!3.59e-17!20;UBERON:0000956!6.03e-16!25;UBERON:0000203!6.03e-16!25;UBERON:0000033!1.95e-14!123;UBERON:0001049!1.36e-13!57;UBERON:0005068!1.36e-13!57;UBERON:0006241!1.36e-13!57;UBERON:0007135!1.36e-13!57;UBERON:0000153!5.13e-13!129;UBERON:0007811!5.13e-13!129;UBERON:0005743!5.88e-13!86;UBERON:0002616!8.53e-13!59;UBERON:0000955!1.05e-12!69;UBERON:0006238!1.05e-12!69;UBERON:0000073!3.24e-12!94;UBERON:0001016!3.24e-12!94;UBERON:0004121!3.90e-11!169;UBERON:0000924!5.85e-11!173;UBERON:0006601!5.85e-11!173;UBERON:0001017!1.27e-10!82;UBERON:0007625!6.75e-10!11;UBERON:0007023!7.81e-10!115;UBERON:0000025!1.15e-08!194;UBERON:0000200!2.00e-08!6;UBERON:0000483!2.50e-08!309;UBERON:0000119!4.87e-08!312;UBERON:0002420!9.95e-08!9;UBERON:0007245!9.95e-08!9;UBERON:0010009!9.95e-08!9;UBERON:0010011!9.95e-08!9;UBERON:0000454!9.95e-08!9;UBERON:0000970!2.18e-07!20;UBERON:0002104!7.16e-07!21;UBERON:0000019!8.61e-07!19;UBERON:0000047!8.61e-07!19;UBERON:0004088!8.61e-07!19;UBERON:0003072!8.61e-07!19;UBERON:0003071!8.61e-07!19;UBERON:0004128!8.61e-07!19 | |||
|ontology_enrichment_uberon_v019=UBERON:0002619;2.54e-27;22!UBERON:0001950;4.61e-27;20!UBERON:0001869;4.93e-26;32!UBERON:0001893;9.83e-25;34!UBERON:0002791;6.90e-24;32!UBERON:0000956;1.47e-23;25!UBERON:0000203;1.47e-23;25!UBERON:0003528;4.07e-22;34!UBERON:0002020;4.07e-22;34!UBERON:0002780;1.42e-14;41!UBERON:0001890;1.42e-14;41!UBERON:0007625;1.48e-13;11!UBERON:0000200;2.12e-13;6!UBERON:0000488;1.06e-08;4!UBERON:0000073;1.75e-08;53!UBERON:0002616;1.75e-08;53!UBERON:0000369;3.55e-08;4!UBERON:0002435;3.55e-08;4!UBERON:0000204;3.55e-08;4!UBERON:0001871;4.16e-08;6!UBERON:0004797;6.72e-08;4!UBERON:0000415;6.72e-08;4!UBERON:0007240;6.72e-08;4!UBERON:0005742;6.72e-08;4!UBERON:0005734;6.72e-08;4!UBERON:0004664;6.72e-08;4!UBERON:0004663;6.72e-08;4!UBERON:0001870;8.37e-08;3!UBERON:0002420;1.10e-07;9!UBERON:0007245;1.10e-07;9!UBERON:0010009;1.10e-07;9!UBERON:0010011;1.10e-07;9!UBERON:0000454;1.10e-07;9!UBERON:0001872;2.56e-07;5!UBERON:0002021;2.98e-07;5!UBERON:0000349;3.92e-07;5!UBERON:0000019;4.05e-07;19!UBERON:0000047;4.05e-07;19!UBERON:0004088;4.05e-07;19!UBERON:0010230;4.05e-07;19!UBERON:0000955;4.18e-07;68!UBERON:0001017;6.34e-07;75!UBERON:0001781;8.04e-07;3!UBERON:0001782;8.04e-07;3!UBERON:0001778;8.92e-07;3!UBERON:0001775;8.92e-07;3 | |||
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|short_description=p@chr3:191143312..191143322,+ | |||
}} |
Revision as of 23:21, 12 September 2013
Short description: | p@chr3:191143312..191143322, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr3:191143312..191143322, + |
Coexpression cluster: | NA |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
fibroblast of tunica adventitia of artery | 7.87e-08 | 4 |
fibroblast of the aortic adventitia | 7.87e-08 | 4 |
ciliated cell | 8.21e-07 | 3 |
ciliated epithelial cell | 8.21e-07 | 3 |
multi-ciliated epithelial cell | 8.21e-07 | 3 |
non-pigmented ciliary epithelial cell | 8.21e-07 | 3 |
retinal pigment epithelial cell | 8.92e-07 | 3 |
Ontology term | p-value | n |
---|---|---|
chronic leukemia | 2.30e-10 | 8 |
cancer | 2.99e-07 | 235 |
gastrointestinal system cancer | 6.24e-07 | 14 |
disease of cellular proliferation | 6.91e-07 | 239 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.