FFCP PHASE1:Hg19::chr3:52020178..52020227,+: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=95|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding|HGNC=177|TSSclassifier=W|UniProt=|association_with_transcript=0bp_to_ENST00000464587_5end|coexpression_cluster_id=C25|description=CAGE_peak_3_at_ACY1_5end|id=chr3:52020178..52020227,+|ontology_enrichment_celltype=CL:0002322!2.46e-10!5;CL:0000990!3.37e-10!8;CL:0000451!2.32e-08!10;CL:0002563!8.51e-07!4|ontology_enrichment_celltype_v019=CL:0002563;3.20e-16;4!CL:0002253;6.42e-09;2|ontology_enrichment_celltype_v019_2=CL:0002563,3.32e-16,4;CL:0002253,6.42e-09,2|ontology_enrichment_development_v019=|ontology_enrichment_disease=|ontology_enrichment_disease_v019=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0005409!2.74e-28!35;UBERON:0000160!2.10e-27!27;UBERON:0000059!6.39e-25!11;UBERON:0004907!2.24e-18!5;UBERON:0004921!3.13e-16!129;UBERON:0004185!3.13e-16!129;UBERON:0001155!4.77e-16!9;UBERON:0001052!1.56e-13!4;UBERON:0001007!9.69e-13!155;UBERON:0001555!9.69e-13!155;UBERON:0007026!9.69e-13!155;UBERON:0004119!2.64e-11!169;UBERON:0000925!2.64e-11!169;UBERON:0006595!2.64e-11!169;UBERON:0009854!1.26e-10!23;UBERON:0009856!2.66e-09!26;UBERON:0008835!2.78e-08!22;UBERON:0003894!2.78e-08!22;UBERON:0001046!2.68e-07!19;UBERON:0007499!3.18e-07!25;UBERON:0009497!3.18e-07!25;UBERON:0000015!3.18e-07!25;UBERON:0002423!3.18e-07!25;UBERON:0006235!3.18e-07!25;UBERON:0004161!3.18e-07!25;UBERON:0002107!6.73e-07!19;UBERON:0006925!6.73e-07!19;UBERON:0008836!6.73e-07!19;UBERON:0003929!8.21e-07!54;UBERON:0001242!8.51e-07!4;UBERON:0001262!8.51e-07!4;UBERON:0004786!8.51e-07!4;UBERON:0004808!8.51e-07!4;UBERON:0001277!8.51e-07!4;UBERON:0001154!8.98e-07!1;UBERON:0001153!8.98e-07!1|ontology_enrichment_uberon_v019=UBERON:0000160;8.34e-54;17!UBERON:0005409;4.98e-42;22!UBERON:0002108;1.66e-28;4!UBERON:0001155;1.61e-27;9!UBERON:0004921;2.89e-26;33!UBERON:0000059;1.34e-22;11!UBERON:0001242;3.20e-16;4!UBERON:0001262;3.20e-16;4!UBERON:0004786;3.20e-16;4!UBERON:0004808;3.20e-16;4!UBERON:0001277;3.20e-16;4!UBERON:0001555;3.28e-10;54!UBERON:0000485;1.11e-09;7!UBERON:0003929;1.11e-09;7!UBERON:0003350;1.39e-08;8!UBERON:0001007;5.60e-08;81|ontology_enrichment_uberon_v019_2=UBERON:0000160,7.79e-54,17;UBERON:0005409,3.74e-37,25;UBERON:0002108,1.59e-28,4;UBERON:0001155,1.50e-27,9;UBERON:0000059,1.27e-22,11;UBERON:0001242,3.32e-16,4;UBERON:0001262,3.32e-16,4;UBERON:0004786,3.32e-16,4;UBERON:0004808,3.32e-16,4;UBERON:0001277,3.32e-16,4;UBERON:0004921,1.50e-14,118;UBERON:0001007,1.15e-11,145;UBERON:0001555,1.15e-11,145;UBERON:0007026,1.15e-11,145;UBERON:0004119,1.77e-10,160;UBERON:0000925,1.77e-10,160;UBERON:0006595,1.77e-10,160;UBERON:0011216,1.30e-08,223;UBERON:0003350,1.42e-08,8;UBERON:0000485,1.02e-07,9|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.982343066232845,0,0,0,0.696518949197069,0.797747763113191,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.116193942869518,0.207322110030741,0.756962552626885,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.44367627920718,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.1754700926492,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.37428108081644,0,0,0,0,0,0,0,0,0,0,0,0,0,0.276283