FFCP PHASE1:Hg19::chr3:171395628..171395647,-: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=5337|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding|HGNC=9067|TSSclassifier=S|UniProt=|association_with_transcript=0bp_to_ENST00000471075,uc003fhv.1_5end|coexpression_cluster_id=C2435|description=CAGE_peak_8_at_PLD1_5end|id=chr3:171395628..171395647,-|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019=CL:0002231;9.64e-07;3|ontology_enrichment_celltype_v019_2=|ontology_enrichment_development_v019=UBERON:0003104;4.00e-09;31!UBERON:0003918;1.27e-07;10!UBERON:0007687;1.27e-07;10!UBERON:0004161;7.15e-07;11|ontology_enrichment_disease=DOID:3493!8.60e-08!2|ontology_enrichment_disease_v019=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0000160!9.22e-12!27;UBERON:0005409!3.87e-09!35;UBERON:0002108!1.78e-08!14;UBERON:0004921!3.03e-07!129;UBERON:0004185!3.03e-07!129;UBERON:0002107!7.64e-07!19;UBERON:0006925!7.64e-07!19;UBERON:0008836!7.64e-07!19|ontology_enrichment_uberon_v019=UBERON:0002108;5.01e-14;4!UBERON:0000160;7.35e-09;17!UBERON:0002107;2.14e-08;19!UBERON:0006925;2.14e-08;19!UBERON:0005409;4.73e-07;22!UBERON:0002114;9.64e-07;2|ontology_enrichment_uberon_v019_2=UBERON:0002108,4.11e-14,4;UBERON:0000160,6.68e-09,17;UBERON:0002107,2.20e-08,19;UBERON:0006925,2.20e-08,19;UBERON:0008836,2.20e-08,19;UBERON:0005172,1.11e-07,54;UBERON:0005173,1.11e-07,54;UBERON:0008835,2.58e-07,22;UBERON:0003894,2.58e-07,22;UBERON:0009854,5.09e-07,23;UBERON:0002417,6.54e-07,60;UBERON:0000916,6.54e-07,60;UBERON:0002114,8.62e-07,2|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.20898734969396,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.80265104465493,0,0,0,0.737930631258681,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.0877350463246,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,8.3463219434655,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,8.75537347224046,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,7.94339188413713,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,7.25012507152623,3.61936658131487,0,0,0,0,0,0,0,0,0,0,0,0,0,1.02586563574658,1.32506888912221,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.731507549893617,0,0,0,0,0,0,0,0,0,0,0.0771741581079447,1.5299169235277,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.5870805215462,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0|short_description=p8@PLD1}} | ||
|DPIdataset=robustDPI | |||
|EntrezGene=5337 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=9067 | |||
|TSSclassifier=S | |||
|UniProt= | |||
|association_with_transcript=0bp_to_ENST00000471075,uc003fhv.1_5end | |||
|coexpression_cluster_id=C2435 | |||
|description=CAGE_peak_8_at_PLD1_5end | |||
|id=chr3:171395628..171395647,- | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019=CL:0002231;9.64e-07;3 | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019=UBERON:0003104;4.00e-09;31!UBERON:0003918;1.27e-07;10!UBERON:0007687;1.27e-07;10!UBERON:0004161;7.15e-07;11 | |||
|ontology_enrichment_disease=DOID:3493!8.60e-08!2 | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000160!9.22e-12!27;UBERON:0005409!3.87e-09!35;UBERON:0002108!1.78e-08!14;UBERON:0004921!3.03e-07!129;UBERON:0004185!3.03e-07!129;UBERON:0002107!7.64e-07!19;UBERON:0006925!7.64e-07!19;UBERON:0008836!7.64e-07!19 | |||
|ontology_enrichment_uberon_v019=UBERON:0002108;5.01e-14;4!UBERON:0000160;7.35e-09;17!UBERON:0002107;2.14e-08;19!UBERON:0006925;2.14e-08;19!UBERON:0005409;4.73e-07;22!UBERON:0002114;9.64e-07;2 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002108,4.11e-14,4;UBERON:0000160,6.68e-09,17;UBERON:0002107,2.20e-08,19;UBERON:0006925,2.20e-08,19;UBERON:0008836,2.20e-08,19;UBERON:0005172,1.11e-07,54;UBERON:0005173,1.11e-07,54;UBERON:0008835,2.58e-07,22;UBERON:0003894,2.58e-07,22;UBERON:0009854,5.09e-07,23;UBERON:0002417,6.54e-07,60;UBERON:0000916,6.54e-07,60;UBERON:0002114,8.62e-07,2 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.20898734969396,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.80265104465493,0,0,0,0.737930631258681,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.0877350463246,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,8.3463219434655,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,8.75537347224046,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,7.94339188413713,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,7.25012507152623,3.61936658131487,0,0,0,0,0,0,0,0,0,0,0,0,0,1.02586563574658,1.32506888912221,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.731507549893617,0,0,0,0,0,0,0,0,0,0,0.0771741581079447,1.5299169235277,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.5870805215462,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | |||
|short_description=p8@PLD1 | |||
}} |
Revision as of 22:43, 12 September 2013
Short description: | p8@PLD1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_8_at_PLD1_5end |
Coexpression cluster: | C2435_kidney_colon_small_temporal_duodenum_Hepatocyte_Intestinal |
Association with transcript: | 0bp_to_ENST00000471075, uc003fhv.1_5end |
EntrezGene: | PLD1 |
HGNC: | 9067 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
small intestine | 4.11e-14 | 4 |
intestine | 6.68e-09 | 17 |
liver | 2.20e-08 | 19 |
digestive gland | 2.20e-08 | 19 |
liver bud | 2.20e-08 | 19 |
abdomen element | 1.11e-07 | 54 |
abdominal segment element | 1.11e-07 | 54 |
hepatic diverticulum | 2.58e-07 | 22 |
liver primordium | 2.58e-07 | 22 |
digestive tract diverticulum | 5.09e-07 | 23 |
abdominal segment of trunk | 6.54e-07 | 60 |
abdomen | 6.54e-07 | 60 |
duodenum | 8.62e-07 | 2 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.