FFCP PHASE1:Hg19::chr3:55521543..55521588,-: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=7474|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding|HGNC=12784|TSSclassifier=S|UniProt=F5H611|association_with_transcript=81bp_to_ENST00000536765_5end|coexpression_cluster_id=C1080|description=CAGE_peak_7_at_WNT5A_5end|id=chr3:55521543..55521588,-|ontology_enrichment_celltype=CL:0000055!2.36e-18!180;CL:0000057!8.55e-12!75;CL:0002620!8.54e-08!23|ontology_enrichment_celltype_v019=CL:0000349;9.52e-10;19!CL:0002620;3.09e-09;23!CL:0000134;2.74e-08;55!CL:0000499;6.98e-08;28!CL:0000723;8.12e-08;61!CL:0000048;1.17e-07;58|ontology_enrichment_celltype_v019_2=CL:0000057,6.06e-13,76;CL:0000349,1.44e-09,19;CL:0002620,2.24e-09,23;CL:0000499,4.89e-08,28|ontology_enrichment_development_v019=|ontology_enrichment_disease=|ontology_enrichment_disease_v019=DOID:2394;8.24e-09;14!DOID:17;9.54e-07;5!DOID:450;9.54e-07;5!DOID:66;9.54e-07;5!DOID:423;9.54e-07;5!DOID:0080000;9.54e-07;5!DOID:11722;9.54e-07;5|ontology_enrichment_disease_v019_2=DOID:2394,7.31e-09,14|ontology_enrichment_uberon=UBERON:0000475!6.56e-10!365;UBERON:0000468!1.71e-07!659;UBERON:0003102!2.68e-07!95;UBERON:0005631!2.68e-07!14;UBERON:0000158!2.68e-07!14;UBERON:0000914!6.64e-07!83;UBERON:0002329!6.64e-07!83;UBERON:0003077!6.64e-07!83;UBERON:0003059!6.64e-07!83;UBERON:0007282!6.64e-07!83;UBERON:0009618!6.64e-07!83;UBERON:0007285!6.64e-07!83;UBERON:0000478!7.25e-07!24|ontology_enrichment_uberon_v019=UBERON:0000305;1.38e-08;7!UBERON:0000478;6.27e-08;24!UBERON:0005631;2.44e-07;10!UBERON:0000158;2.44e-07;10!UBERON:0002097;7.93e-07;41|ontology_enrichment_uberon_v019_2=UBERON:0002199,8.93e-10,46;UBERON:0002416,8.93e-10,46;UBERON:0003102,2.68e-09,99;UBERON:0005631,4.15e-09,14;UBERON:0000158,4.15e-09,14;UBERON:0004871,6.91e-09,8;UBERON:0002097,1.26e-08,41;UBERON:0000305,2.52e-08,7;UBERON:0000478,9.37e-08,24|phase1_expression=1.99846217197612,0.428201047781966,0.422863212287913,0,1.78784437770915,1.74467704820074,0,2.52687949370732,0.261185628199839,0.491467873003018,0,8.30077214094655,8.70431028153897,0.495065411840187,0.331397375727916,0,1.20538905604795,2.19093027116212,0.975865597581014,1.35433163884467,1.42800483870977,1.25381888591235,0.572471974262113,0.684372125364421,0.502170558379211,0,0,0,0,0,0,0,0,0,0.0774672005803016,0.142169232487422,0,0,0,0,0,0,0.77272670290256,0.145398238779565,0,0.242584061187816,0,0.411167888021826,0,0,0.256160706529101,0,0,0,0,0.564727018627814,0.272906150057846,0,0.306083892370903,0,0.639337125799041,0,0,0,0.580418477257168,2.8369261234557,0,0,0,0,0,0.368277635987565,0.316462387440884,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.670700859703636,0.12786256184353,10.1202962667679,8.52274448081012,5.79386075843295,4.7717156823066,2.91980922181582,1.13441780596881,1.55210578223795,1.40535657109002,0.392937226493138,0,0,2.59637914923747,3.13433527138681,0.797747763113191,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.132409180813219,0,0.354668382198357,0,0,0.24666754841716,0,0.942974704487816,0.490385709340376,1.21085942115945,0.576175924479999,0.468642863667593,0,0.570471821544449,1.34503812496621,0.23486899728753,0.161872944368132,0.140450806702248,1.02077085627447,0,1.44656093646072,29.7000714320513,27.6938960791984,0,1.43723628363248,0.336672227908132,0,1.93944880838928,4.82875382968922,11.6465362403627,12.9204730659673,0.567160915800105,2.33206526395521,11.3185416073841,8.05341224406335,3.30100205692843,8.86251751450575,3.34932702059318,4.83903826462134,1.5189869901714,0.68205903612839,3.02920529092937,12.7949359112796,1.77810662500693,3.19508633264953,3.62707553619505,2.03472710772585,0.57978255948989,0.545492241181669,0.573609190778008,0,0,0,0.10366105501537,0,0,4.69348596989448,0,4.14404764057442,2.3218396401599,3.60939740834793,0.709840800239063,0.674338760312407,0.241011029883482,0.882351781859152,0.871517776369625,1.18635309555548,0.404493924480493,0.392442930250692,0.38474715694639,0,0,2.4694440679884,1.47008711385542,1.26755034821831,0,0,0,0.368965315629341