915531148,0,0,0,0,0,0.179021174675609,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.82706142867882,0,2.98578579323551,20.1683247067613,4.888241159469,0.296521128680622,0,0,0,0,0,0,0,0,0,7.25944296291983,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.144090417154106,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.157566364614447,0.0824158583811665,0.13480708770837,0,0,0,0,0,0,0,0,0,0,0,0.394028536495991,0.262272940674991,0,0,0,0,0,0,0,0,0,0,0,0,0,0.146552233678082,1.32506888912221,0,0,1.88195521672762,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.584580926518165,1.19578356282027,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.840816489941367,0.913158720509496,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.853425474875886,0,0,0,0,0,0,0,0,0,0,51.7838600904309,15.0806096747731,0,0,0,0,0,0,0,0,0,0,0,0,0,0.730336388246517,0,0,0,0,0,3.7031878836078,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| ||
|DPIdataset=robustDPI | |||
|EntrezGene=95 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=177 | |||
|TSSclassifier=W | |||
|UniProt= | |||
|association_with_transcript=0bp_to_ENST00000464587_5end | |||
|coexpression_cluster_id=C25 | |||
|description=CAGE_peak_3_at_ACY1_5end | |||
|id=chr3:52020178..52020227,+ | |||
|ontology_enrichment_celltype=CL:0002322!2.46e-10!5;CL:0000990!3.37e-10!8;CL:0000451!2.32e-08!10;CL:0002563!8.51e-07!4 | |||
|ontology_enrichment_celltype_v019=CL:0002563;3.20e-16;4!CL:0002253;6.42e-09;2 | |||
|ontology_enrichment_celltype_v019_2=CL:0002563,3.32e-16,4;CL:0002253,6.42e-09,2 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0005409!2.74e-28!35;UBERON:0000160!2.10e-27!27;UBERON:0000059!6.39e-25!11;UBERON:0004907!2.24e-18!5;UBERON:0004921!3.13e-16!129;UBERON:0004185!3.13e-16!129;UBERON:0001155!4.77e-16!9;UBERON:0001052!1.56e-13!4;UBERON:0001007!9.69e-13!155;UBERON:0001555!9.69e-13!155;UBERON:0007026!9.69e-13!155;UBERON:0004119!2.64e-11!169;UBERON:0000925!2.64e-11!169;UBERON:0006595!2.64e-11!169;UBERON:0009854!1.26e-10!23;UBERON:0009856!2.66e-09!26;UBERON:0008835!2.78e-08!22;UBERON:0003894!2.78e-08!22;UBERON:0001046!2.68e-07!19;UBERON:0007499!3.18e-07!25;UBERON:0009497!3.18e-07!25;UBERON:0000015!3.18e-07!25;UBERON:0002423!3.18e-07!25;UBERON:0006235!3.18e-07!25;UBERON:0004161!3.18e-07!25;UBERON:0002107!6.73e-07!19;UBERON:0006925!6.73e-07!19;UBERON:0008836!6.73e-07!19;UBERON:0003929!8.21e-07!54;UBERON:0001242!8.51e-07!4;UBERON:0001262!8.51e-07!4;UBERON:0004786!8.51e-07!4;UBERON:0004808!8.51e-07!4;UBERON:0001277!8.51e-07!4;UBERON:0001154!8.98e-07!1;UBERON:0001153!8.98e-07!1 | |||
|ontology_enrichment_uberon_v019=UBERON:0000160;8.34e-54;17!UBERON:0005409;4.98e-42;22!UBERON:0002108;1.66e-28;4!UBERON:0001155;1.61e-27;9!UBERON:0004921;2.89e-26;33!UBERON:0000059;1.34e-22;11!UBERON:0001242;3.20e-16;4!UBERON:0001262;3.20e-16;4!UBERON:0004786;3.20e-16;4!UBERON:0004808;3.20e-16;4!UBERON:0001277;3.20e-16;4!UBERON:0001555;3.28e-10;54!UBERON:0000485;1.11e-09;7!UBERON:0003929;1.11e-09;7!UBERON:0003350;1.39e-08;8!UBERON:0001007;5.60e-08;81 