,2.40194934417936,0,0,0,0,0.325808305310325,0,4.3299402607582,0.579652024875384,3.75707821554629,0.144366447761074,0,0,0,0,0.246217006087397,0.234004265139238,0,0,1.00789276919316,0.425325291727159,0,0,0,0,0,0.207328115540772,0,0,0.190493682876507,0,0,0,0.102827492703324,0,0,0,2.1798003441664,0.2933531432838,2.06834745212444,0,4.22651376278,8.24408161413099,1.04007436911366,1.28603687131071,0,0.266422179016099,1.71573592389777,1.62786481617433,0,4.23457039581856,1.42156779497018,3.16780749173372,8.741741934728,6.97226766880235,4.59875759437462,0,0.502257091432126,0,0.718874566474748,0,7.13184525203592,2.02693829334611,1.2328579353023,4.65558504423729,0,0,0,0,0.508189248444927,0,0.773288812777695,0.670065061337395,1.27587750330633,0,0,0,0.12269149171914,0,0.542530047399471,1.66376689224646,1.07057393278297,3.15404830067869,3.27995961979597,0.300946099727719,0,1.03473071292505,1.32845119707087,1.10621501125022,1.99832313276591,0,0,0,0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| ||
|DPIdataset=robustDPI | |||
|EntrezGene=7474 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=12784 | |||
|TSSclassifier=S | |||
|UniProt=F5H611 | |||
|association_with_transcript=81bp_to_ENST00000536765_5end | |||
|coexpression_cluster_id=C1080 | |||
|description=CAGE_peak_7_at_WNT5A_5end | |||
|id=chr3:55521543..55521588,- | |||
|ontology_enrichment_celltype=CL:0000055!2.36e-18!180;CL:0000057!8.55e-12!75;CL:0002620!8.54e-08!23 | |||
|ontology_enrichment_celltype_v019=CL:0000349;9.52e-10;19!CL:0002620;3.09e-09;23!CL:0000134;2.74e-08;55!CL:0000499;6.98e-08;28!CL:0000723;8.12e-08;61!CL:0000048;1.17e-07;58 | |||
|ontology_enrichment_celltype_v019_2=CL:0000057,6.06e-13,76;CL:0000349,1.44e-09,19;CL:0002620,2.24e-09,23;CL:0000499,4.89e-08,28 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019=DOID:2394;8.24e-09;14!DOID:17;9.54e-07;5!DOID:450;9.54e-07;5!DOID:66;9.54e-07;5!DOID:423;9.54e-07;5!DOID:0080000;9.54e-07;5!DOID:11722;9.54e-07;5 | |||
|ontology_enrichment_disease_v019_2=DOID:2394,7.31e-09,14 | |||
|ontology_enrichment_uberon=UBERON:0000475!6.56e-10!365;UBERON:0000468!1.71e-07!659;UBERON:0003102!2.68e-07!95;UBERON:0005631!2.68e-07!14;UBERON:0000158!2.68e-07!14;UBERON:0000914!6.64e-07!83;UBERON:0002329!6.64e-07!83;UBERON:0003077!6.64e-07!83;UBERON:0003059!6.64e-07!83;UBERON:0007282!6.64e-07!83;UBERON:0009618!6.64e-07!83;UBERON:0007285!6.64e-07!83;UBERON:0000478!7.25e-07!24 | |||
|ontology_enrichment_uberon_v019=UBERON:0000305;1.38e-08;7!UBERON:0000478;6.27e-08;24!UBERON:0005631;2.44e-07;10!UBERON:0000158;2.44e-07;10!UBERON:0002097;7.93e-07;41 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002199,8.93e-10,46;UBERON:0002416,8.93e-10,46;UBERON:0003102,2.68e-09,99;UBERON:0005631,4.15e-09,14;UBERON:0000158,4.15e-09,14;UBERON:0004871,6.91e-09,8;UBERON:0002097,1.26e-08,41;UBERON:0000305,2.52e-08,7;UBERON:0000478,9.37e-08,24 | |||
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| |||
|short_description=p7@WNT5A | |||
}} |
Revision as of 00:56, 13 September 2013
Short description: | p7@WNT5A |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_7_at_WNT5A_5end |
Coexpression cluster: | C1080_Fibroblast_mesenchymal_neuroectodermal_Hair_Mesenchymal_Smooth_alveolar |
Association with transcript: | 81bp_to_ENST00000536765_5end |
EntrezGene: | WNT5A |
HGNC: | 12784 |
UniProt: | F5H611 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
fibroblast | 6.06e-13 | 76 |
extraembryonic cell | 1.44e-09 | 19 |
skin fibroblast | 2.24e-09 | 23 |
stromal cell | 4.89e-08 | 28 |
Ontology term | p-value | n |
---|---|---|
integument | 8.93e-10 | 46 |
integumental system | 8.93e-10 | 46 |
surface structure | 2.68e-09 | 99 |
extraembryonic membrane | 4.15e-09 | 14 |
membranous layer | 4.15e-09 | 14 |
somatic layer of lateral plate mesoderm | 6.91e-09 | 8 |
skin of body | 1.26e-08 | 41 |
amnion | 2.52e-08 | 7 |
extraembryonic structure | 9.37e-08 | 24 |
Ontology term | p-value | n |
---|---|---|
ovarian cancer | 7.31e-09 | 14 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.