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000160,7.79e-54,17;UBERON:0005409,3.74e-37,25;UBERON:0002108,1.59e-28,4;UBERON:0001155,1.50e-27,9;UBERON:0000059,1.27e-22,11;UBERON:0001242,3.32e-16,4;UBERON:0001262,3.32e-16,4;UBERON:0004786,3.32e-16,4;UBERON:0004808,3.32e-16,4;UBERON:0001277,3.32e-16,4;UBERON:0004921,1.50e-14,118;UBERON:0001007,1.15e-11,145;UBERON:0001555,1.15e-11,145;UBERON:0007026,1.15e-11,145;UBERON:0004119,1.77e-10,160;UBERON:0000925,1.77e-10,160;UBERON:0006595,1.77e-10,160;UBERON:0011216,1.30e-08,223;UBERON:0003350,1.42e-08,8;UBERON:0000485,1.02e-07,9 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.982343066232845,0,0,0,0.696518949197069,0.797747763113191,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.116193942869518,0.207322110030741,0.756962552626885,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.44367627920718,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.1754700926492,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.37428108081644,0,0,0,0,0,0,0,0,0,0,0,0,0,0.276283915531148,0,0,0,0,0,0.179021174675609,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.82706142867882,0,2.98578579323551,20.1683247067613,4.888241159469,0.296521128680622,0,0,0,0,0,0,0,0,0,7.25944296291983,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.144090417154106,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.157566364614447,0.0824158583811665,0.13480708770837,0,0,0,0,0,0,0,0,0,0,0,0.394028536495991,0.262272940674991,0,0,0,0,0,0,0,0,0,0,0,0,0,0.146552233678082,1.32506888912221,0,0,1.88195521672762,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.584580926518165,1.19578356282027,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.840816489941367,0.913158720509496,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.853425474875886,0,0,0,0,0,0,0,0,0,0,51.7838600904309,15.0806096747731,0,0,0,0,0,0,0,0,0,0,0,0,0,0.730336388246517,0,0,0,0,0,3.7031878836078,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.179650404213174,0,0,0,0,0,0 | |||
|short_description=p3@ACY1 | |||
}} |
Revision as of 00:46, 13 September 2013
Short description: | p3@ACY1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_3_at_ACY1_5end |
Coexpression cluster: | C25_small_colon_temporal_duodenum_liver_Hepatocyte_gall |
Association with transcript: | 0bp_to_ENST00000464587_5end |
EntrezGene: | ACY1 |
HGNC: | 177 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
intestinal epithelial cell | 3.32e-16 | 4 |
epithelial cell of large intestine | 6.42e-09 | 2 |
Ontology term | p-value | n |
---|---|---|
intestine | 7.79e-54 | 17 |
gastrointestinal system | 3.74e-37 | 25 |
small intestine | 1.59e-28 | 4 |
colon | 1.50e-27 | 9 |
large intestine | 1.27e-22 | 11 |
intestinal mucosa | 3.32e-16 | 4 |
wall of intestine | 3.32e-16 | 4 |
gastrointestinal system mucosa | 3.32e-16 | 4 |
gastrointestinal system epithelium | 3.32e-16 | 4 |
intestinal epithelium | 3.32e-16 | 4 |
subdivision of digestive tract | 1.50e-14 | 118 |
digestive system | 1.15e-11 | 145 |
digestive tract | 1.15e-11 | 145 |
primitive gut | 1.15e-11 | 145 |
endoderm-derived structure | 1.77e-10 | 160 |
endoderm | 1.77e-10 | 160 |
presumptive endoderm | 1.77e-10 | 160 |
organ system subdivision | 1.30e-08 | 223 |
epithelium of mucosa | 1.42e-08 | 8 |
simple columnar epithelium | 1.02e-07 | 9 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.